; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G032780 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G032780
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionpumilio homolog 12-like
Genome locationCiama_Chr02:8016047..8019844
RNA-Seq ExpressionCaUC02G032780
SyntenyCaUC02G032780
Gene Ontology termsGO:0006417 - regulation of translation (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645845.1 hypothetical protein Csa_017253 [Cucumis sativus]1.4e-9371.43Show/hide
Query:  HRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPL
        HR+VV LIS L+YPCQQW I L M PH+LTLAKDF  GH+V++SCF N  P  NELI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVLISPL
Subjt:  HRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPL

Query:  IQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVA
        IQD  +LS HPYGNYVIQ+MIQLDG NIG RII EL +KFV LSMDK+GSNVVEKCLSCCEG  + II+EILE N  ++L+QICTNQYGN+VVQT MS+A
Subjt:  IQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVA

Query:  KGNAHRLLERAIKSHWFVLQFHPYGKNVIASAKLIIKK
        KG   +LLE+AIKSHW VLQ H YG+NVI+S +   KK
Subjt:  KGNAHRLLERAIKSHWFVLQFHPYGKNVIASAKLIIKK

KAG9440050.1 hypothetical protein H6P81_020215 [Aristolochia fimbriata]6.7e-4038.43Show/hide
Query:  LILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSPPPN
        L++DP GN F+  L++  +      ++L +  +  +F+  CL   G R V  L+  LR P Q+  I  A+ P  L L KD   GH V++ CF + S   N
Subjt:  LILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSPPPN

Query:  ELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSNVVE
        + + ++IAQ+C E+A N++GCC+LQ C+      +   +E LIS +  +A  LS   +GNYV+Q+++      I   ++ +L+ KF  LSM KF SNVVE
Subjt:  ELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSNVVE

Query:  KCLSCC-EGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAKL
        KCL    E     II E+LE+     LLQ+  ++YGN+V+Q A SV+KG+ H  +E AI+ +   L  HPYGKNV+A   L
Subjt:  KCLSCC-EGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAKL

XP_008455521.1 PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]6.2e-8666.54Show/hide
Query:  MPLMED-DQAMLSNNNANANTNYSIINSNNNNNNNNNNYLMTILKKLTTNDVHSLILDPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSQHFLPPCLH
        M LM+D D  M+SN++A            N+++ N+N +L ++L++LTT  +H +I+ PLGN FLLHLLQ    H TFINHLLLSL T S  HFLP  LH
Subjt:  MPLMED-DQAMLSNNNANANTNYSIINSNNNNNNNNNNYLMTILKKLTTNDVHSLILDPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSQHFLPPCLH

Query:  HLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLI
        +LG+RVVV LIS L+YPCQQW I L MSPH+LTLAKDFQGGH+V++SCF + SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREVLI
Subjt:  HLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLI

Query:  SPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSNVVEKCL
        +PLI+DA +LS HPYGNYVIQ+MIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  SPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSNVVEKCL

XP_015866393.2 pumilio homolog 12-like [Ziziphus jujuba]6.1e-4136.77Show/hide
Query:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNL
        +++H L++   GN  +  L++  +   ++ +L+S+I++ Q F   C+   G RVV KL+  L+ P QQ+    A+S   + L K   G H V++ CF  L
Subjt:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNL

Query:  SPPPNELILLRIAQNCYELARNQAGCCILQECIEYS-----NDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLS
        SP  N+ +L  +A NC E+A +++GCCILQ C+ Y+       +  + ++ L++ +I +A  LS HPYGNYV+Q +I          I+ +L+ K+V LS
Subjt:  SPPPNELILLRIAQNCYELARNQAGCCILQECIEYS-----NDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLS

Query:  MDKFGSNVVEKCL--SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAK
        M+K GSNVVEKCL  S  E     I+ EI+   N    L +  + YGNYV Q+A+ V+ G  H  L R I  H   L  HP+GK V+  A+
Subjt:  MDKFGSNVVEKCL--SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAK

