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CaUC02G028250 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G028250
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationCiama_Chr02:2578609..2580345
RNA-Seq ExpressionCaUC02G028250
SyntenyCaUC02G028250
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023554650.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]4.8e-3387.1Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME
        MASFAARAI RSS GKAATLLSVGARAAPARSPF +ASKRP S+C+VR+PVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME

XP_023554651.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo]8.2e-3391.01Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
        MASFAARAI RSS GKAATLLSVGARAAPARSPF +ASKRP S+C+VR+PVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV

XP_038887455.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]1.9e-3489.25Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME
        MASFA RAIFRSSSGKAATLLSVGARAAPARSPF +ASKRPFS+CSVRIPVEMSFCVESMLPFHSATSSALM SMLSVSRH+YGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME

XP_038887456.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa hispida]3.3e-3493.26Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
        MASFA RAIFRSSSGKAATLLSVGARAAPARSPF +ASKRPFS+CSVRIPVEMSFCVESMLPFHSATSSALM SMLSVSRH+YGWLSEV
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV

XP_038887457.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]7.4e-3493.18Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFA RAIFRSSSGKAATLLSVGARAAPARSPF +ASKRPFS+CSVRIPVEMSFCVESMLPFHSATSSALM SMLSVSRH+YGWLSE
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

TrEMBL top hitse value%identityAlignment
A0A1S3CB40 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.5e-3286.02Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME
        MASFAARAIFRSSSGK ATLLS GARAAPARSPF +ASKRPFS  S RIP+EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME

A0A5A7TDD1 Protein NUCLEAR FUSION DEFECTIVE 62.6e-3290.91Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSGKAATLLS GARAAPARSPF +ASKRPFS  S RIP+EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 62.6e-3290.91Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSGKAATLLS GARAAPARSPF +ASKRPFS  S RIP+EMSFCVESMLPFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A6J1HZK6 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X23.4e-3288.76Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
        MASFAARAI RSS G+AATLLSVG+RAAPARS F +ASKRPFS+C+VR+PVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV

A0A6J1I278 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X12.0e-3284.95Show/hide
Query:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME
        MASFAARAI RSS G+AATLLSVG+RAAPARS F +ASKRPFS+C+VR+PVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEV  ++
Subjt:  MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPME

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial4.1e-1148.84Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+SFCVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein7.2e-1145.98Show/hide
Query:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWL
        AAR++FRS++ +A++     S G +  P  AR+ F +  + P +    R PVE+S CVE+MLP+H+AT+SAL+ SMLSVSR   GW+
Subjt:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWL

AT1G28395.2 unknown protein7.2e-1145.98Show/hide
Query:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWL
        AAR++FRS++ +A++     S G +  P  AR+ F +  + P +    R PVE+S CVE+MLP+H+AT+SAL+ SMLSVSR   GW+
Subjt:  AARAIFRSSSGKAATL---LSVGARAAP--ARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWL

AT2G20585.1 nuclear fusion defective 62.9e-1248.84Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+SFCVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

AT2G20585.2 nuclear fusion defective 62.9e-1248.84Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+SFCVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

AT2G20585.3 nuclear fusion defective 62.9e-1248.84Show/hide
Query:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++A   S G  A+ A+S    F   ++R      +R PVE+SFCVES+LP+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKAATLLSVGARAAPARSP---FGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTGCGACTCTTCTGAGCGTCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTGGCGTTGC
TTCTAAACGACCTTTCTCTAAGTGCTCTGTAAGGATTCCAGTTGAAATGAGCTTCTGCGTGGAGTCCATGCTTCCATTCCATTCTGCAACTTCTTCGGCATTGATGACTT
CGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGTACAGCCGATGGAGGATGTAATATGTGTGATATACACAATTGACCCTATATTTTTGGCCCTTAGA
ATGAAAGATGAAAAGGAGGAGGATGAAATAGTGAAGGGAAGAAAGAAGCCCGAGGCCGAGCGCTTCCCTCTTGAGTTAGGGGTGGCGTGGTATTCCACAGGGAGAGGTTT
TTCAAATTGTGGCGCACTCTCAGGGCGGAAAGTTTTGTGTGCAGAGTTCTACATTGTGACAGTGGCCGCTGCTAAATTTCGCGAGCTGATCCGCTGGAATTTGGTTTTCC
ATGTGTTGGCTTTCAGTCTAGTTTGCATGTCTTAG
mRNA sequenceShow/hide mRNA sequence
CGAATTTATAATTTAATTTTAAAAAAGAAAAAGAAAAAGTCCCCCGTTTTCTCTAGTAGCGGCGGCAGGGTTTAGCATATCAATGCCCTAAATCTAAGACGGAACTCCGT
TCGTTTATCGTGGCTGCATTCTCAGATTTGCCGATGGCTTCCTTTGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTGCGACTCTTCTGAGCGTCGGAGCCAG
AGCAGCTCCGGCTCGTTCACCATTTGGCGTTGCTTCTAAACGACCTTTCTCTAAGTGCTCTGTAAGGATTCCAGTTGAAATGAGCTTCTGCGTGGAGTCCATGCTTCCAT
TCCATTCTGCAACTTCTTCGGCATTGATGACTTCGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGTACAGCCGATGGAGGATGTAATATGTGTGATA
TACACAATTGACCCTATATTTTTGGCCCTTAGAATGAAAGATGAAAAGGAGGAGGATGAAATAGTGAAGGGAAGAAAGAAGCCCGAGGCCGAGCGCTTCCCTCTTGAGTT
AGGGGTGGCGTGGTATTCCACAGGGAGAGGTTTTTCAAATTGTGGCGCACTCTCAGGGCGGAAAGTTTTGTGTGCAGAGTTCTACATTGTGACAGTGGCCGCTGCTAAAT
TTCGCGAGCTGATCCGCTGGAATTTGGTTTTCCATGTGTTGGCTTTCAGTCTAGTTTGCATGTCTTAG
Protein sequenceShow/hide protein sequence
MASFAARAIFRSSSGKAATLLSVGARAAPARSPFGVASKRPFSKCSVRIPVEMSFCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEVQPMEDVICVIYTIDPIFLALR
MKDEKEEDEIVKGRKKPEAERFPLELGVAWYSTGRGFSNCGALSGRKVLCAEFYIVTVAAAKFRELIRWNLVFHVLAFSLVCMS