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CaUC02G028340 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G028340
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr02:2670669..2671234
RNA-Seq ExpressionCaUC02G028340
SyntenyCaUC02G028340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038888333.1 glycine-rich protein-like isoform X1 [Benincasa hispida]3.2e-0588.57Show/hide
Query:  MSSRAFIFLGLLFAIVVLFSSEEVTVTARDAKFSE
        MSS+AFIFLGLLFAIVVLFSSEEVTV ARD KF E
Subjt:  MSSRAFIFLGLLFAIVVLFSSEEVTVTARDAKFSE
XP_038888334.1 glycine-rich protein-like isoform X2 [Benincasa hispida]1.6e-0490.91Show/hide
Query:  MSSRAFIFLGLLFAIVVLFSSEEVTVTARDAKF
        MSS+AFIFLGLLFAIVVLFSSEEVTV ARD KF
Subjt:  MSSRAFIFLGLLFAIVVLFSSEEVTVTARDAKF
TrEMBL top hitse value%identityAlignment
A0A0A0K1A3 Uncharacterized protein5.0e-0439.85Show/hide
Query:  MSSRAFIFLGLLFAIVVLFSSEEVTVTARDAKFSEFHFFTLLLAQ-------------------KYISFVKYEAMLETLPNASTVAPEVVADASVAVASG
        M+S+ FI LGLLF+IV+L S +  TVTARD KFSEF+F +  L                     K  + V  E  L++  NAS VA  VV  ASV VAS 
Subjt:  MSSRAFIFLGLLFAIVVLFSSEEVTVTARDAKFSEFHFFTLLLAQ-------------------KYISFVKYEAMLETLPNASTVAPEVVADASVAVASG

Query:  AAALLMRLL---MESPKRSLIIKLMLLLQAKGL
        AA L    +   +E   + +  K +LLLQ   L
Subjt:  AAALLMRLL---MESPKRSLIIKLMLLLQAKGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATATGAGTTCCAGAGCTTTCATCTTCCTTGGTCTTCTTTTCGCCATTGTCGTCCTCTTTTCCTCGGAGGAGGTAACGGTTACGGCAAGGGATGCGAAATTCAGTGAGTT
TCATTTCTTCACACTTTTATTGGCACAAAAATACATAAGTTTCGTCAAATATGAGGCCATGCTCGAAACCTTGCCGAATGCCTCCACGGTTGCGCCCGAGGTTGTTGCGG
ATGCGTCCGTGGCCGTTGCATCAGGTGCTGCAGCTCTGCTGATGAGGCTGTTGATGGAGAGCCCCAAGCGAAGCCTAATAATTAAACTCATGTTGTTGCTTCAAGCAAAA
GGGCTTTAA
mRNA sequenceShow/hide mRNA sequence
AATATGAGTTCCAGAGCTTTCATCTTCCTTGGTCTTCTTTTCGCCATTGTCGTCCTCTTTTCCTCGGAGGAGGTAACGGTTACGGCAAGGGATGCGAAATTCAGTGAGTT
TCATTTCTTCACACTTTTATTGGCACAAAAATACATAAGTTTCGTCAAATATGAGGCCATGCTCGAAACCTTGCCGAATGCCTCCACGGTTGCGCCCGAGGTTGTTGCGG
ATGCGTCCGTGGCCGTTGCATCAGGTGCTGCAGCTCTGCTGATGAGGCTGTTGATGGAGAGCCCCAAGCGAAGCCTAATAATTAAACTCATGTTGTTGCTTCAAGCAAAA
GGGCTTTAA
Protein sequenceShow/hide protein sequence
NMSSRAFIFLGLLFAIVVLFSSEEVTVTARDAKFSEFHFFTLLLAQKYISFVKYEAMLETLPNASTVAPEVVADASVAVASGAAALLMRLLMESPKRSLIIKLMLLLQAK
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