; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G033450 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G033450
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationCiama_Chr02:9593359..9605438
RNA-Seq ExpressionCaUC02G033450
SyntenyCaUC02G033450
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG71332.1 hypothetical protein EZV62_006267 [Acer yangbiense]4.8e-1650.52Show/hide
Query:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE
        AFP PA +SL ILD  K  ++P     ++   +LSALQFKR L KD S++ ++REL D E+    K P+P  ++ +L EYKDVMP +LPKKLP RRE
Subjt:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE

TXG73104.1 hypothetical protein EZV62_001683 [Acer yangbiense]3.4e-1447.42Show/hide
Query:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE
        AFP PA +SL IL+  K  ++P     ++    LSALQFKR L KD  ++ ++REL D E++     P P  ++ +L EYKDVMP +LPKKLP RRE
Subjt:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE

XP_015389229.1 uncharacterized protein LOC107178485 [Citrus sinensis]2.0e-1449.48Show/hide
Query:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE
        AFP+PA +SL ILD  K  ++P    G+  +  LSA+QFKR   KD S++ S+REL +E     +   +P  I+ VL EYKDVMP +LPKKLP RRE
Subjt:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE

XP_015579415.1 uncharacterized protein LOC107261855 [Ricinus communis]6.7e-1853Show/hide
Query:  KALAFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE
        KA A PVP+ SSLVILD  K+RVIPL++  R +  ++SALQFKR L     Y+T++REL DE++   +   LP+ IE VL +YKDVMP KLP+KL  +R+
Subjt:  KALAFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE

XP_024039421.1 LOW QUALITY PROTEIN: uncharacterized protein LOC112098046 [Citrus clementina]2.6e-1449.48Show/hide
Query:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE
        AFP+PA +SL ILD  K  ++P    G+  +  LSA+QFKR   KD S++ S+REL  E +   +   +P  I+ VL EYKDVMP +LPKKLP RRE
Subjt:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE

TrEMBL top hitse value%identityAlignment
A0A2P2K194 Uncharacterized protein LOC1056479345.0e-1953Show/hide
Query:  KALAFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE
        +ALAFPV A  SLV++D HKIRV+PL+   + +  M+SALQFKR L    SY+ ++REL D E+     P LP+ I+ VLT++KDVMP++LPKKLP +R+
Subjt:  KALAFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE

A0A438DT58 Transposon Ty3-I Gag-Pol polyprotein4.1e-1345.19Show/hide
Query:  LRKALAFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRL-GKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPA
        L+K  A P+P   S+ IL++ K  ++P    G  + PMLSA+Q K+ L  K+ +Y+T+++E +D+  E     P+PK IE VL E+KDVMP +LPK+LP 
Subjt:  LRKALAFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRL-GKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPA

Query:  RREE
        RREE
Subjt:  RREE

A0A5C7INR4 Uncharacterized protein4.8e-1448.45Show/hide
Query:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE
        AFP    +SL ILD  K  ++P+    +M    LS LQFKR +  D S++T++REL D E+    K P+P  ++ VL EYKDVMP +LPKKLP RRE
Subjt:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE

A0A5C7ISI1 Uncharacterized protein2.3e-1650.52Show/hide
Query:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE
        AFP PA +SL ILD  K  ++P     ++   +LSALQFKR L KD S++ ++REL D E+    K P+P  ++ +L EYKDVMP +LPKKLP RRE
Subjt:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE

A0A5C7IW54 Uncharacterized protein1.7e-1447.42Show/hide
Query:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE
        AFP PA +SL IL+  K  ++P     ++    LSALQFKR L KD  ++ ++REL D E++     P P  ++ +L EYKDVMP +LPKKLP RRE
Subjt:  AFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLPARRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGTTCAGTTGAGGACGAAAGAATCTCGCTTAAGGAAAGCTTTGGCCTTCCCGGTCCCCGCCTATAGCTCCCTCGTGATCCTTGATGATCATAAAATAAGGGT
CATTCCTTTAAGGAACGGAGGCAGGATGAGGGACCCCATGTTATCGGCTCTCCAATTCAAAAGAAGACTCGGGAAGGACACAAGCTACATTACTTCAGTTAGAGAACTGC
AAGATGAAGAAGAAGAGAACCACGCCAAGCCACCCTTGCCAAAATGCATTGAGGAGGTGCTTACCGAATACAAGGATGTGATGCCCGCCAAGCTCCCAAAGAAATTACCC
GCACGACGAGAAGAACCCCTTCGCCGCGGTGTAGGTGCTGTCTCGCTTTCACTCGGTGGGTCTTGCTCCCACTCGGAGGGTCTTAATCTTGCTCAGAAGGTCTTGATCTC
ACTCGGAAGGTCTCGCTCTCGCTCGAGTAGGTCTCGCTCGTCTTTGCTTCATTGCCGCCTCCCAATTTCAGATTTGGTTAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGTTCAGTTGAGGACGAAAGAATCTCGCTTAAGGAAAGCTTTGGCCTTCCCGGTCCCCGCCTATAGCTCCCTCGTGATCCTTGATGATCATAAAATAAGGGT
CATTCCTTTAAGGAACGGAGGCAGGATGAGGGACCCCATGTTATCGGCTCTCCAATTCAAAAGAAGACTCGGGAAGGACACAAGCTACATTACTTCAGTTAGAGAACTGC
AAGATGAAGAAGAAGAGAACCACGCCAAGCCACCCTTGCCAAAATGCATTGAGGAGGTGCTTACCGAATACAAGGATGTGATGCCCGCCAAGCTCCCAAAGAAATTACCC
GCACGACGAGAAGAACCCCTTCGCCGCGGTGTAGGTGCTGTCTCGCTTTCACTCGGTGGGTCTTGCTCCCACTCGGAGGGTCTTAATCTTGCTCAGAAGGTCTTGATCTC
ACTCGGAAGGTCTCGCTCTCGCTCGAGTAGGTCTCGCTCGTCTTTGCTTCATTGCCGCCTCCCAATTTCAGATTTGGTTAGGTAA
Protein sequenceShow/hide protein sequence
MSSVQLRTKESRLRKALAFPVPAYSSLVILDDHKIRVIPLRNGGRMRDPMLSALQFKRRLGKDTSYITSVRELQDEEEENHAKPPLPKCIEEVLTEYKDVMPAKLPKKLP
ARREEPLRRGVGAVSLSLGGSCSHSEGLNLAQKVLISLGRSRSRSSRSRSSLLHCRLPISDLVR