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CaUC02G030590 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G030590
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCiama_Chr02:4648125..4648370
RNA-Seq ExpressionCaUC02G030590
SyntenyCaUC02G030590
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645660.1 hypothetical protein Csa_020551 [Cucumis sativus]3.4e-2568.75Show/hide
Query:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQ
        MG+R LL+R    S++PKGYCAVYVGENQKK+FVIP+T+LNQ C Q+LL Q   +F Y+HPMGGLT HC+DDIFTDLIS+
Subjt:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQ

KAE8645661.1 hypothetical protein Csa_020412 [Cucumis sativus]1.0e-2979.49Show/hide
Query:  HLLRR-SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL
        H ++R S VPKGYCAVYVGENQKK+FVIP+TYLNQPC QDLL Q T EF+YYHPMGGLTFHC DDIF DLIS LN+QL
Subjt:  HLLRR-SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL

KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]9.0e-2670.45Show/hide
Query:  MGLRHLLRRSS---------VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQ
        M L  LLRR S         VPKGYCAVYVGE QKK+FVIPVTYLNQPC QDLL QA  EF YYHPMGGLT  C++DIFT+LISQLN+
Subjt:  MGLRHLLRRSS---------VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQ

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]9.0e-2669.51Show/hide
Query:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN
        M L HLL+R    SS+PKGYCAVYVGE+QKK+F+IP++YLNQPC Q+LL Q   EF Y+HPMGGLT HCKD IFT+LIS+LN
Subjt:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]1.9e-2875.61Show/hide
Query:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN
        MGLR LL+R    S+VPKGYCAVYVGE+QKK+FVIP++YLNQPC Q+LL QA  EF YYHPMGGLT HC+DDIFTDLIS+LN
Subjt:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN

TrEMBL top hitse value%identityAlignment
A0A0A0K4K1 Uncharacterized protein3.0e-2771.95Show/hide
Query:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN
        M L+HLL+R    S+VPKGYCAVYVGE+QKK+FVIP+TYLN+PC Q LL Q   EF YYHPMGGLT HC+DDIFTDLIS +N
Subjt:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN

A0A0A0K5U4 Uncharacterized protein4.4e-2669.51Show/hide
Query:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN
        M L HLL+R    SS+PKGYCAVYVGE+QKK+F+IP++YLNQPC Q+LL Q   EF Y+HPMGGLT HCKD IFT+LIS+LN
Subjt:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN

A0A0A0K5V1 Uncharacterized protein2.4e-3276.67Show/hide
Query:  MGLRHLLRRSS---------VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL
        MGLR LLRRSS         VPKGYCAVYVGENQKK+FVIP+TYLNQPC QDLL Q T EF+YYHPMGGLTFHC DDIF DLIS LN+QL
Subjt:  MGLRHLLRRSS---------VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL

A0A5D3CL76 Auxin-induced protein 15A-like2.2e-2570.59Show/hide
Query:  MGLRHLLRRSS------VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQ
        M +  LLRR+S      VPKGYCAVYVGE QKK+FVIPVTYLNQPC Q LL QA  EF YYHPMGGLT  C++DIFT+LISQLN+
Subjt:  MGLRHLLRRSS------VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQ

A0A6J1C4W2 auxin-responsive protein SAUR24-like9.4e-2975.61Show/hide
Query:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN
        MGLR LL+R    S+VPKGYCAVYVGE+QKK+FVIP++YLNQPC Q+LL QA  EF YYHPMGGLT HC+DDIFTDLIS+LN
Subjt:  MGLRHLLRR----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG77.2e-1863.24Show/hide
Query:  PKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQQ
        PKGY AVYVGEN K+ FVIPV++LNQP  QDLL QA  EF Y HPMGGLT  C +D+F  + S L+ Q
Subjt:  PKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQQ

P33081 Auxin-induced protein 15A8.5e-1958.44Show/hide
Query:  GLRHLLRRSSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN
        G+R   + +  PKGY AVYVGE + K+FVIPV+YLNQP  QDLL QA  EF Y HPMGGLT  C +D+F  + S LN
Subjt:  GLRHLLRRSSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN

P33082 Auxin-induced protein X153.6e-1754.55Show/hide
Query:  GLRHLLRRSSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN
        G+R        PKGY AVYVGE  K+ FVIPV+Y+NQP  QDLL QA  EF Y HPMGGLT  C +++F  +   LN
Subjt:  GLRHLLRRSSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN

Q41220 Auxin-responsive protein SAUR152.7e-1750.62Show/hide
Query:  MGLRHLLRR--SSVPKGYCAVYVGEN--QKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQL
        +G + ++RR  SS P+G+ AVYVGEN  +KK++V+PV+YLNQP  Q LL ++  EF Y HPMGGLT  C + +F  + SQ+
Subjt:  MGLRHLLRR--SSVPKGYCAVYVGEN--QKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQL

Q9FK62 Auxin-responsive protein SAUR243.6e-1748.78Show/hide
Query:  MGLRHLLRR-----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQL
        +G + +L R     S+ PKG+ AVYVGE+QKK++++PV+YLNQP  Q LL ++  EF + HPMGGLT  C +D F ++ S+L
Subjt:  MGLRHLLRR-----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family8.7e-1954.55Show/hide
Query:  LRHLLRRSSVPKGYCAVYVGE-NQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN
        L H     ++PKG+ AVYVGE  QK++FV+PVTYL+ PC Q LL +A  EF + HPMGGLT  C + IF DL S+L+
Subjt:  LRHLLRRSSVPKGYCAVYVGE-NQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN

AT4G38840.1 SAUR-like auxin-responsive protein family1.3e-1961.19Show/hide
Query:  VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN
        VPKGY AVYVGE   K+FV+PV+YL+QP  QDLL +A  EF + HPMGGLT  C ++IF DL S+ N
Subjt:  VPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLN

AT4G38850.1 SAUR-like auxin-responsive protein family1.9e-1850.62Show/hide
Query:  MGLRHLLRR--SSVPKGYCAVYVGEN--QKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQL
        +G + ++RR  SS P+G+ AVYVGEN  +KK++V+PV+YLNQP  Q LL ++  EF Y HPMGGLT  C + +F  + SQ+
Subjt:  MGLRHLLRR--SSVPKGYCAVYVGEN--QKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQL

AT5G18050.1 SAUR-like auxin-responsive protein family4.3e-1847.56Show/hide
Query:  MGLRHLLRR-----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQL
        +G + +L R     S+ PKG+ AVYVGE+QKK++++P++YLNQP  Q LL ++  EF + HPMGGLT  C +D F ++ S+L
Subjt:  MGLRHLLRR-----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQL

AT5G18080.1 SAUR-like auxin-responsive protein family2.5e-1848.78Show/hide
Query:  MGLRHLLRR-----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQL
        +G + +L R     S+ PKG+ AVYVGE+QKK++++PV+YLNQP  Q LL ++  EF + HPMGGLT  C +D F ++ S+L
Subjt:  MGLRHLLRR-----SSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTTCGCCATCTTCTCCGGCGGTCTTCGGTTCCGAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAGCAGTTCGTGATTCCAGTAACTTAC
TTGAATCAACCATGTCTACAAGATTTGCTTGGTCAAGCTACAGGAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTC
ACTGATCTGATCTCTCAGTTAAATCAACAACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTTCGCCATCTTCTCCGGCGGTCTTCGGTTCCGAAGGGCTATTGTGCAGTCTATGTTGGAGAGAATCAAAAGAAGCAGTTCGTGATTCCAGTAACTTAC
TTGAATCAACCATGTCTACAAGATTTGCTTGGTCAAGCTACAGGAGAATTTGATTACTATCATCCAATGGGTGGTCTCACATTTCACTGCAAAGATGATATCTTC
ACTGATCTGATCTCTCAGTTAAATCAACAACTATGA
Protein sequenceShow/hide protein sequence
MGLRHLLRRSSVPKGYCAVYVGENQKKQFVIPVTYLNQPCLQDLLGQATGEFDYYHPMGGLTFHCKDDIFTDLISQLNQQL