CuGenDBv2

Gene ID	CaUC02G030130
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Protein translocase complex, SecE/Sec61-gamma subunit
Genome location	Ciama_Chr02:4222010..4227963
RNA-Seq Expression	CaUC02G030130
Synteny	CaUC02G030130
Gene Ontology terms	GO:0006605 - protein targeting (biological process) GO:0071806 - protein transmembrane transport (biological process) GO:0090351 - seedling development (biological process) GO:0009528 - plastid inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit IPR038379 - SecE superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144859.1 uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus]

4.8e-59

78.48

Show/hide

Query:  LVLTAVPKKPNQGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNHASGRDN-QQLSFNDEWPPEPFFLSLIKETVWGLRSL
        +V+T+    P+ G IC+P+SK+P+HVL YNT R  KS++FQRLHT+ISKRSG+H+YAGRMGFNHA+   N QQ SFNDE PPEPFFLSLIKET WGLRSL
Subjt:  LVLTAVPKKPNQGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNHASGRDN-QQLSFNDEWPPEPFFLSLIKETVWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRT
        LIFL EQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSY+LTL+LRRT
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRT

XP_008447932.1 PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo]

3.8e-56

77.36

Show/hide

Query:  LVLTAVPKKPNQGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSL
        +V+T+     + G IC+P+ K  +HVL YN  R  KS++FQRLHT+ISKRSG H+YAGRMGFNH ASG++ QQ SFNDEWP EPFFLSLIKET WGLRSL
Subjt:  LVLTAVPKKPNQGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS
        LIFL EQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSY+LTLLLRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS

XP_022136339.1 uncharacterized protein LOC111008049 [Momordica charantia]

1.4e-50

76.19

Show/hide

Query:  GTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK
        G IC P  K P H+LH NT RF KS  FQ+L   IS+RSG H+YAGRM FNH ASGR+N QL+FN+E+PPEPF LSLI+E +WGLRSLLIFL EQPSQLK
Subjt:  GTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK

Query:  YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS
        YIEWPSFQSTLKTATL LVLVALLIVALSSVDSALSYILTL+LRR++
Subjt:  YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS

XP_023529805.1 uncharacterized protein LOC111792519 [Cucurbita pepo subsp. pepo]

1.3e-51

80.27

Show/hide

Query:  GTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK
        G   +P S  PFHV  YNTARF K+ IFQ L T+IS+RSG H+YA RMGFNH ASGRDNQQL FNDE PPEPFFL +IKETVWGLRSL IFLAEQPSQLK
Subjt:  GTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK

Query:  YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS
        YIEWPSFQSTLKTAT ALVLVALLIVALSSVDS LSYILT +LRRTS
Subjt:  YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS

XP_038888680.1 uncharacterized protein LOC120078486 [Benincasa hispida]

8.1e-67

91.84

Show/hide

Query:  GTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK
        GT+C+P+SK+PFHVLHYNTARF KSTI QRLHT+ISKR+G+HVYAGRMGFNH ASG+DNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK
Subjt:  GTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK

Query:  YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS
        YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTL LRRTS
Subjt:  YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K1C8 Uncharacterized protein

2.3e-59

78.48

Show/hide

Query:  LVLTAVPKKPNQGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNHASGRDN-QQLSFNDEWPPEPFFLSLIKETVWGLRSL
        +V+T+    P+ G IC+P+SK+P+HVL YNT R  KS++FQRLHT+ISKRSG+H+YAGRMGFNHA+   N QQ SFNDE PPEPFFLSLIKET WGLRSL
Subjt:  LVLTAVPKKPNQGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNHASGRDN-QQLSFNDEWPPEPFFLSLIKETVWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRT
        LIFL EQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSY+LTL+LRRT
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRT

A0A1S3BJG9 uncharacterized protein LOC103490269

1.8e-56

77.36

Show/hide

Query:  LVLTAVPKKPNQGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSL
        +V+T+     + G IC+P+ K  +HVL YN  R  KS++FQRLHT+ISKRSG H+YAGRMGFNH ASG++ QQ SFNDEWP EPFFLSLIKET WGLRSL
Subjt:  LVLTAVPKKPNQGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS
        LIFL EQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSY+LTLLLRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS

A0A5A7SIK1 Protein translocase complex, SecE/Sec61-gamma subunit

1.8e-56

77.36

Show/hide

Query:  LVLTAVPKKPNQGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSL
        +V+T+     + G IC+P+ K  +HVL YN  R  KS++FQRLHT+ISKRSG H+YAGRMGFNH ASG++ QQ SFNDEWP EPFFLSLIKET WGLRSL
Subjt:  LVLTAVPKKPNQGTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS
        LIFL EQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSY+LTLLLRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS

A0A6J1C3M0 uncharacterized protein LOC111008049

6.7e-51

76.19

Show/hide

Query:  GTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK
        G IC P  K P H+LH NT RF KS  FQ+L   IS+RSG H+YAGRM FNH ASGR+N QL+FN+E+PPEPF LSLI+E +WGLRSLLIFL EQPSQLK
Subjt:  GTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK

Query:  YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS
        YIEWPSFQSTLKTATL LVLVALLIVALSSVDSALSYILTL+LRR++
Subjt:  YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS

A0A6J1EK97 uncharacterized protein LOC111435124

1.1e-50

78.91

Show/hide

Query:  GTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK
        G   +P S  PFHV  YNTAR  K+ IFQ L T+IS+R G H+YA RMGFNH ASGRDNQQL FNDE PPEPFFL +IKETVWGLRSL IFLAEQPSQLK
Subjt:  GTICVPRSKDPFHVLHYNTARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNH-ASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK

Query:  YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS
        YIEWPSFQSTLKTAT ALVLVALLIVALSSVDS LSYILT +LRRTS
Subjt:  YIEWPSFQSTLKTATLALVLVALLIVALSSVDSALSYILTLLLRRTS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G38490.1 unknown protein

1.3e-22

54.7

Show/hide

Query:  KRSGNHVYAGRMGFNH--ASGRDNQQLSFNDEW-------PPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVAL
        K SG+    GR+   H   SG      S  + W         EP +LSL+++ VW  RSLL F+AEQPSQLKYIEWP+F STLKTATL+L LVA+ IVAL
Subjt:  KRSGNHVYAGRMGFNH--ASGRDNQQLSFNDEW-------PPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVAL

Query:  SSVDSALSYILTLLLRR
        SSVD+AL YIL L+LR+
Subjt:  SSVDSALSYILTLLLRR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGCTTCCGCCCGCTGGATCGCAGTTCCTTTGGAGAATTTGGGTTCCGAGTTACTGTGGGAAGTCTGATTGTGGAAAGCCCATTAAGCCCATGGACTGCCTTTTTGCCGA
TGCTGCCAACCCACCCCCGGTTGTAGACATCTTCGCCGGCAACACAGACCACGAGCGACGGCCGGCGAGTCCTCCGACAGCGGCGCTTGCTTCTTCTTGGTGCCGACAAC
CTCAGACCCCGCGAGCCCTTGTGTTGACGGCAGTACCCAAGAAACCCAACCAAGGTACGATTTGTGTTCCTCGGTCCAAGGATCCATTCCATGTTCTACATTACAACACA
GCAAGATTCTACAAGTCCACAATCTTTCAGAGACTGCACACAAAGATCTCCAAAAGGAGTGGAAATCATGTCTATGCTGGGAGAATGGGTTTTAACCATGCATCGGGACG
AGATAATCAGCAACTGAGCTTTAATGATGAATGGCCTCCAGAACCTTTCTTCTTGAGTCTAATTAAAGAAACCGTATGGGGATTGAGATCGTTGTTAATATTTCTAGCCG
AGCAGCCCAGTCAACTGAAATACATTGAATGGCCTAGCTTCCAAAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTCTTGATTGTAGCACTCTCATCG
GTGGACTCGGCGCTCAGCTACATTTTGACTTTACTTCTCAGAAGAACCTCATAATAAATGCTGCTACTCTTCTCCTATTGGTACATCAGTTTCTCAGAAATTCAAGTTCT
CTTTGCCATTTTAGAAATGATAACTGAGAGTGAGAGTTCTTGGCATGTTAATGTAGTTGGAAATGTTCTGAAAAAGGTAATGCATAAGCATCTCTTTGAAATCGTGCAAC
TAGGAAAGTAGAGAGTGTTGTCCTCCATGTTTCTCACAGACATACACTTACAACCCTCCCCATACGTTCAATTAGGACAGTATGGTCGCAAGTGTTACTTACTGCATATA
AGCGGTTCGGTTCGAATCGTTCAATTATATATAGAATAATTGAAATTGCTCCGAACCAACAACCATTGGTTCAGTCGGTTCAGTTTGTCGTTTATTACTCAATCGCTGGG
GCAATGCGGGTGTTGGGGTGAAATGGGTCAGCTGACACCAAAGCCAACTTGACCAACACATCCACACGATAACTAATTCAAAATTTCGATGACTG

Protein sequence

Show/hide protein sequence

MLPPAGSQFLWRIWVPSYCGKSDCGKPIKPMDCLFADAANPPPVVDIFAGNTDHERRPASPPTAALASSWCRQPQTPRALVLTAVPKKPNQGTICVPRSKDPFHVLHYNT
ARFYKSTIFQRLHTKISKRSGNHVYAGRMGFNHASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQSTLKTATLALVLVALLIVALSS
VDSALSYILTLLLRRTS

CaUC02G030130 (gene) of Watermelon (USVL246-FR2) v1 genome