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CaUC02G028700 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G028700
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionsodium/potassium/calcium exchanger 1-like
Genome locationCiama_Chr02:2926222..2926722
RNA-Seq ExpressionCaUC02G028700
SyntenyCaUC02G028700
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572225.1 hypothetical protein SDJN03_28953, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4270.06Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRN-----EALGAAMADGSRKIERKVEIGEERENG
        MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI +SG E  G +     E+ GAAM D +  IERKVE GEERENG
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRN-----EALGAAMADGSRKIERKVEIGEERENG

Query:  LIAKE--EEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEI----DEELNKKCEEFIRKMKEGIKFESQQVIVL
         IA+E  EE E L+TE++ + E EEQEE+    EEEEEEE EE+    +EEL+KK EEFIRKMK GIK ESQQV++L
Subjt:  LIAKE--EEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEI----DEELNKKCEEFIRKMKEGIKFESQQVIVL

KAG6589100.1 hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4168.82Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRN----EALGAAMADGSRKIERKVEIGEERENGL
        MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI  SGD HSG +    EAL A+MADGS KIE KVE  EER NGL
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRN----EALGAAMADGSRKIERKVEIGEERENGL

Query:  IAKEEEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL
        I K+EE E  I EDD+ D+DEE+    +              EELNKKCEEFIRKMK GIK ESQQ++VL
Subjt:  IAKEEEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL

XP_008462077.2 PREDICTED: gem-associated protein 2-like [Cucumis melo]1.0e-4476.4Show/hide
Query:  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGA-AMADGSRKIERK--VEIGEERENGLIAKEEEIEELITE
        MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+ +E S RNEALGA  MADG+RKIE K  VE+ EER NGL+  EE+ E LIT 
Subjt:  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGA-AMADGSRKIERK--VEIGEERENGLIAKEEEIEELITE

Query:  DDNEDEDEE----QEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL
         DNEDE+E     +EE     EEEEEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Subjt:  DDNEDEDEE----QEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL

XP_011658666.2 glutamic acid-rich protein [Cucumis sativus]2.2e-5076.7Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGAA-MADGSRKIERKVEIGEERENGLIAK
        MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+ DE S  NEALGAA MADG+RKIE KVEI EER NGL+  
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGAA-MADGSRKIERKVEIGEERENGLIAK

Query:  EEEIEELITEDDNEDE-----DEEQEERFNFYEEE----EEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL
        E++IE LIT+++ E+E     +EE+EE  +  EEE    EEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Subjt:  EEEIEELITEDDNEDE-----DEEQEERFNFYEEE----EEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL

XP_038888415.1 histone H3.v1-like [Benincasa hispida]1.9e-6289.76Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGAAMADGSRKIERKVEIGEERENGLIAKE
        MKLVISASLLSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLIGNS DE SGRNEALGAAMADG+RKIE KVEI EERENGLIAKE
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGAAMADGSRKIERKVEIGEERENGLIAKE

Query:  EEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL
        EE EELIT      +DE++EERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQV VL
Subjt:  EEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL

TrEMBL top hitse value%identityAlignment
A0A0A0K349 Uncharacterized protein4.7e-5179.04Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGAA-MADGSRKIERKVEIGEERENGLIAK
        MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+ DE S  NEALGAA MADG+RKIE KVEI EER NGL+  
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGAA-MADGSRKIERKVEIGEERENGLIAK

Query:  EEEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL
        E++IE LIT      ++E +EERF  Y   EEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Subjt:  EEEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL

A0A1S3CG16 gem-associated protein 2-like5.0e-4576.4Show/hide
Query:  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGA-AMADGSRKIERK--VEIGEERENGLIAKEEEIEELITE
        MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN+ +E S RNEALGA  MADG+RKIE K  VE+ EER NGL+  EE+ E LIT 
Subjt:  MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGA-AMADGSRKIERK--VEIGEERENGLIAKEEEIEELITE

Query:  DDNEDEDEE----QEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL
         DNEDE+E     +EE     EEEEEEEEEEIDEELNKKCEEFIRKMK GIKFESQQ+ +L
Subjt:  DDNEDEDEE----QEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL

