; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC01G024650 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G024650
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionF-box protein SKIP19-like
Genome locationCiama_Chr01:36606487..36608673
RNA-Seq ExpressionCaUC01G024650
SyntenyCaUC01G024650
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]1.3e-9161.94Show/hide
Query:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG
        MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV+DM   GD +DM +DLE MCR AVDRSCGQLI INIE+FG
Subjt:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG

Query:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL
        TD+LLQYIT+SSN+LR+LRL  C+ +SDEGL +AVS+LPLLE LEI   SFDV+TL+T+G+C PLLKSLKL   + +   +  ++ ALAIAE MP L HL
Subjt:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL

Query:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL
        QI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL  +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Subjt:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL

Query:  VDGNFLDYDD
           +F DY D
Subjt:  VDGNFLDYDD

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]4.1e-9361.83Show/hide
Query:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG
        MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV+DM   GD +DM +DLE MCR AVDRSCGQLI INIE+FG
Subjt:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG

Query:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL
        TD+LLQYIT+SSNQLR+LRL  C+ +SDEGL +AVS+LPLLE LEI   SFDV+TL+T+G+C PLLKSLKL   + +   +  ++ ALAIAE MP L HL
Subjt:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL

Query:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL
        QI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL  +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Subjt:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL

Query:  VDGNFLDYDDFTRIDYS
           +F DY DF  I+ S
Subjt:  VDGNFLDYDDFTRIDYS

XP_022146630.1 F-box protein SKIP19-like [Momordica charantia]4.8e-9463.87Show/hide
Query:  MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGT
        MESN    S  E RNWLELPA++ SMILLKLGAIEIL+SAQ+VCS WRKI KDPLMWRV+DMHN+G+ +DM +DLE MC  AVDRSCG+LIDINI+YFGT
Subjt:  MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGT

Query:  DELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQ
        +ELLQYIT+SSNQLRRLR+  C  ++D GL+EAVS+LPLLEHLEI + SF   TL+TVGRCC LLKSLKL  +      +  + +A+AIAE MP L +LQ
Subjt:  DELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQ

Query:  IIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDED-STDFSDI-----DGDSYDFLV
        I G+ LT+ GLQAILDGCPDLESLDL QCFNL+L GQL  ECAE++K L LPHD  TD  E   +T  FG  DS DED  + FSDI     D D Y++  
Subjt:  IIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDED-STDFSDI-----DGDSYDFLV

Query:  DGNFLDYDDF
          NF DY DF
Subjt:  DGNFLDYDDF

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]2.2e-9161.94Show/hide
Query:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG
        MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV+DM   GD +DM +DLE MCR AVDRSCGQLI INIE+FG
Subjt:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG

Query:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL
        TD+LL YIT+SSNQLR+LRL  C+ +SDEGL +AVS+LPLLE LEI   SFDV+TL+T+G+C PLLKSLKL   + +   +  ++ ALAIAE MP L HL
Subjt:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL

Query:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL
        QI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL  +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Subjt:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL

Query:  VDGNFLDYDD
           +F DY D
Subjt:  VDGNFLDYDD

XP_038883506.1 F-box protein SKIP19-like [Benincasa hispida]1.9e-15183.38Show/hide
Query:  MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGT
        MESNS IQSEAE RNWL+LPAEVMSMILLKLGAIEILTSAQNVC SWRKI KDPLMWRVIDM N G+ YDM HDLEIMCRHAVDRSCGQLIDINIEYFGT
Subjt:  MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGT

Query:  DELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQ
        DELLQYIT+SSNQLRRLRLADC ++SDEGLTEA+SRLPLLEHLEI I+SFDV+TLKTVGRCCPLLK LKL+EEQ W E MV+N+EALAIAETMPKL HLQ
Subjt:  DELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQ

Query:  IIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFSDIDGDSYDFLVDGNFLD
        IIGNGLTN+GLQAILDGCPDLESLDL QCF+LNL GQL KECAE+ KVL+LPHDR+T+G+ECT KT +FG  DSEDEDS DFS ID D YDFLVD +FLD
Subjt:  IIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFSDIDGDSYDFLVDGNFLD

