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CaUC02G031260 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G031260
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr02:5616909..5617223
RNA-Seq ExpressionCaUC02G031260
SyntenyCaUC02G031260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036627.1 hypothetical protein E6C27_scaffold191G001550 [Cucumis melo var. makuwa]3.6e-1954.24Show/hide
Query:  MLIVVGVLVISTNLIEITKAIRSINYIGAPQGGVEVVCSPEDPRVYNLNYANQESSEFNDVDGCKPQKDHQHNINGDGLE---------------HMAPQ
        M+++VGVL+IST LIEITKA   I   GAPQ GVE+VCSPEDPRV+ L+YAN ESSEFN VD CK       N+N  G                 ++APQ
Subjt:  MLIVVGVLVISTNLIEITKAIRSINYIGAPQGGVEVVCSPEDPRVYNLNYANQESSEFNDVDGCKPQKDHQHNINGDGLE---------------HMAPQ

Query:  SPKEIKGDKNIVTHLPYM
        S +E KG KN+VT LPYM
Subjt:  SPKEIKGDKNIVTHLPYM

KAE8646139.1 hypothetical protein Csa_016560, partial [Cucumis sativus]5.0e-1360.23Show/hide
Query:  MLIVVGVLVISTNLIEITKA--IRSINYIGAPQGGVEVVCSPEDPRVYNLNYANQESSEFNDVDGCKPQKDHQHNINGDGLEHMAPQS
        ML+ VGVL+IST LIEITKA   R+ +Y G    GVE+VCSPEDPRV+ L+YAN ESSE+N VD CK  K  + N NG    +MAPQS
Subjt:  MLIVVGVLVISTNLIEITKA--IRSINYIGAPQGGVEVVCSPEDPRVYNLNYANQESSEFNDVDGCKPQKDHQHNINGDGLEHMAPQS

TrEMBL top hitse value%identityAlignment
A0A0A0K4C8 Uncharacterized protein1.7e-1460.44Show/hide
Query:  MLIVVGVLVISTNLIEITKA-IRSINYIGAPQGGVEVVCSPEDPRVYNLNYANQESSEFNDVDGCKPQKDHQHNINGDGLEHMAP-QSPKE
        M + VG+L+IST LIEITKA  RS+NY GAPQ GVE+VCSPEDPRV+ L+YAN ESSE+N VD C   K    N+N DG     P QSP +
Subjt:  MLIVVGVLVISTNLIEITKA-IRSINYIGAPQGGVEVVCSPEDPRVYNLNYANQESSEFNDVDGCKPQKDHQHNINGDGLEHMAP-QSPKE

A0A0A0K7P8 Uncharacterized protein2.4e-1360.23Show/hide
Query:  MLIVVGVLVISTNLIEITKA--IRSINYIGAPQGGVEVVCSPEDPRVYNLNYANQESSEFNDVDGCKPQKDHQHNINGDGLEHMAPQS
        ML+ VGVL+IST LIEITKA   R+ +Y G    GVE+VCSPEDPRV+ L+YAN ESSE+N VD CK  K  + N NG    +MAPQS
Subjt:  MLIVVGVLVISTNLIEITKA--IRSINYIGAPQGGVEVVCSPEDPRVYNLNYANQESSEFNDVDGCKPQKDHQHNINGDGLEHMAPQS

A0A5D3BWB1 Uncharacterized protein1.7e-1954.24Show/hide
Query:  MLIVVGVLVISTNLIEITKAIRSINYIGAPQGGVEVVCSPEDPRVYNLNYANQESSEFNDVDGCKPQKDHQHNINGDGLE---------------HMAPQ
        M+++VGVL+IST LIEITKA   I   GAPQ GVE+VCSPEDPRV+ L+YAN ESSEFN VD CK       N+N  G                 ++APQ
Subjt:  MLIVVGVLVISTNLIEITKAIRSINYIGAPQGGVEVVCSPEDPRVYNLNYANQESSEFNDVDGCKPQKDHQHNINGDGLE---------------HMAPQ

Query:  SPKEIKGDKNIVTHLPYM
        S +E KG KN+VT LPYM
Subjt:  SPKEIKGDKNIVTHLPYM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATTGTTGTTGGTGTTCTTGTTATTAGCACAAACCTAATTGAAATTACAAAAGCAATTAGATCCATCAATTATATTGGTGCTCCTCAAGGAGGTGTGGAGGTTGT
ATGTAGCCCAGAAGATCCAAGAGTTTACAACCTGAATTATGCTAACCAAGAATCAAGTGAATTCAATGATGTTGATGGTTGCAAACCTCAAAAAGATCATCAACATAACA
TCAATGGTGATGGATTGGAACATATGGCTCCTCAAAGCCCAAAAGAAATCAAAGGAGACAAAAATATTGTTACTCATCTACCATACATGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGATTGTTGTTGGTGTTCTTGTTATTAGCACAAACCTAATTGAAATTACAAAAGCAATTAGATCCATCAATTATATTGGTGCTCCTCAAGGAGGTGTGGAGGTTGT
ATGTAGCCCAGAAGATCCAAGAGTTTACAACCTGAATTATGCTAACCAAGAATCAAGTGAATTCAATGATGTTGATGGTTGCAAACCTCAAAAAGATCATCAACATAACA
TCAATGGTGATGGATTGGAACATATGGCTCCTCAAAGCCCAAAAGAAATCAAAGGAGACAAAAATATTGTTACTCATCTACCATACATGAATTAA
Protein sequenceShow/hide protein sequence
MLIVVGVLVISTNLIEITKAIRSINYIGAPQGGVEVVCSPEDPRVYNLNYANQESSEFNDVDGCKPQKDHQHNINGDGLEHMAPQSPKEIKGDKNIVTHLPYMN