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CaUC01G022860 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G022860
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionF-box domain-containing protein
Genome locationCiama_Chr01:35088994..35089272
RNA-Seq ExpressionCaUC01G022860
SyntenyCaUC01G022860
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034606.1 hypothetical protein SDJN02_04336 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-0980.95Show/hide
Query:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLRYPPIF
        MALEL VLGCTGVV+FLHGANFFFHALW  FTVR LR+ P+F
Subjt:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLRYPPIF
KAG8634527.1 hypothetical protein MANES_17G048550v8 [Manihot esculenta]1.3e-0473.68Show/hide
Query:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLRY
        MA+ELFVLGCTGVV+FLHGANFFFHAL     VR L +
Subjt:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLRY
PON37879.1 hypothetical protein PanWU01x14_317000 [Parasponia andersonii]1.7e-0474.29Show/hide
Query:  LELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
        +ELF+LGCTG+VVFLHGANFFFHAL    T+R LR
Subjt:  LELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
PON61367.1 hypothetical protein TorRG33x02_281910 [Trema orientale]1.7e-0474.29Show/hide
Query:  LELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
        +ELF+LGCTG+VVFLHGANFFFHAL    T+R LR
Subjt:  LELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
TYI04626.1 hypothetical protein ES332_A10G032800v1 [Gossypium tomentosum]1.7e-0475.68Show/hide
Query:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
        M +ELFVLGCTGVVVFLHGANFFFH L     VR LR
Subjt:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
TrEMBL top hitse value%identityAlignment
A0A2P5AMV0 Uncharacterized protein8.2e-0574.29Show/hide
Query:  LELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
        +ELF+LGCTG+VVFLHGANFFFHAL    T+R LR
Subjt:  LELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
A0A2P5CJZ9 Uncharacterized protein8.2e-0574.29Show/hide
Query:  LELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
        +ELF+LGCTG+VVFLHGANFFFHAL    T+R LR
Subjt:  LELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
A0A5D2AZA5 Uncharacterized protein2.4e-0471.05Show/hide
Query:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLRY
        M +ELFVLGCTGVVVFLHGANFFFH L     VR L +
Subjt:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLRY
A0A5D2NLM3 Uncharacterized protein8.2e-0575.68Show/hide
Query:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
        M +ELFVLGCTGVVVFLHGANFFFH L     VR LR
Subjt:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLR
A0A5J5TXY1 Uncharacterized protein2.4e-0471.05Show/hide
Query:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLRY
        M +ELFVLGCTGVVVFLHGANFFFH L     VR L +
Subjt:  MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLRY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGGAGCTTTTCGTCTTGGGCTGCACCGGCGTTGTCGTCTTCCTCCATGGAGCCAATTTCTTCTTCCACGCTCTCTGGCACCCTTTCACCGTCCGATTT
CTCAGGTATCCTCCTATTTTCTTCCATTCATTTAGGGCGTTTTCCTCTGTTCCTGAACACCACGCTCTATTCAATTCTTCACCCTCCTCTTCTATTCTCTCTTTC
CCATTTTTCTGTGATTCTGCTAAACCTAATTACTCGAATTTTGATGAATGCTTGAGTTTCATCGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGGAGCTTTTCGTCTTGGGCTGCACCGGCGTTGTCGTCTTCCTCCATGGAGCCAATTTCTTCTTCCACGCTCTCTGGCACCCTTTCACCGTCCGATTT
CTCAGGTATCCTCCTATTTTCTTCCATTCATTTAGGGCGTTTTCCTCTGTTCCTGAACACCACGCTCTATTCAATTCTTCACCCTCCTCTTCTATTCTCTCTTTC
CCATTTTTCTGTGATTCTGCTAAACCTAATTACTCGAATTTTGATGAATGCTTGAGTTTCATCGGCTAA
Protein sequenceShow/hide protein sequence
MALELFVLGCTGVVVFLHGANFFFHALWHPFTVRFLRYPPIFFHSFRAFSSVPEHHALFNSSPSSSILSFPFFCDSAKPNYSNFDECLSFIG