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CaUC01G025100 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC01G025100
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionFAD-binding Berberine family protein
Genome locationCiama_Chr01:36969456..36970025
RNA-Seq ExpressionCaUC01G025100
SyntenyCaUC01G025100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7834669.1 hypothetical protein G2W53_009528 [Senna tora]2.8e-1439.47Show/hide
Query:  MVDGESVLPEHIPVATATNVTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDT
        ++ GE VLPEH+ V +A +V  DA    ++        L P+ VI   +C + L+ G +V+D+D + PE+  VE DE  + ++G+AL +V   SDF+LD 
Subjt:  MVDGESVLPEHIPVATATNVTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDT

Query:  EVVGANDGRLDVGF
        +  G +DG LDVGF
Subjt:  EVVGANDGRLDVGF

KAF7834678.1 Ribonuclease J isoform B [Senna tora]2.2e-1440.35Show/hide
Query:  MVDGESVLPEHIPVATATNVTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDT
        ++ GE V PEH+ V +A +V ADA  G +         L  + VI   +C + L+ G +V+D+D + PE+  VE DE  + ++G+AL +V   SDF+LD 
Subjt:  MVDGESVLPEHIPVATATNVTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDT

Query:  EVVGANDGRLDVGF
        +  GA+DG LDVGF
Subjt:  EVVGANDGRLDVGF

KAF7835115.1 putative 6-phosphogluconolactonase 1 isoform X2 [Senna tora]5.2e-1642.11Show/hide
Query:  MVDGESVLPEHIPVATATNVTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDT
        ++ GE VLPEH+ V +A +V ADA    ++ R      L P+ VI   +C + L+ G +V+D+D + PE+  VE DE  + ++G+AL +V   SDF+LD 
Subjt:  MVDGESVLPEHIPVATATNVTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDT

Query:  EVVGANDGRLDVGF
        +  GA+DG LDVGF
Subjt:  EVVGANDGRLDVGF

KAF7835118.1 hypothetical protein G2W53_009977 [Senna tora]3.4e-1541.23Show/hide
Query:  MVDGESVLPEHIPVATATNVTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDT
        ++ GE V PEH+ V +A +V ADA  G +  R      L  + VI   +C + L+ G +V+D+D + PE+  VE DE  + ++G+AL +V   SDF+LD 
Subjt:  MVDGESVLPEHIPVATATNVTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDT

Query:  EVVGANDGRLDVGF
        +  GA+DG LDVGF
Subjt:  EVVGANDGRLDVGF

XP_022549630.1 uncharacterized protein LOC111201667, partial [Brassica napus]4.2e-1837.14Show/hide
Query:  LPEHIPVATATNVTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDTEVVGAND
        LP+H+ V  A  VT+D +   NS R +K+   LP+ VI+  E GS  +P RL+ ++D +  E+ HV+ ++  +G++ E +V+V   SD E + + + A D
Subjt:  LPEHIPVATATNVTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDTEVVGAND

Query:  GRLDVGFSEWSDDYEWLGRRGGVETGVSDMSPKNRSVRSI
        G  DV   E  DD  W G  G VE+ V+D+S ++  VR I
Subjt:  GRLDVGFSEWSDDYEWLGRRGGVETGVSDMSPKNRSVRSI

TrEMBL top hitse value%identityAlignment
A0A151UDM3 Uncharacterized protein (Fragment)3.8e-1248.81Show/hide
Query:  SRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDTEVVGANDGRLDVGF
        SR   NFTLLP S+I+ T+CG+ LN G LV+ + S+ PE+ HVE +E  +G++ +ALVI+  T D EL+  V GA    LD+GF
Subjt:  SRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDTEVVGANDGRLDVGF

A0A444BYK6 Uncharacterized protein (Fragment)1.0e-0938.05Show/hide
Query:  VTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDE-VDMGNIGEALVIVTPTSDFELDTEVVGANDGRLDVGFSEWS
        VTAD D GA++ R T    LL + V+H +E  + LNPGR V+ +D + PE   V+ DE +   ++  ALV+V P SD + +  +   +DG LDV      
Subjt:  VTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDE-VDMGNIGEALVIVTPTSDFELDTEVVGANDGRLDVGFSEWS

Query:  DDYEWLGRRGGVE
         D + L R G V+
Subjt:  DDYEWLGRRGGVE

A0A5A7NVW8 MARVEL domain-containing protein 2 (Fragment)4.7e-0741.35Show/hide
Query:  GSSLNPGRLVVDVDSNRPEIGHVEKDEVDM-GNIGEALVIVTPTSDFELDTEVVGANDGRLDVGFSEWSDDYEWLGRRGG--VETGVSDMSPKNRSVRSI
        G+  +PG     VD +RPE+GHVE  E  + G++G AL+++   +D E+D E  GA+DG  DVG     DD    G RGG  VE  V+D   K    R I
Subjt:  GSSLNPGRLVVDVDSNRPEIGHVEKDEVDM-GNIGEALVIVTPTSDFELDTEVVGANDGRLDVGFSEWSDDYEWLGRRGG--VETGVSDMSPKNRSVRSI