Query:  YDDFTRIDYSDYEDFTRLGLFD-DDDFPEHY
        YDD TRI+YSDYEDFT+LGLFD DDD  E+Y
Subjt:  YDDFTRIDYSDYEDFTRLGLFD-DDDFPEHY

TrEMBL top hitse value%identityAlignment
A0A6J1CXS5 F-box protein SKIP19-like2.3e-9463.87Show/hide
Query:  MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGT
        MESN    S  E RNWLELPA++ SMILLKLGAIEIL+SAQ+VCS WRKI KDPLMWRV+DMHN+G+ +DM +DLE MC  AVDRSCG+LIDINI+YFGT
Subjt:  MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGT

Query:  DELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQ
        +ELLQYIT+SSNQLRRLR+  C  ++D GL+EAVS+LPLLEHLEI + SF   TL+TVGRCC LLKSLKL  +      +  + +A+AIAE MP L +LQ
Subjt:  DELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQ

Query:  IIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDED-STDFSDI-----DGDSYDFLV
        I G+ LT+ GLQAILDGCPDLESLDL QCFNL+L GQL  ECAE++K L LPHD  TD  E   +T  FG  DS DED  + FSDI     D D Y++  
Subjt:  IIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDED-STDFSDI-----DGDSYDFLV

Query:  DGNFLDYDDF
          NF DY DF
Subjt:  DGNFLDYDDF

A0A6J1CYW9 putative F-box/LRR-repeat protein 236.2e-8765.52Show/hide
Query:  MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGT
        MESNS   SE   RNWLELPA+  SMIL+KLGA++IL++AQ VCS WRKI  DPLMWRV+DM NL DS DM  DLE MC  AVDRSCGQL+DINIE FGT
Subjt:  MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGT

Query:  DELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIF--SFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVS-NEEALAIAETMPKLC
        DELL YI +SSNQLRRLRL  C ++S +GL EAV +LPLLE LEI     SFD++TLKTVGRCCPLL SLKL         ++  +EEALAIAE MP L 
Subjt:  DELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIF--SFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVS-NEEALAIAETMPKLC

Query:  HLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTD
        HL I  N LT++GLQAILDGCP LESLDL  C NLNL GQLEK+C++++K L LP+D + D
Subjt:  HLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTD

A0A6J1ECV6 F-box protein SKIP19-like isoform X12.4e-9161.94Show/hide
Query:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG
        MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV+DM   GD +DM +DLE MCR AVDRSCGQLI I IE+FG
Subjt:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG

Query:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL
        TD+LLQYIT+SSNQLR LRL  C+ +SDEGL +AVS+LPLLE LEI   SFDV+TL+T+G+C PLLKSLKL   + +   +  ++ ALAIAE MP L HL
Subjt:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL

Query:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL
        QI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL  +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Subjt:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL

Query:  VDGNFLDYDD
           +F DY D
Subjt:  VDGNFLDYDD

A0A6J1EGI8 F-box protein SKIP19-like isoform X25.4e-9162.01Show/hide
Query:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG
        MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV+DM   GD +DM +DLE MCR AVDRSCGQLI I IE+FG
Subjt:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG

Query:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL
        TD+LLQYIT+SSNQLR LRL  C+ +SDEGL +AVS+LPLLE LEI   SFDV+TL+T+G+C PLLKSLKL   + +   +  ++ ALAIAE MP L HL
Subjt:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL

Query:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL
        QI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL  +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Subjt:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL

Query:  VDGNFLDY
           +F DY
Subjt:  VDGNFLDY

A0A6J1ILH5 F-box protein SKIP19-like2.4e-9162.01Show/hide
Query:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG
        MESNS+  S   E RNWLELPA+V SMILLKLG ++ILT+AQ+VC SWRKI +DPLMWRV+DM   GD +DM +DLE MCR AVDRSCGQLI INIE+FG
Subjt:  MESNSTIQS-EAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFG

Query:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL
        TD+LLQYIT+SSNQLR+LRL  C+ +SDEG  +AVS+LPLLE LEI   SFDV+TL+T+G C PLLKSLKL   + +   +  ++ ALAIAE MP L HL
Subjt:  TDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHL

Query:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL
        QI GN LTN GL+AILDGCPDLESLDL QCFNLNLAGQL  +C+EK+K L LPHD  TD  E +T+   +G    ED         TD    D D Y+F 
Subjt:  QIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDE------DSTDFSDIDGDSYDFL

Query:  VDGNFLDY
           +F DY
Subjt:  VDGNFLDY

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 224.6e-6347.67Show/hide
Query:  IQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEY--FGTDELL
        ++ E +  NW ELP +++S ILL+L  +EIL +A+ VC SWR++ KDPL+WR IDM NL   Y +Y  +E  CRH VD S G L++ NI+   F T  LL
Subjt:  IQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEY--FGTDELL

Query:  QYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQIIGN
         Y+   S+ LRRLR+    +++  G+ EA+ +LPLLE LE+L  S + +  KT+G+ CP LK+LKLV    W+    S+ +ALAIA+TMP L HLQ+I N
Subjt:  QYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQIIGN

Query:  GLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFS
        GLTNIGL AILDGCP LE LDL QCFN+NL G LE++C E++K    P+D V D       + N    D + E+  ++S
Subjt:  GLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFS

Q9M0U7 Putative F-box protein At4g054756.4e-5746.56Show/hide
Query:  QSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYI
        + + E  NW++LP E+ + ILL+L   +IL +A+ +C +WR+I KDP MWR I   NL D      D E MCRH VD S G L++INIE+F +D LL YI
Subjt:  QSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYI

Query:  TRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVS----------NEEALAIAETMPKLC
           S  L+ L ++  + ++++G+   + +LPLLE L I   S  +D LK +G  CP LK+LKL    S   H +S          +++ALAIAE+MPKL 
Subjt:  TRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVS----------NEEALAIAETMPKLC

Query:  HLQIIGNGLTNIGLQAILDGCPDLES-LDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTD
        HLQ++GNGLTN GL AILDGCP LE  LD+ +CFN+NL G LEK C +++K L  PHD   D
Subjt:  HLQIIGNGLTNIGLQAILDGCPDLES-LDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTD

Q9M0U9 F-box protein SKIP191.2e-7652.7Show/hide
Query:  MESNSTIQSEAEV---RNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEY
        M S+S+  +  EV    NW ELP E+ S IL +LGAIEIL +AQ VC SWR++ KDP MWR IDMHNLGD  DM ++LEIMCRHAVDRS G L+DI I Y
Subjt:  MESNSTIQSEAEV---RNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEY

Query:  FGTDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLC
        FGT +LL YI   S+ LR LRL  C +++D+G  EAV +LP LE LE+   SF V++L+ VG+CC  +K+LKL +         ++++ALAIAETMPKL 
Subjt:  FGTDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLC

Query:  HLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFSDID---GDS-----
        HLQ+ GNGL++ GL AILD C +LE LDL +CFN+NL G L+K C E VKV+  P+D + D               SEDED  DFSDID   GD      
Subjt:  HLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFSDID---GDS-----

Query:  YDFLVDGNFLDYDDF
        YDF    +F DYD F
Subjt:  YDFLVDGNFLDYDDF

Q9S9V8 Putative F-box/LRR-repeat protein 99.6e-5348.93Show/hide
Query:  EVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDM---HNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYIT
        E RNW ELP E+ S ILL+LGAIEIL +AQ VC SWR++ +DP MWR ID+    NL +S ++++ +E +C  AVD S G L++INI+Y      L YI 
Subjt:  EVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDM---HNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYIT

Query:  RSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILI-FSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQIIGNGLT
          S+ LRRL + DC  V   G+ EA  +LPLLE L+I    S     LK VG+ CP L++LKL       +    ++ ALAIAETMP L HLQ+  NGL+
Subjt:  RSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILI-FSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQIIGNGLT

Query:  NIGLQAILDGCPDLESLDLHQCFNLNLAGQLEK
          GL AIL+GCP L++L LHQC N+N+ G + K
Subjt:  NIGLQAILDGCPDLESLDLHQCFNLNLAGQLEK

Q9S9V9 Putative F-box/LRR-repeat protein 233.3e-6949.64Show/hide
Query:  TIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQ
        ++  + ++RNW ELP+++ S ILL+LGAIEIL +AQ VC  W ++ KDP MWR ID+ N  D     +DLE MCRHAVDRS G LI+I I Y+GT++L+ 
Subjt:  TIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCS-WRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQ

Query:  YITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSN----EEALAIAETMPKLCHLQI
        YI   S+ L+ L L  C  ++DEG+ +AVS++PLLE+LE+    F  ++L+ +GR CP LK+LKL       E M SN    + A AIAE+MP+L HLQ+
Subjt:  YITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSN----EEALAIAETMPKLCHLQI

Query:  IGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTK--TTNFGARDSEDE
        +GNGLTN GL AILDGCP LE LDL QCFN+NL G L+K C E++K L  P+D   D ++ +     T FG++ +E +
Subjt:  IGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTK--TTNFGARDSEDE

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein8.8e-7852.7Show/hide
Query:  MESNSTIQSEAEV---RNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEY
        M S+S+  +  EV    NW ELP E+ S IL +LGAIEIL +AQ VC SWR++ KDP MWR IDMHNLGD  DM ++LEIMCRHAVDRS G L+DI I Y
Subjt:  MESNSTIQSEAEV---RNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEY

Query:  FGTDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLC
        FGT +LL YI   S+ LR LRL  C +++D+G  EAV +LP LE LE+   SF V++L+ VG+CC  +K+LKL +         ++++ALAIAETMPKL 
Subjt:  FGTDELLQYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLC

Query:  HLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFSDID---GDS-----
        HLQ+ GNGL++ GL AILD C +LE LDL +CFN+NL G L+K C E VKV+  P+D + D               SEDED  DFSDID   GD      
Subjt:  HLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFSDID---GDS-----

Query:  YDFLVDGNFLDYDDF
        YDF    +F DYD F
Subjt:  YDFLVDGNFLDYDDF

AT4G05470.1 RNI-like superfamily protein3.2e-5145.25Show/hide
Query:  EVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINI-EYFGTDELLQYITRS
        E RNW++LP E+ + ILL+L   +IL +AQ VC  WR+I KDP MWR I   N  D      D   MCRH VD S G L++IN+ E+F +D LL YIT  
Subjt:  EVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINI-EYFGTDELLQYITRS

Query:  SNQLRRLRLADC-DEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVE-EQSWTEH-------------MVSNEEALAIAETMPK
           LR L L  C   V+  G+  A++++PLLE LE+      +D LK +G  CP LK+LKL    + W                +  +++ALAIAE+MPK
Subjt:  SNQLRRLRLADC-DEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVE-EQSWTEH-------------MVSNEEALAIAETMPK

Query:  LCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTD
        L HLQ++ N LTN GL AILDGCP LE LD+ +CF ++L G LEK C E +K L  P D   D
Subjt:  LCHLQIIGNGLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTD

AT4G05475.1 RNI-like superfamily protein4.6e-5846.56Show/hide
Query:  QSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYI
        + + E  NW++LP E+ + ILL+L   +IL +A+ +C +WR+I KDP MWR I   NL D      D E MCRH VD S G L++INIE+F +D LL YI
Subjt:  QSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYI

Query:  TRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVS----------NEEALAIAETMPKLC
           S  L+ L ++  + ++++G+   + +LPLLE L I   S  +D LK +G  CP LK+LKL    S   H +S          +++ALAIAE+MPKL 
Subjt:  TRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVS----------NEEALAIAETMPKLC

Query:  HLQIIGNGLTNIGLQAILDGCPDLES-LDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTD
        HLQ++GNGLTN GL AILDGCP LE  LD+ +CFN+NL G LEK C +++K L  PHD   D
Subjt:  HLQIIGNGLTNIGLQAILDGCPDLES-LDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTD

AT4G05490.1 RNI-like superfamily protein3.3e-6447.67Show/hide
Query:  IQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEY--FGTDELL
        ++ E +  NW ELP +++S ILL+L  +EIL +A+ VC SWR++ KDPL+WR IDM NL   Y +Y  +E  CRH VD S G L++ NI+   F T  LL
Subjt:  IQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEY--FGTDELL

Query:  QYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQIIGN
         Y+   S+ LRRLR+    +++  G+ EA+ +LPLLE LE+L  S + +  KT+G+ CP LK+LKLV    W+    S+ +ALAIA+TMP L HLQ+I N
Subjt:  QYITRSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQIIGN

Query:  GLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFS
        GLTNIGL AILDGCP LE LDL QCFN+NL G LE++C E++K    P+D V D       + N    D + E+  ++S
Subjt:  GLTNIGLQAILDGCPDLESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFS

AT4G05497.1 RNI-like superfamily protein6.8e-5448.93Show/hide
Query:  EVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDM---HNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYIT
        E RNW ELP E+ S ILL+LGAIEIL +AQ VC SWR++ +DP MWR ID+    NL +S ++++ +E +C  AVD S G L++INI+Y      L YI 
Subjt:  EVRNWLELPAEVMSMILLKLGAIEILTSAQNVC-SWRKIYKDPLMWRVIDM---HNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYIT

Query:  RSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILI-FSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQIIGNGLT
          S+ LRRL + DC  V   G+ EA  +LPLLE L+I    S     LK VG+ CP L++LKL       +    ++ ALAIAETMP L HLQ+  NGL+
Subjt:  RSSNQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILI-FSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQIIGNGLT

Query:  NIGLQAILDGCPDLESLDLHQCFNLNLAGQLEK
          GL AIL+GCP L++L LHQC N+N+ G + K
Subjt:  NIGLQAILDGCPDLESLDLHQCFNLNLAGQLEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCAACTCCACGATTCAGTCGGAAGCTGAAGTGAGGAACTGGCTTGAACTACCTGCAGAAGTAATGTCTATGATTCTACTGAAGCTTGGCGCCATTGAAATCCT
CACCAGCGCTCAAAACGTCTGCTCTTGGCGTAAGATCTATAAGGATCCTCTCATGTGGCGTGTCATCGATATGCACAATTTGGGTGATTCTTATGACATGTATCACGATT
TGGAGATCATGTGCAGGCACGCTGTTGACCGTAGTTGTGGTCAATTGATCGACATCAACATTGAGTACTTTGGCACTGATGAGTTGCTCCAATACATCACTCGGAGTTCA
AATCAACTTAGAAGACTCCGGCTTGCAGATTGCGATGAAGTCTCAGACGAGGGATTGACTGAAGCAGTTTCGAGACTTCCATTGTTGGAGCATCTTGAAATCCTTATCTT
TTCATTTGATGTGGACACTTTGAAAACTGTTGGACGGTGTTGCCCTCTTCTGAAGTCGCTGAAACTGGTCGAAGAACAGAGTTGGACAGAACATATGGTGAGTAATGAGG
AGGCTCTTGCTATAGCTGAAACTATGCCCAAGTTATGTCACCTTCAGATAATTGGCAATGGCCTAACTAACATAGGATTGCAGGCCATTCTTGATGGCTGTCCTGATTTA
GAATCTCTTGACTTGCACCAATGTTTCAATTTAAATTTGGCTGGACAATTGGAAAAAGAATGTGCTGAAAAGGTCAAAGTTTTGTATCTGCCTCACGATCGTGTCACTGA
TGGCAATGAATGTACTACTAAAACTACCAATTTTGGTGCTCGTGATTCTGAAGATGAAGATTCGACTGATTTCTCGGACATTGATGGTGATTCCTATGATTTCTTAGTAG
ACGGCAATTTCTTAGATTATGATGACTTCACAAGAATCGATTATTCTGACTATGAGGACTTCACAAGACTCGGTCTCTTTGACGATGATGACTTCCCAGAGCATTATTAA
mRNA sequenceShow/hide mRNA sequence
TAATGGACAAACCCTATCATACACGATCCTCATTTCCATTTCGAAACGTCCCTAATTTCTCCAATTTCCTCAGAAATTCAATACACTGTCCAGTCCAATCCATTCCCATC
TCATGGAGTCCAACTCCACGATTCAGTCGGAAGCTGAAGTGAGGAACTGGCTTGAACTACCTGCAGAAGTAATGTCTATGATTCTACTGAAGCTTGGCGCCATTGAAATC
CTCACCAGCGCTCAAAACGTCTGCTCTTGGCGTAAGATCTATAAGGATCCTCTCATGTGGCGTGTCATCGATATGCACAATTTGGGTGATTCTTATGACATGTATCACGA
TTTGGAGATCATGTGCAGGCACGCTGTTGACCGTAGTTGTGGTCAATTGATCGACATCAACATTGAGTACTTTGGCACTGATGAGTTGCTCCAATACATCACTCGGAGTT
CAAATCAACTTAGAAGACTCCGGCTTGCAGATTGCGATGAAGTCTCAGACGAGGGATTGACTGAAGCAGTTTCGAGACTTCCATTGTTGGAGCATCTTGAAATCCTTATC
TTTTCATTTGATGTGGACACTTTGAAAACTGTTGGACGGTGTTGCCCTCTTCTGAAGTCGCTGAAACTGGTCGAAGAACAGAGTTGGACAGAACATATGGTGAGTAATGA
GGAGGCTCTTGCTATAGCTGAAACTATGCCCAAGTTATGTCACCTTCAGATAATTGGCAATGGCCTAACTAACATAGGATTGCAGGCCATTCTTGATGGCTGTCCTGATT
TAGAATCTCTTGACTTGCACCAATGTTTCAATTTAAATTTGGCTGGACAATTGGAAAAAGAATGTGCTGAAAAGGTCAAAGTTTTGTATCTGCCTCACGATCGTGTCACT
GATGGCAATGAATGTACTACTAAAACTACCAATTTTGGTGCTCGTGATTCTGAAGATGAAGATTCGACTGATTTCTCGGACATTGATGGTGATTCCTATGATTTCTTAGT
AGACGGCAATTTCTTAGATTATGATGACTTCACAAGAATCGATTATTCTGACTATGAGGACTTCACAAGACTCGGTCTCTTTGACGATGATGACTTCCCAGAGCATTATT
AACATTTGACATGTTAGATTTGGAAGCATATGTGAGAAAGCCCAGTTTCTACTTCTGTTGAACTTTAAGGTAAGTATGAGAAGTTCTCTTTCCATTACCGTAACTCTAAC
TACTTTTTTGTATTCTGGGTTTGTCATTTTGATATAAGAGTAACTCTAGGTAGACGCTTGTTGAAATTTAACTGACCATGTGTTAGAATATGTTTGTACTTGAACTATGG
ACGTATTCCGTATCAAAGGATTGGGTTCAATGTTGGATTTTCTTGTTCCCTTTAATTCGATGATGTGTGTTGGTTCACACAGTTTTGGCCA
Protein sequenceShow/hide protein sequence
MESNSTIQSEAEVRNWLELPAEVMSMILLKLGAIEILTSAQNVCSWRKIYKDPLMWRVIDMHNLGDSYDMYHDLEIMCRHAVDRSCGQLIDINIEYFGTDELLQYITRSS
NQLRRLRLADCDEVSDEGLTEAVSRLPLLEHLEILIFSFDVDTLKTVGRCCPLLKSLKLVEEQSWTEHMVSNEEALAIAETMPKLCHLQIIGNGLTNIGLQAILDGCPDL
ESLDLHQCFNLNLAGQLEKECAEKVKVLYLPHDRVTDGNECTTKTTNFGARDSEDEDSTDFSDIDGDSYDFLVDGNFLDYDDFTRIDYSDYEDFTRLGLFDDDDFPEHY