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CaUC01G022280 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G022280
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr01:34599237..34599722
RNA-Seq ExpressionCaUC01G022280
SyntenyCaUC01G022280
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE7995591.1 hypothetical protein FH972_000371 [Carpinus fangiana]9.2e-0860Show/hide
Query:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGR
        M G R   INGGN  R++S R IPKRG+VK+AI++G+ HSV+SIFS  GR
Subjt:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGR

KAG2689810.1 hypothetical protein I3760_09G156900 [Carya illinoinensis]3.5e-0766.67Show/hide
Query:  AGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFS
        AG R   INGG+FS ++S R IPKRGQVK+ I+VG+AHSV SIFS
Subjt:  AGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFS

KAG2689814.1 hypothetical protein I3760_09G157300 [Carya illinoinensis]2.0e-0766.67Show/hide
Query:  AGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFS
        +G R   +NGGNFS + S R IPKRGQVK+ I+VG+AHSVTSIFS
Subjt:  AGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFS

KAG6603714.1 hypothetical protein SDJN03_04323, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1465.62Show/hide
Query:  LALLKRKGQISAVMAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGRK
        ++++   G     MAG  I AINGG+ SRKYSDRLIPKRGQV M I+ GIAHSVTS+FSHGGRK
Subjt:  LALLKRKGQISAVMAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGRK

KAG6696678.1 hypothetical protein I3842_09G160300 [Carya illinoinensis]1.6e-0768.89Show/hide
Query:  AGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFS
        +G R   INGGNFS + S R IPKRGQVK+ I+VG+AHSVTSIFS
Subjt:  AGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFS

TrEMBL top hitse value%identityAlignment
A0A0A0KLE0 Uncharacterized protein1.3e-1588.24Show/hide
Query:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGRK
        MAGTRINAIN GN SRK SDRLIPKRGQVK+ IIVGIAHSVTSIFSHG RK
Subjt:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGRK

A0A5D2IZM4 Uncharacterized protein2.2e-0758.82Show/hide
Query:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGRK
        MAG R   INGGN SR+ + R IP+RGQVK+AI+ GIAHS  SIF+   R+
Subjt:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGRK

A0A5N6QAY6 Uncharacterized protein4.4e-0860Show/hide
Query:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGR
        M G R   INGGN  R++S R IPKRG+VK+AI++G+ HSV+SIFS  GR
Subjt:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGR

F6GYY0 Uncharacterized protein2.8e-1068.63Show/hide
Query:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGRK
        MAG R   INGGNFS+++S R IPKRGQVK+ I+VG+AHSV SIFS GGR+
Subjt:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGRK

F6GYY1 Uncharacterized protein1.1e-0968.63Show/hide
Query:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGRK
        MAG R + INGG+FS+++S R IPKRGQVK+AI VG AHSV SIFS GGR+
Subjt:  MAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCACTGGCTCTACTAAAGAGAAAAGGTCAAATTTCTGCAGTAATGGCCGGTACCAGGATCAACGCGATCAACGGTGGAAATTTTTCGAGGAAATATTCTGACCG
TCTGATTCCAAAACGGGGTCAGGTGAAAATGGCGATCATAGTGGGTATTGCTCACTCAGTGACTTCGATCTTCTCTCACGGCGGCCGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGTCACTGGCTCTACTAAAGAGAAAAGGTCAAATTTCTGCAGTAATGGCCGGTACCAGGATCAACGCGATCAACGGTGGAAATTTTTCGAGGAAATATTCTGACCG
TCTGATTCCAAAACGGGGTCAGGTGAAAATGGCGATCATAGTGGGTATTGCTCACTCAGTGACTTCGATCTTCTCTCACGGCGGCCGGAAATGA
Protein sequenceShow/hide protein sequence
MTSLALLKRKGQISAVMAGTRINAINGGNFSRKYSDRLIPKRGQVKMAIIVGIAHSVTSIFSHGGRK