Query:  LWRV
         W V
Subjt:  LWRV

A0A7C9EI49 Uncharacterized protein8.9e-1440.35Show/hide
Query:  TLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDTEVVGANDGRLDVGFSEWSDDYEWLGRRGGVETGVSDM
        T L + V   T+CGS LNPG L++ V  NR E+ HVE+++  + ++G+ LV+V PT D   D++  G  D  LDVG  +  DD E  G  GG E  V ++
Subjt:  TLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDTEVVGANDGRLDVGFSEWSDDYEWLGRRGGVETGVSDM

Query:  SPKNRSVRSILWRV
          ++  VR +LW V
Subjt:  SPKNRSVRSILWRV

A0A7J0DWP6 FAD-binding Berberine family protein3.3e-0837.14Show/hide
Query:  VIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVD-MGNIGEALVIVTPTSDFELDTEVVGANDGRLDVGFSEWSDDYEWLGRRGGVETGVSDMSPKNR
        V+ F +    LNP  L +DVD  RP++ HV+ DE D +G++G+ ++IV    + EL  E++GA  G LDV + +  DD   L     VE  VSD+  ++ 
Subjt:  VIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVD-MGNIGEALVIVTPTSDFELDTEVVGANDGRLDVGFSEWSDDYEWLGRRGGVETGVSDMSPKNR

Query:  SVRSI
         V S+
Subjt:  SVRSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGACGGAGAGTCCGTACTTCCGGAGCATATTCCCGTAGCCACCGCCACTAATGTGACCGCCGATGCCGACGGTGGGGCAAACTCCAGCCGGGTAACCAAGAACTT
TACTCTTCTCCCAAATTCTGTAATACACTTCACCGAGTGTGGCTCCAGCTTGAACCCAGGCAGATTGGTCGTCGACGTCGACAGTAACCGCCCGGAGATTGGACATGTCG
AGAAGGATGAAGTGGACATGGGAAACATAGGAGAGGCCCTCGTAATCGTGACCCCCACTTCGGATTTTGAGTTGGATACCGAGGTTGTTGGAGCAAATGACGGCCGATTG
GACGTGGGATTCAGCGAGTGGAGTGACGATTATGAGTGGCTTGGGCGTAGAGGAGGTGTTGAAACGGGCGTTTCGGATATGAGCCCTAAGAACCGAAGTGTAAGAAGCAT
TTTGTGGAGAGTCTATCAGAGGGGCTGGCGTTGGATTCAAAGCAGTGGAGAAATGTGGTGTAGACGGAATGATCTGCGGCGGGGGAGGGAGCAGAGAGTGGGAGAAGGAG
AAGGAAGGAAAAAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGACGGAGAGTCCGTACTTCCGGAGCATATTCCCGTAGCCACCGCCACTAATGTGACCGCCGATGCCGACGGTGGGGCAAACTCCAGCCGGGTAACCAAGAACTT
TACTCTTCTCCCAAATTCTGTAATACACTTCACCGAGTGTGGCTCCAGCTTGAACCCAGGCAGATTGGTCGTCGACGTCGACAGTAACCGCCCGGAGATTGGACATGTCG
AGAAGGATGAAGTGGACATGGGAAACATAGGAGAGGCCCTCGTAATCGTGACCCCCACTTCGGATTTTGAGTTGGATACCGAGGTTGTTGGAGCAAATGACGGCCGATTG
GACGTGGGATTCAGCGAGTGGAGTGACGATTATGAGTGGCTTGGGCGTAGAGGAGGTGTTGAAACGGGCGTTTCGGATATGAGCCCTAAGAACCGAAGTGTAAGAAGCAT
TTTGTGGAGAGTCTATCAGAGGGGCTGGCGTTGGATTCAAAGCAGTGGAGAAATGTGGTGTAGACGGAATGATCTGCGGCGGGGGAGGGAGCAGAGAGTGGGAGAAGGAG
AAGGAAGGAAAAAGGAATAA
Protein sequenceShow/hide protein sequence
MVDGESVLPEHIPVATATNVTADADGGANSSRVTKNFTLLPNSVIHFTECGSSLNPGRLVVDVDSNRPEIGHVEKDEVDMGNIGEALVIVTPTSDFELDTEVVGANDGRL
DVGFSEWSDDYEWLGRRGGVETGVSDMSPKNRSVRSILWRVYQRGWRWIQSSGEMWCRRNDLRRGREQRVGEGEGRKKE