CuGenDBv2

Gene ID	CaUC02G026030
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Eukaryotic translation initiation factor 6
Genome location	Ciama_Chr02:338636..345145
RNA-Seq Expression	CaUC02G026030
Synteny	CaUC02G026030
Gene Ontology terms	GO:0000054 - ribosomal subunit export from nucleus (biological process) GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006413 - translational initiation (biological process) GO:0042256 - mature ribosome assembly (biological process) GO:1902626 - assembly of large subunit precursor of preribosome (biological process) GO:0005730 - nucleolus (cellular component) GO:0005829 - cytosol (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002769 - Translation initiation factor IF6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022147757.1 eukaryotic translation initiation factor 6-2 [Momordica charantia]

3.2e-123

94.29

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQE
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSY
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

XP_022931983.1 eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]

1.4e-123

94.29

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQE
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL A
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDWTAFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDSY
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

XP_022973842.1 eukaryotic translation initiation factor 6-2 [Cucurbita maxima]

4.9e-124

94.69

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Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQE
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL A
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSY
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

XP_038880643.1 eukaryotic translation initiation factor 6-2-like [Benincasa hispida]

9.8e-125

95.92

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FETELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQE
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDW AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

XP_038900322.1 eukaryotic translation initiation factor 6-2 [Benincasa hispida]

5.2e-126

96.73

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQE
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D392 Eukaryotic translation initiation factor 6

1.5e-123

94.29

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQE
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSY
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

A0A6J1F0A8 Eukaryotic translation initiation factor 6

6.8e-124

94.29

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQE
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL A
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDWTAFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDSY
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

A0A6J1G8F7 Eukaryotic translation initiation factor 6

2.0e-123

93.88

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQE
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL  
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDSY
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

A0A6J1I8L9 Eukaryotic translation initiation factor 6

2.4e-124

94.69

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQE
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL A
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSY
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

A0A6J1L2F0 Eukaryotic translation initiation factor 6

2.0e-123

93.88

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRIQE
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL  
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDSY
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

SwissProt top hits

e value

%identity

Alignment

O55135 Eukaryotic translation initiation factor 6

9.0e-97

72.54

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        R  FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQ       H+RNSLPD V ++R++E
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        NDW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

P56537 Eukaryotic translation initiation factor 6

9.0e-97

72.95

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        R  FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQ       H+RNSLPD V ++R++E
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        NDW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Q3KRD8 Eukaryotic translation initiation factor 6

2.6e-96

72.13

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        R  FEN+CE+G F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQ       H+RNSLPD V ++R++E
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        NDW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Q9M060 Eukaryotic translation initiation factor 6-2

7.8e-117

84.9

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RL FEN+CE+GVFSKLTNAYCLVAIGGSENFYS FE+EL  VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRI E
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGN IACND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTSVEDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T 
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+Y
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

Q9TU47 Eukaryotic translation initiation factor 6

3.1e-97

72.95

Show/hide

Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        R  FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV  SI G RIIGR+C GN++GLLVP+ TTDQ       H+RN LPD V ++R++E
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        NDW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Arabidopsis top hits

e value

%identity

Alignment

AT2G39820.1 Translation initiation factor IF6

1.2e-88

65.59

Show/hide

Query:  RLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRI
        RL ++ N+CEIGVFSKLTNAYCLV A   S NF++ +E++L GVIP+V TSI G+  IG LC GNKNGLL+ HT TDQ       HLR+SLPD+VVVQRI
Subjt:  RLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRI

Query:  QERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGL
        +E + ALGN IACND+VAL H  L+++TEE+I+DVLGVEV+RQT+A N LVGSYCS +N GG+VH +T+VE++ EL+ L+QVPLVAGTVNRGS+VI+AGL
Subjt:  QERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGL

Query:  TANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        T NDWTAFCGSDTTA ELSV+ ++FKL ++QP  +  EMRKSLID+Y
Subjt:  TANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

AT3G55620.1 Translation initiation factor IF6

5.5e-118

84.9

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Query:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE
        RL FEN+CE+GVFSKLTNAYCLVAIGGSENFYS FE+EL  VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQ       HLRNSLPDQVVVQRI E
Subjt:  RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQE

Query:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA
        RLSALGN IACND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTSVEDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T 
Subjt:  RLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTA

Query:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
        NDWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+Y
Subjt:  NDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY

Sequences

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CDS sequence

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ATGAGGTTTGGTCTCTACAATTTTAAACGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCCTGGTTGCAATTGGTGGCTC
TGAGAATTTCTACAGTACGTTCGAAACTGAATTAGGTGGTGTCATTCCGGTCGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAA
ATGGGCTTCTTGTACCACACACCACTACTGACCAAGGCAAGTTTCTTTTCTATCTTCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGA
TTGTCTGCTCTGGGGAATACCATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTGGAGGT
CTTTAGGCAGACAGTAGCGGGCAACGTCCTTGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCTGTTGAAGATCTGGATGAGCTAT
CAACCCTTCTTCAGGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGATTGGACCGCGTTTTGTGGTTCGGACACC
ACGGCCACCGAGTTATCCGTCATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGATAGTTACAAGAATTC
TGACACATCCAAATCCAACACTAATAGGTTGAAGAAGATTATGGATGAACTAAGGGCATCAGAGCATTTGTATTACATGATCTTTGGCAGAATTTATAAAGATCTTGTTG
ACCCCGAGGAGCTTCAAGAAACTCTTGTTGGACACATTGTTAAAATCAAATTCATCAAGATCAAATTCTCCATCGTCGTAGCTTCTTGCCATTGCTTCATCGTCCATAAG
GTTGTTCTCAATTCTATCTGGAAAAACTTCTGCAATATCTTCATCACTGCTACCTCCGCCTTCTTCTTCTTCATCATA

mRNA sequence

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Protein sequence

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MRFGLYNFKRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQGKFLFYLHLRNSLPDQVVVQRIQER
LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDT
TATELSVIESVFKLREAQPSSIVEEMRKSLIDSYKNSDTSKSNTNRLKKIMDELRASEHLYYMIFGRIYKDLVDPEELQETLVGHIVKIKFIKIKFSIVVASCHCFIVHK
VVLNSIWKNFCNIFITATSAFFFFII

CaUC02G026030 (gene) of Watermelon (USVL246-FR2) v1 genome