XP_022148742.1 pumilio homolog 12-like [Momordica charantia]9.9e-6851.96Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP
        +H L+L PLGN+ +  L +  H+ FI  LLLSLI     FL  CLH LG + VVKL+  L  P  Q    + +S H + LAK    GH VL +CF NLS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN
          NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR VL++PLIQ+A +LS H Y N+VIQ++I+LD ANIG R+I  L+NKFV L + K GS+
Subjt:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASA
        VVEKCL C E     II+EI+E  N+   +Q+ TNQYGNYV Q A+SVAKG A+ LL RAIKS   +L+FHPYG++V+A+A
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASA

TrEMBL top hitse value%identityAlignment
A0A0A0K7S4 PUM-HD domain-containing protein5.1e-7072.83Show/hide
Query:  ELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSNVVE
        +LI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVLISPLIQD  +LS HPYGNYVIQ+MIQLDG NIG RII EL +KFV LSMDK+GSNVVE
Subjt:  ELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSNVVE

Query:  KCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAKLIIKK
        KCLSCCEG  + II+EILE N  ++L+QICTNQYGN+VVQT MS+AKG   +LLE+AIKSHW VLQ H YG+NVI+S +   KK
Subjt:  KCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAKLIIKK

A0A1D1XXP3 Pumilio 122.5e-4038.21Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP
        V  L++DP GN  +  LL+  ++    +++ +L +     +       G R + K+I  LR P Q   I  ++ P IL L KD  G H V + C   LSP
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN
          ++ +      +C ELAR++ GCC+LQ+C+ + +    QLRE LIS +  +A  LS  P+GNYVIQY+++L  A+    ++N+LK+ F  LSM K+ SN
Subjt:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIAS
        VVEKCL C     D  I  ILE     QLLQI  + YGNYV+Q+A+ + KG  H    + I+ H   L+ +PYG+ V++S
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIAS

A0A1S3C139 putative pumilio homolog 8, chloroplastic3.0e-8666.54Show/hide
Query:  MPLMED-DQAMLSNNNANANTNYSIINSNNNNNNNNNNYLMTILKKLTTNDVHSLILDPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSQHFLPPCLH
        M LM+D D  M+SN++A            N+++ N+N +L ++L++LTT  +H +I+ PLGN FLLHLLQ    H TFINHLLLSL T S  HFLP  LH
Subjt:  MPLMED-DQAMLSNNNANANTNYSIINSNNNNNNNNNNYLMTILKKLTTNDVHSLILDPLGNNFLLHLLQ--SSHQTFINHLLLSLIT-SSQHFLPPCLH

Query:  HLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLI
        +LG+RVVV LIS L+YPCQQW I L MSPH+LTLAKDFQGGH+V++SCF + SP PNELILLR+AQNC ELAR QAGCCILQECIEYSN+  RQLREVLI
Subjt:  HLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLI

Query:  SPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSNVVEKCL
        +PLI+DA +LS HPYGNYVIQ+MIQLDG NIGWR+I EL +KFV LSMDK+GSNVVEKC+
Subjt:  SPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSNVVEKCL

A0A6J1D5W5 pumilio homolog 12-like4.8e-6851.96Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP
        +H L+L PLGN+ +  L +  H+ FI  LLLSLI     FL  CLH LG + VVKL+  L  P  Q    + +S H + LAK    GH VL +CF NLS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN
          NE+ILL IA N  ELA+++ GCCIL  CI Y+      LR VL++PLIQ+A +LS H Y N+VIQ++I+LD ANIG R+I  L+NKFV L + K GS+
Subjt:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASA
        VVEKCL C E     II+EI+E  N+   +Q+ TNQYGNYV Q A+SVAKG A+ LL RAIKS   +L+FHPYG++V+A+A
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASA

A0A6P3YS61 pumilio homolog 12-like2.9e-4136.77Show/hide
Query:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNL
        +++H L++   GN  +  L++  +   ++ +L+S+I++ Q F   C+   G RVV KL+  L+ P QQ+    A+S   + L K   G H V++ CF  L
Subjt:  NDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNL

Query:  SPPPNELILLRIAQNCYELARNQAGCCILQECIEYS-----NDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLS
        SP  N+ +L  +A NC E+A +++GCCILQ C+ Y+       +  + ++ L++ +I +A  LS HPYGNYV+Q +I          I+ +L+ K+V LS
Subjt:  SPPPNELILLRIAQNCYELARNQAGCCILQECIEYS-----NDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLS

Query:  MDKFGSNVVEKCL--SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAK
        M+K GSNVVEKCL  S  E     I+ EI+   N    L +  + YGNYV Q+A+ V+ G  H  L R I  H   L  HP+GK V+  A+
Subjt:  MDKFGSNVVEKCL--SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAK

SwissProt top hitse value%identityAlignment
P25339 Pumilio homology domain family member 44.0e-2728.53Show/hide
Query:  NNNANANTNYSIINSNNNNNNNNNNYLMTILKKLTTN-------------DVHSLILDPLGNNFL-----------------------LHLLQSSHQTFI
        NNN N N N    N+NNNN+N  N+      +K+  +              +HSL  D  G  FL                       + L+  S   ++
Subjt:  NNNANANTNYSIINSNNNNNNNNNNYLMTILKKLTTN-------------DVHSLILDPLGNNFL-----------------------LHLLQSSHQTFI

Query:  NHLLLSLIT----------SSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCYE
           LL  +T          SS HF+   L+  G R + KLI C++   +   +  ++ P+ + L+KD  G H V++ C   L P   + I   I+ +C +
Subjt:  NHLLLSLIT----------SSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCYE

Query:  LARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGW----RIINELKNKFVVLSMDKFGSNVVEKCLSCCEGG
        +A ++ GCC+LQ C+++      +  + L   L+   D L++ P+GNYV+QY+I  +     +    +I++ LK + + LS+ KFGSNV+EK L      
Subjt:  LARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGW----RIINELKNKFVVLSMDKFGSNVVEKCLSCCEGG

Query:  FDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVA-KGNAH---RLLERAIKSHWFVLQFHPYGKNVIASAKL
         + +I EIL N  E  +  +  + YGNYV+QTA+ ++ K N +   RL E         ++  P+GK +I    L
Subjt:  FDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVA-KGNAH---RLLERAIKSHWFVLQFHPYGKNVIASAKL

Q1PFN9 Pumilio homolog 91.3e-3032.99Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSS-QHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLS
        V  L +DP GN  +  L   S +     L++S++TS+ +  +  CL+  G RVV K+I  ++   Q   +   + P  L L KD  G H V++SC   L 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSS-QHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLS

Query:  PPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGS
        P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE L++ + +++ +LS  P+GNYV+QY+I    + +  +++ + +  +  L+  KF S
Subjt:  PPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGS

Query:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAKLIIKK
        +V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV KG     L   +   +  L   PY K +   +K I+KK
Subjt:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAKLIIKK

Q9C9R6 Putative pumilio homolog 7, chloroplastic8.8e-3533.33Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP
        V  L++DP GN  +  LL    +     ++L         +   L+  G RVV +L+  +R   Q   + LA+ P  L L KD  G H V++ C   LS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN
          N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE LI+ + +++  L+  P+GNY +Q++I+L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        +VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  KG  H  L   I+ H  +L+ +PY K + +
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

Q9LM20 Putative pumilio homolog 8, chloroplastic1.7e-3330.82Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP
        V  L++DP GN  +  LL   ++     ++L + +     +   L+  G RVV +L+  ++   Q   +  A+ P  L L +D  G H V++ C   LS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN
          NE I     + C ++A ++ GCC+LQ+CI YS+      RE L++ + +++  L+  PYGNY +Q++++L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        +VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V KG+ H  L   I+ H  +L+ +PY K + +
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

