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CaUC02G028350 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G028350
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionglycine-rich protein DC7.1-like
Genome locationCiama_Chr02:2680798..2683231
RNA-Seq ExpressionCaUC02G028350
SyntenyCaUC02G028350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645721.1 hypothetical protein Csa_020383 [Cucumis sativus]2.3e-0749.4Show/hide
Query:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCI
        M+SKAFI LGLLF  V+L    EVTA+TA +     EA  +TDE++DVK H  GG  A S+A   C + C  GCC C  G C+
Subjt:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCI

XP_004144531.1 glycine-rich protein [Cucumis sativus]3.6e-1358.06Show/hide
Query:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCI---SVVGECG
        MSSK+FI LGLLF  VVL SSE +T +TARD K +KEA MET EVD+V+RH +GG  + ++A   CL+ C  GCC C RGRCI   S  GE G
Subjt:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCI---SVVGECG

XP_038888333.1 glycine-rich protein-like isoform X1 [Benincasa hispida]1.1e-2046.11Show/hide
Query:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCISVVGECGCRVGGACSRK
        MSSKAFIFLGLLF +VVL SSEEVT + ARDVKF +EAMMET EVDDV+RHGFGGG A ++A   CL+ C HGCC C RGRCI                 
Subjt:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCISVVGECGCRVGGACSRK

Query:  TSKLAKKNLIGGEVEEKMREEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN
                                                       RC S AGEAVD +PQAKPNN
Subjt:  TSKLAKKNLIGGEVEEKMREEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN

XP_038888334.1 glycine-rich protein-like isoform X2 [Benincasa hispida]1.8e-2046.11Show/hide
Query:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCISVVGECGCRVGGACSRK
        MSSKAFIFLGLLF +VVL SSEEVT + ARDVKF  EAMMET EVDDV+RHGFGGG A ++A   CL+ C HGCC C RGRCI                 
Subjt:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCISVVGECGCRVGGACSRK

Query:  TSKLAKKNLIGGEVEEKMREEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN
                                                       RC S AGEAVD +PQAKPNN
Subjt:  TSKLAKKNLIGGEVEEKMREEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN

XP_038888674.1 glycine-rich protein-like [Benincasa hispida]7.1e-0939.26Show/hide
Query:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETD--EVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCISVVGECGCRVGGACS
        MSSKAFIFLG LFVVVVLLSSEEVTAI A D+K +++AMMET+    +DVKR    G        H     C HGCC                       
Subjt:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETD--EVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCISVVGECGCRVGGACS

Query:  RKTSKLAKKNLIGGEVEEKMREEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEP
                                                 HHH GGCSRC S AGEAVDAEP
Subjt:  RKTSKLAKKNLIGGEVEEKMREEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEP

TrEMBL top hitse value%identityAlignment
A0A0A0K5A1 Uncharacterized protein1.8e-1358.06Show/hide
Query:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCI---SVVGECG
        MSSK+FI LGLLF  VVL SSE +T +TARD K +KEA MET EVD+V+RH +GG  + ++A   CL+ C  GCC C RGRCI   S  GE G
Subjt:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCI---SVVGECG

A0A6J1C3E0 glycine-rich protein DC7.1-like2.5e-0453.25Show/hide
Query:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDE-VDDVKRHGFGGGQAISVANHVCLNRCAHGCCS
        MSSK  IFLGLLF VVVLLSSEEVTA TARD+K ++E M ET+  ++D KR   G        +H     C H  CS
Subjt:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDE-VDDVKRHGFGGGQAISVANHVCLNRCAHGCCS

A0A6J1C3T3 glycine-rich protein 3 short isoform-like1.6e-0636.9Show/hide
Query:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCISVVGECGCRVGGACSRK
        M+SKAFI LGLLF VVVLLSS+    +TARD+K   E +METD V+D K   +  G               HG                    GG   R 
Subjt:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCISVVGECGCRVGGACSRK

Query:  TSKLAKKNLIGGEVEEKMREEKWSEKGKFSEDT-LDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN
         S+       G           +  +G++        GCC +H G C RC S AGEAVD EPQAKP+N
Subjt:  TSKLAKKNLIGGEVEEKMREEKWSEKGKFSEDT-LDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN

A0A6J1ESD5 glycine-rich protein DC7.1-like1.3e-0552.5Show/hide
Query:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMET--DEVDDVKRHGFGGGQAISVANHVCLNR----CAHGC
        M+SKAFI LGLLF +V+LLSSEE +A TAR +K ++EA+MET  D ++D KR  FGGG      +H   +R    C HGC
Subjt:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMET--DEVDDVKRHGFGGGQAISVANHVCLNR----CAHGC

A0A6J1JMI7 glycine-rich protein DC7.1-like1.2e-0657.14Show/hide
Query:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMET--DEVDDVKRHGFGGGQAISVANHVCLNR-CAHGC
        M+SKAFI LGLLF VV+LLSSEE TA TAR +K ++EA+MET  D ++D KR  FGGG      +H   +R C HGC
Subjt:  MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMET--DEVDDVKRHGFGGGQAISVANHVCLNR-CAHGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGTCGTCGTCGTCCTCCTCTCCTCGGAGGAGGTAACCGCGATTACGGCAAGGGATGTGAAATTCATG
AAAGAAGCTATGATGGAAACTGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAGGGCAGGCTATATCCGTTGCCAATCATGTATGCCTCAACCGCTGC
GCCCACGGTTGTTGCAGCTGCGTCCGCGGCCGTTGCATCAGCGTTGTTGGAGAGTGCGGTTGCCGCGTCGGAGGAGCGTGCAGCCGCAAGACCTCCAAGCTTGCA
AAGAAAAACTTGATTGGGGGAGAGGTGGAAGAAAAGATGAGAGAGGAAAAGTGGAGTGAGAAAGGAAAATTTTCGGAGGACACTTTAGATTCTGGTTGTTGTCAC
CACCACGACGGTGGTTGCAGCCGGTGCCGCAGTTCTGCTGGTGAGGCTGTTGATGCAGAGCCCCAAGCCAAGCCTAACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAGGCTTTCATCTTCCTCGGTCTTCTTTTCGTCGTCGTCGTCCTCCTCTCCTCGGAGGAGGTAACCGCGATTACGGCAAGGGATGTGAAATTCATG
AAAGAAGCTATGATGGAAACTGATGAAGTTGACGATGTCAAGCGCCACGGTTTTGGAGGAGGGCAGGCTATATCCGTTGCCAATCATGTATGCCTCAACCGCTGC
GCCCACGGTTGTTGCAGCTGCGTCCGCGGCCGTTGCATCAGCGTTGTTGGAGAGTGCGGTTGCCGCGTCGGAGGAGCGTGCAGCCGCAAGACCTCCAAGCTTGCA
AAGAAAAACTTGATTGGGGGAGAGGTGGAAGAAAAGATGAGAGAGGAAAAGTGGAGTGAGAAAGGAAAATTTTCGGAGGACACTTTAGATTCTGGTTGTTGTCAC
CACCACGACGGTGGTTGCAGCCGGTGCCGCAGTTCTGCTGGTGAGGCTGTTGATGCAGAGCCCCAAGCCAAGCCTAACAACTGA
Protein sequenceShow/hide protein sequence
MSSKAFIFLGLLFVVVVLLSSEEVTAITARDVKFMKEAMMETDEVDDVKRHGFGGGQAISVANHVCLNRCAHGCCSCVRGRCISVVGECGCRVGGACSRKTSKLA
KKNLIGGEVEEKMREEKWSEKGKFSEDTLDSGCCHHHDGGCSRCRSSAGEAVDAEPQAKPNN