A0A6J1C4P4 ATP-dependent RNA helicase MAK53.0e-3765.45Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGAAMADGSRKIERKVEIGEERENGLIAKE
        MK++ISASLLSAMV YSSLLPFLHSLNLYIS+TIHKNY+FLLCNGLLVFIVRNSGLIG SG+E              G  K+E KVE GEERENGL+A++
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGAAMADGSRKIERKVEIGEERENGLIAKE

Query:  EEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIV
        EE E+LITED+  +E+          EEEEEE+    +EELN+KCEEFIRKMK  IKFE QQV+V
Subjt:  EEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIV

A0A6J1EJY9 uncharacterized protein LOC1114352602.6e-4169.41Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRN----EALGAAMADGSRKIERKVEIGEERENGL
        MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI  SGD HSG +    EAL A+MADGS KIE KVE  EER NGL
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRN----EALGAAMADGSRKIERKVEIGEERENGL

Query:  IAKEEEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL
        I K+EE E  I EDD+ D+D           ++EEE      EELNKKCEEFIRKMK GIK ESQQ++VL
Subjt:  IAKEEEIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL

A0A6J1I0H9 sodium/potassium/calcium exchanger 1-like2.9e-4068.18Show/hide
Query:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRN-----EALGAAMADGSRKIERKVEIGEERENG
        MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI +SG E  G +     EALGAAM D +  IERKVE GEERENG
Subjt:  MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRN-----EALGAAMADGSRKIERKVEIGEERENG

Query:  LIAKEE-EIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEI----DEELNKKCEEFIRKMKEGIKFESQQVIVL
         IA+EE E E L+TE++ + E EE+       +EEE+ E EE+    +EEL+KK EEFIRKMK GIK ESQQV++L
Subjt:  LIAKEE-EIEELITEDDNEDEDEEQEERFNFYEEEEEEEEEEI----DEELNKKCEEFIRKMKEGIKFESQQVIVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTAGTGATCTCAGCTTCCTTACTCTCTGCAATGGTATTTTACTCTTCTCTCCTCCCTTTTCTCCACTCTTTAAACCTTTATATCTCTTCAACAATCCACAAGAA
CTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGGAATTCCGGTCTTATCGGCAACTCCGGCGACGAACATAGCGGCAGAAATGAAGCTCTAGGAGCTG
CAATGGCAGATGGGAGCAGAAAAATTGAGAGGAAAGTTGAAATTGGAGAAGAAAGGGAAAATGGGTTGATTGCAAAAGAAGAAGAAATTGAAGAATTGATTACAGAAGAT
GATAATGAAGATGAAGATGAAGAACAAGAAGAAAGATTCAATTTTTATGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAATTGATGAAGAATTGAATAAGAAATGTGAAGA
ATTTATTAGAAAAATGAAGGAAGGAATTAAATTTGAATCACAGCAAGTGATTGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTAGTGATCTCAGCTTCCTTACTCTCTGCAATGGTATTTTACTCTTCTCTCCTCCCTTTTCTCCACTCTTTAAACCTTTATATCTCTTCAACAATCCACAAGAA
CTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGGAATTCCGGTCTTATCGGCAACTCCGGCGACGAACATAGCGGCAGAAATGAAGCTCTAGGAGCTG
CAATGGCAGATGGGAGCAGAAAAATTGAGAGGAAAGTTGAAATTGGAGAAGAAAGGGAAAATGGGTTGATTGCAAAAGAAGAAGAAATTGAAGAATTGATTACAGAAGAT
GATAATGAAGATGAAGATGAAGAACAAGAAGAAAGATTCAATTTTTATGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAATTGATGAAGAATTGAATAAGAAATGTGAAGA
ATTTATTAGAAAAATGAAGGAAGGAATTAAATTTGAATCACAGCAAGTGATTGTTTTGTAA
Protein sequenceShow/hide protein sequence
MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNSGDEHSGRNEALGAAMADGSRKIERKVEIGEERENGLIAKEEEIEELITED
DNEDEDEEQEERFNFYEEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVIVL