; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G033010 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G033010
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionBRCT domain-containing protein
Genome locationCiama_Chr02:8368382..8368817
RNA-Seq ExpressionCaUC02G033010
SyntenyCaUC02G033010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG7874669.1 unnamed protein product, partial [Brassica rapa]1.3e-0593.1Show/hide
Query:  SGIWSSGMILALGARGPEFDSRNAPRQFF
        SGIWSSGMILALGARGPEFDSRNAP  FF
Subjt:  SGIWSSGMILALGARGPEFDSRNAPRQFF
CDY43313.1 BnaC03g58850D [Brassica napus]2.2e-0592.86Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAPRQFF
        GIWSSGMILALGARGPEFDSRNAP +FF
Subjt:  GIWSSGMILALGARGPEFDSRNAPRQFF
VDC97964.1 unnamed protein product [Brassica oleracea]2.2e-0590Show/hide
Query:  LSGIWSSGMILALGARGPEFDSRNAPRQFF
        L GIWSSGMILALGARGPEFDSRNAP  FF
Subjt:  LSGIWSSGMILALGARGPEFDSRNAPRQFF
VDC97967.1 unnamed protein product [Brassica oleracea]2.2e-0592.86Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAPRQFF
        GIWSSGMILALGARGPEFDSRNAP +FF
Subjt:  GIWSSGMILALGARGPEFDSRNAPRQFF
VDD06315.1 unnamed protein product [Brassica rapa]2.2e-0592.86Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAPRQFF
        GIWSSGMILALGARGPEFDSRNAP +FF
Subjt:  GIWSSGMILALGARGPEFDSRNAPRQFF
TrEMBL top hitse value%identityAlignment
A0A078I2F6 BnaC03g58850D protein1.0e-0592.86Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAPRQFF
        GIWSSGMILALGARGPEFDSRNAP +FF
Subjt:  GIWSSGMILALGARGPEFDSRNAPRQFF
A0A3P6B491 Uncharacterized protein1.0e-0592.86Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAPRQFF
        GIWSSGMILALGARGPEFDSRNAP +FF
Subjt:  GIWSSGMILALGARGPEFDSRNAPRQFF
A0A3P6BFV3 Uncharacterized protein1.0e-0590Show/hide
Query:  LSGIWSSGMILALGARGPEFDSRNAPRQFF
        L GIWSSGMILALGARGPEFDSRNAP  FF
Subjt:  LSGIWSSGMILALGARGPEFDSRNAPRQFF
A0A3P6C6M7 Uncharacterized protein1.0e-0592.86Show/hide
Query:  GIWSSGMILALGARGPEFDSRNAPRQFF
        GIWSSGMILALGARGPEFDSRNAP +FF
Subjt:  GIWSSGMILALGARGPEFDSRNAPRQFF
A0A6N2LY30 Uncharacterized protein1.4e-0573.68Show/hide
Query:  QQFRDQLSGIWSSGMILALGARGPEFDSRNAPRQFFTN
        QQ   +  GIWSSGMILALGARGPEFDSRNAP   F N
Subjt:  QQFRDQLSGIWSSGMILALGARGPEFDSRNAPRQFFTN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAACCAAATCTTAGCATTCTATATTTGCTTTACTTGTGTGCTCAAAATGTGTAGTTCAAGTGAAACTGTCAAACTAAAATTTGCATTGGGGATTAACTTCCAACA
GTTTAGGGATCAACTGTCAGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCGAGTTCGATTCTCGGAATGCCCCCAGACAATTTTTTACAAATT
GTCAGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAACCAAATCTTAGCATTCTATATTTGCTTTACTTGTGTGCTCAAAATGTGTAGTTCAAGTGAAACTGTCAAACTAAAATTTGCATTGGGGATTAACTTCCAACA
GTTTAGGGATCAACTGTCAGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGCGAGAGGTCCCGAGTTCGATTCTCGGAATGCCCCCAGACAATTTTTTACAAATT
GTCAGTTTTGA
Protein sequenceShow/hide protein sequence
MSNQILAFYICFTCVLKMCSSSETVKLKFALGINFQQFRDQLSGIWSSGMILALGARGPEFDSRNAPRQFFTNCQF