Q9LVC3 Pumilio homolog 124.1e-3232.5Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP
        +  L++DP GN  +  LL+  ++     ++ S+       +       G R V K++   +   +   I  A+   I+ L K+  G H V++ C   L P
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN
           + +      +C ELA ++ GCC+LQ+C+ YS  + +Q    L+S +  +A  LS  P+GNYV+QY+ +L      + I+ +L+  +  LSM K  SN
Subjt:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIAS
        VVEKCL   +      I  I E  N  +L Q+  + YGNYV+Q A+  +KGN H LL  AIK +   L+ +PYGK V+++
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIAS

Arabidopsis top hitse value%identityAlignment
AT1G22240.1 pumilio 81.2e-3430.82Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP
        V  L++DP GN  +  LL   ++     ++L + +     +   L+  G RVV +L+  ++   Q   +  A+ P  L L +D  G H V++ C   LS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN
          NE I     + C ++A ++ GCC+LQ+CI YS+      RE L++ + +++  L+  PYGNY +Q++++L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        +VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V KG+ H  L   I+ H  +L+ +PY K + +
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

AT1G35730.1 pumilio 99.4e-3232.99Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSS-QHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLS
        V  L +DP GN  +  L   S +     L++S++TS+ +  +  CL+  G RVV K+I  ++   Q   +   + P  L L KD  G H V++SC   L 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSS-QHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLS

Query:  PPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGS
        P  NE +L    + C E+A ++ GCC+LQ CI   ++ +   RE L++ + +++ +LS  P+GNYV+QY+I    + +  +++ + +  +  L+  KF S
Subjt:  PPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGS

Query:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAKLIIKK
        +V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV KG     L   +   +  L   PY K +   +K I+KK
Subjt:  NVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIASAKLIIKK

AT1G78160.1 pumilio 76.3e-3633.33Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP
        V  L++DP GN  +  LL    +     ++L         +   L+  G RVV +L+  +R   Q   + LA+ P  L L KD  G H V++ C   LS 
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN
          N+ I     + C E+A ++ GCC+LQ+CI YS   +RQ RE LI+ + +++  L+  P+GNY +Q++I+L   +    ++ +LK  +V LSM KF S+
Subjt:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        +VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  KG  H  L   I+ H  +L+ +PY K + +
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

AT4G08840.1 pumilio 114.6e-3130.9Show/hide
Query:  ILKKLTTNDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVL
        I+ K   N+V  L  DP GN  +  L++  ++     +L+ L +     +   +++ G RVV KLI  +    Q   +  A+ P  L+L ++  G H +L
Subjt:  ILKKLTTNDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVL

Query:  RSCFYNLSPPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVV
         +C    SP  N+ IL    + C E+A  + GCC+LQ C+ YS   + +  E L+  + +++  L+  P+GNY++QY+I+      G  ++ EL+  +V 
Subjt:  RSCFYNLSPPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVV

Query:  LSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA
        L+  KFGS+VVEKCL         I+ E++   N   LLQ   + Y NYV+Q A+S  KG     L   ++  +  L+  PY K + +
Subjt:  LSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIA

AT5G56510.1 pumilio 122.9e-3332.5Show/hide
Query:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP
        +  L++DP GN  +  LL+  ++     ++ S+       +       G R V K++   +   +   I  A+   I+ L K+  G H V++ C   L P
Subjt:  VHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVKLISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSP

Query:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN
           + +      +C ELA ++ GCC+LQ+C+ YS  + +Q    L+S +  +A  LS  P+GNYV+QY+ +L      + I+ +L+  +  LSM K  SN
Subjt:  PPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSN

Query:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIAS
        VVEKCL   +      I  I E  N  +L Q+  + YGNYV+Q A+  +KGN H LL  AIK +   L+ +PYGK V+++
Subjt:  VVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHWFVLQFHPYGKNVIAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTAATGGAAGATGATCAAGCAATGCTTTCCAATAATAATGCTAATGCTAATACCAATTATAGCATTATTAATAGTAATAATAATAATAATAATAATAAT
AATAATTACTTAATGACCATTCTTAAAAAACTTACAACAAATGATGTTCATTCACTAATTCTTGACCCACTTGGAAACAACTTCCTTCTACATCTTCTTCAATCT
TCCCATCAAACTTTCATTAATCATCTTCTTCTCTCCCTTATCACTTCATCACAACACTTCCTACCACCCTGCCTTCATCATCTCGGACATCGAGTCGTGGTGAAG
TTAATCTCTTGTTTGAGATACCCTTGTCAACAATGGACCATTACATTGGCAATGAGTCCCCACATCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTG
CTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCCTGCTTAGAATAGCACAAAATTGCTATGAGCTGGCAAGAAATCAAGCTGGTTGTTGT
ATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTTCTCATATCCCCGTTGATACAAGATGCAGATAATCTTTCAATACATCCT
TACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGTACTTTCTATGGAC
AAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTT
CAAATTTGTACAAATCAATATGGCAATTACGTTGTCCAGACAGCCATGTCCGTTGCTAAGGGAAATGCTCATAGGTTACTTGAAAGAGCCATTAAGAGCCATTGG
TTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATCGGCCAAACTCATCATTAAGAAATTGGATGAGAATTCAAACGTAATTTTTCGTTGTCCACCT
CTGTCCTGTCAAGCATCCATCGTTAGTCCCATCTTTCGACCTACTTTTGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCTGCTCGTG
AATCCACCACCATGTAGATGCTCTGCTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTACT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCCATTAATGGAAGATGATCAAGCAATGCTTTCCAATAATAATGCTAATGCTAATACCAATTATAGCATTATTAATAGTAATAATAATAATAATAATAATAAT
AATAATTACTTAATGACCATTCTTAAAAAACTTACAACAAATGATGTTCATTCACTAATTCTTGACCCACTTGGAAACAACTTCCTTCTACATCTTCTTCAATCT
TCCCATCAAACTTTCATTAATCATCTTCTTCTCTCCCTTATCACTTCATCACAACACTTCCTACCACCCTGCCTTCATCATCTCGGACATCGAGTCGTGGTGAAG
TTAATCTCTTGTTTGAGATACCCTTGTCAACAATGGACCATTACATTGGCAATGAGTCCCCACATCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTG
CTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCCTGCTTAGAATAGCACAAAATTGCTATGAGCTGGCAAGAAATCAAGCTGGTTGTTGT
ATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTTCTCATATCCCCGTTGATACAAGATGCAGATAATCTTTCAATACATCCT
TACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGTACTTTCTATGGAC
AAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTT
CAAATTTGTACAAATCAATATGGCAATTACGTTGTCCAGACAGCCATGTCCGTTGCTAAGGGAAATGCTCATAGGTTACTTGAAAGAGCCATTAAGAGCCATTGG
TTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATCGGCCAAACTCATCATTAAGAAATTGGATGAGAATTCAAACGTAATTTTTCGTTGTCCACCT
CTGTCCTGTCAAGCATCCATCGTTAGTCCCATCTTTCGACCTACTTTTGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCTGCTCGTG
AATCCACCACCATGTAGATGCTCTGCTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTACT
TGA
Protein sequenceShow/hide protein sequence
MPLMEDDQAMLSNNNANANTNYSIINSNNNNNNNNNNYLMTILKKLTTNDVHSLILDPLGNNFLLHLLQSSHQTFINHLLLSLITSSQHFLPPCLHHLGHRVVVK
LISCLRYPCQQWTITLAMSPHILTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCYELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDADNLSIHP
YGNYVIQYMIQLDGANIGWRIINELKNKFVVLSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERAIKSHW
FVLQFHPYGKNVIASAKLIIKKLDENSNVIFRCPPLSCQASIVSPIFRPTFAHFSQHVARVDLTATVLLVNPPPCRCSASSRPFVDDQIVPSTATTDQILLLIST