CuGenDBv2

Gene ID	CaUC02G033400
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Ribosomal protein L10
Genome location	Ciama_Chr02:9569647..9570126
RNA-Seq Expression	CaUC02G033400
Synteny	CaUC02G033400
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0005840 - ribosome (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

OVA11595.1 hypothetical protein BVC80_967g3 [Macleaya cordata]

9.2e-83

95.06

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Query:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
        MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCC TGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
Subjt:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD

Query:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK
        QDLLSLYGQYRSTLVDHMDVEKASD +ELETSLFHF+LPSSYL FVCSREEFD   LGIPPK
Subjt:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK

QEX95855.1 ribosomal protein L10 [Cercis canadensis]

8.3e-84

95.68

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Query:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
        MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEA+DRLEFLPSWDSMD
Subjt:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD

Query:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK
        QDLLSLYGQYRSTLVDHMDVEKASD +ELETSLFHFYLPSSYL FVCSREEFD   LGIPPK
Subjt:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK

YP_009241685.1 ribosomal protein L10 [Ziziphus jujuba]

1.9e-83

95.68

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Query:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
        MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCI YLAEEASDRLEFLPSWDSMD
Subjt:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD

Query:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK
        QDLLSLYGQYRSTLVDHMDVEKASD +ELETSLFHFYLPSSYL FVCSREEFD   LGIPPK
Subjt:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK

YP_009704688.1 ribosomal protein L10 [Tamarindus indica]

1.9e-83

95.68

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Query:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
        MPFGRSLLQ ESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
Subjt:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD

Query:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK
        QDLLSLYGQYRSTLVDHMDVEKASD +ELETSLFHFYLPSSYL FVCSREEFD   LGIPPK
Subjt:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK

YP_009913631.1 ribosomal protein L10 [Luffa acutangula]

2.1e-87

100

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Query:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
        MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
Subjt:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD

Query:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFDLGIPPK
        QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFDLGIPPK
Subjt:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFDLGIPPK

TrEMBL top hits

e value

%identity

Alignment

A0A142BZ26 Ribosomal protein L10

9.0e-84

95.68

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Query:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
        MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCI YLAEEASDRLEFLPSWDSMD
Subjt:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD

Query:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK
        QDLLSLYGQYRSTLVDHMDVEKASD +ELETSLFHFYLPSSYL FVCSREEFD   LGIPPK
Subjt:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK

A0A5J6NGS1 Ribosomal protein L10

4.0e-84

95.68

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Query:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
        MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEA+DRLEFLPSWDSMD
Subjt:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD

Query:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK
        QDLLSLYGQYRSTLVDHMDVEKASD +ELETSLFHFYLPSSYL FVCSREEFD   LGIPPK
Subjt:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK

A0A5J6NGY3 Ribosomal protein L10

4.5e-83

95.71

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Query:  MPFGRSLLQRE-SLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSM
        MPFGRSLLQRE SLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSM
Subjt:  MPFGRSLLQRE-SLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSM

Query:  DQDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK
        DQDLLSLYGQYRSTLVDHMDVEKASD +ELETSLFHFYLPSSYL FVCSREEFD   LGIPPK
Subjt:  DQDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK

A0A5J6NHS2 Ribosomal protein L10

9.0e-84

95.68

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Query:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
        MPFGRSLLQ ESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
Subjt:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD

Query:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK
        QDLLSLYGQYRSTLVDHMDVEKASD +ELETSLFHFYLPSSYL FVCSREEFD   LGIPPK
Subjt:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFD---LGIPPK

A0A7D5Y0N6 Ribosomal protein L10

1.0e-87

100

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Query:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
        MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD
Subjt:  MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMD

Query:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFDLGIPPK
        QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFDLGIPPK
Subjt:  QDLLSLYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFDLGIPPK

SwissProt top hits

e value

%identity

Alignment

P38450 Uncharacterized mitochondrial protein ymf1

2.7e-16

42.96

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Query:  EERSPEILISFHSSGSTSNQWRKLKN--PWFPGRTPFRPSCCETGKKKR---------FFAQLAHSAGPTCILYLAEEASDRL--EFLPSWDSMDQDLLS
        +++ P IL+ FH SG TS QWR++KN      G+T F+P      +KK+         + AQLA SAGPTCILYLA+EA +    + LPS  S  Q+L+ 
Subjt:  EERSPEILISFHSSGSTSNQWRKLKN--PWFPGRTPFRPSCCETGKKKR---------FFAQLAHSAGPTCILYLAEEASDRL--EFLPSWDSMDQDLLS

Query:  LYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVC
        LYGQ RST+ +HMD++KA+ L    TS+F       +L   C
Subjt:  LYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVC

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCCATTCGGAAGAAGTCTTCTACAGAGGGAAAGCCTGTTACGAGTAAGTGGAGAGGAAAGATCTCCAGAGATTCTTATCTCATTCCATTCCAGTGGCTCGACC
AGTAACCAATGGCGAAAACTCAAAAATCCATGGTTTCCCGGTAGAACCCCATTTCGCCCAAGTTGTTGCGAAACCGGAAAAAAGAAGCGGTTTTTCGCACAGCTT
GCTCATAGTGCAGGTCCCACTTGTATATTGTATTTGGCCGAAGAAGCATCGGACAGGTTGGAGTTCTTACCTTCTTGGGACTCTATGGACCAAGATCTGCTTTCA
TTATATGGGCAATACCGATCGACTTTAGTAGATCATATGGATGTAGAAAAAGCTTCGGATTTGAATGAATTGGAAACATCTCTTTTCCATTTCTATTTACCCAGT
TCATATCTTTCTTTCGTGTGTTCCCGGGAGGAATTCGATCTCGGGATACCACCTAAATAA

mRNA sequence

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Protein sequence

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MPFGRSLLQRESLLRVSGEERSPEILISFHSSGSTSNQWRKLKNPWFPGRTPFRPSCCETGKKKRFFAQLAHSAGPTCILYLAEEASDRLEFLPSWDSMDQDLLS
LYGQYRSTLVDHMDVEKASDLNELETSLFHFYLPSSYLSFVCSREEFDLGIPPK

CaUC02G033400 (gene) of Watermelon (USVL246-FR2) v1 genome