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CaUC01G024280 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G024280
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionVQ domain-containing protein
Genome locationCiama_Chr01:36269902..36270216
RNA-Seq ExpressionCaUC01G024280
SyntenyCaUC01G024280
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039608 - VQ motif-containing protein 1/10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052539.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa]1.8e-2671.29Show/hide
Query:  NSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNGGRRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNWIWT
        N KK A EVRVV+IE HHIQTD SNFKSVVQSLTGK SS  + GGE CRKRQRVVA NN        +S KMI T SFKDLD LLSL LPSMEDL+WI T
Subjt:  NSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNGGRRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNWIWT

Query:  D
        D
Subjt:  D

KAG6581431.1 hypothetical protein SDJN03_21433, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2356.73Show/hide
Query:  MANNSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNGGRRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNW
        MA++    AG V+VV+IE HH+ TDVSNFKSVVQ+LTGK SSAV+GGG +C KR RV  E ++        +   + +TSFKDLD  L+LHLP++EDLNW
Subjt:  MANNSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNGGRRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNW

Query:  IWTD
        IW D
Subjt:  IWTD

KAG7034723.1 hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2356.73Show/hide
Query:  MANNSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNGGRRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNW
        MA++    AG V+VV+IE HH+ TDVS+FKSVVQ+LTGK SSAV+GGG +CRKR RV  E ++        +   + +TSFKDLD  L+LHLP++EDLNW
Subjt:  MANNSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNGGRRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNW

Query:  IWTD
        IW D
Subjt:  IWTD

KGN49401.1 hypothetical protein Csa_003856 [Cucumis sativus]3.7e-2468.93Show/hide
Query:  NSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQ-GGGESCRKRQRVVAENNFNGG-RRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNWI
        NSKK A EVRVV+IE HHIQTD SNFKSVVQSLTGK S A +  GGE CRKRQRVV++NN +       +  KMI T SFKDLD LL+L LPSMEDLNWI
Subjt:  NSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQ-GGGESCRKRQRVVAENNFNGG-RRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNWI

Query:  WTD
         TD
Subjt:  WTD

XP_038881537.1 VQ motif-containing protein 10-like [Benincasa hispida]2.2e-4081.08Show/hide
Query:  MANNSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENN-------FNGGRRFEESRKMIPTTSFKDLDGLLSLHLP
        M N+ K    EVRVVVIE HHIQTDVSNFKSVVQSLTGK SSAV+GGGESC+KRQRVVAENN       FN GRR+EESRKMIPTTSFKDLD LLSLHLP
Subjt:  MANNSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENN-------FNGGRRFEESRKMIPTTSFKDLDGLLSLHLP

Query:  SMEDLNWIWTD
        SMEDLNWIWTD
Subjt:  SMEDLNWIWTD

TrEMBL top hitse value%identityAlignment
A0A0A0KNW8 VQ domain-containing protein1.8e-2468.93Show/hide
Query:  NSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQ-GGGESCRKRQRVVAENNFNGG-RRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNWI
        NSKK A EVRVV+IE HHIQTD SNFKSVVQSLTGK S A +  GGE CRKRQRVV++NN +       +  KMI T SFKDLD LL+L LPSMEDLNWI
Subjt:  NSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQ-GGGESCRKRQRVVAENNFNGG-RRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNWI

Query:  WTD
         TD
Subjt:  WTD

A0A5D3CN21 VQ motif-containing protein 1-like8.6e-2771.29Show/hide
Query:  NSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNGGRRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNWIWT
        N KK A EVRVV+IE HHIQTD SNFKSVVQSLTGK SS  + GGE CRKRQRVVA NN        +S KMI T SFKDLD LLSL LPSMEDL+WI T
Subjt:  NSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNGGRRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNWIWT

Query:  D
        D
Subjt:  D

A0A6J1CYB0 uncharacterized protein LOC1110157001.7e-1147.57Show/hide
Query:  VRVVVIECHHIQTDVSNFKSVVQSLTG---KKSSAVQG----GGESCRKRQR---VVAENNFNGGRRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNWI
        V+VV+IE HH+QTDVSNFKSVVQSLTG   + SSA+       G++ ++R+R     A N          +   + T SFKDLD LL  +LPS++DL+WI
Subjt:  VRVVVIECHHIQTDVSNFKSVVQSLTG---KKSSAVQG----GGESCRKRQR---VVAENNFNGGRRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNWI

Query:  WTD
        W D
Subjt:  WTD

A0A6J1EF02 VQ motif-containing protein 10-like1.1e-1656.14Show/hide
Query:  MANNSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNG-GRRFEESRKMIPT--------TSFKDLDG-LLSL
        MAN+  K AG V+VV IE HHIQTDV+NFKSVVQ+LTG  S+A   GG + +KR+  V EN  +    RFEES +   T        TSF+DLD  LL L
Subjt:  MANNSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNG-GRRFEESRKMIPT--------TSFKDLDG-LLSL

Query:  HLPSMEDLNWIWTD
         LPSMEDLNWIW D
Subjt:  HLPSMEDLNWIWTD

A0A6J1KT83 VQ motif-containing protein 101.4e-1654.87Show/hide
Query:  MANNSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNGGRRFEES--------RKMIPTTSFKDLDG-LLSLH
        MAN+  K AG V+VV IE HHIQTDVSNFKSVVQ+LTG  S+A    G + RK+ RV          RFEES           + +TSF+DLD  LL L 
Subjt:  MANNSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNGGRRFEES--------RKMIPTTSFKDLDG-LLSLH

Query:  LPSMEDLNWIWTD
        LPSMEDLNWIW D
Subjt:  LPSMEDLNWIWTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATAATTCGAAGAAGGGGGCGGGGGAAGTGAGGGTGGTGGTAATTGAGTGCCACCATATTCAGACCGATGTTTCCAACTTCAAGTCCGTCGTTCAAAGTCTCAC
CGGAAAGAAGTCCTCCGCGGTGCAGGGCGGTGGAGAGAGCTGTAGAAAGAGGCAGCGAGTAGTGGCGGAGAATAATTTTAATGGCGGACGCCGGTTTGAAGAAAGTCGTA
AGATGATCCCCACGACGTCGTTTAAGGATTTGGATGGGTTGCTCAGCCTTCACCTTCCTTCCATGGAGGATCTCAACTGGATTTGGACTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATAATTCGAAGAAGGGGGCGGGGGAAGTGAGGGTGGTGGTAATTGAGTGCCACCATATTCAGACCGATGTTTCCAACTTCAAGTCCGTCGTTCAAAGTCTCAC
CGGAAAGAAGTCCTCCGCGGTGCAGGGCGGTGGAGAGAGCTGTAGAAAGAGGCAGCGAGTAGTGGCGGAGAATAATTTTAATGGCGGACGCCGGTTTGAAGAAAGTCGTA
AGATGATCCCCACGACGTCGTTTAAGGATTTGGATGGGTTGCTCAGCCTTCACCTTCCTTCCATGGAGGATCTCAACTGGATTTGGACTGACTAA
Protein sequenceShow/hide protein sequence
MANNSKKGAGEVRVVVIECHHIQTDVSNFKSVVQSLTGKKSSAVQGGGESCRKRQRVVAENNFNGGRRFEESRKMIPTTSFKDLDGLLSLHLPSMEDLNWIWTD