; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G033500 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G033500
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description50S ribosomal protein L2, chloroplastic
Genome locationCiama_Chr02:9665631..9667576
RNA-Seq ExpressionCaUC02G033500
SyntenyCaUC02G033500
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016740 - transferase activity (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69974.1 hypothetical protein Prudu_1306S000300, partial [Prunus dulcis]3.4e-16783.7Show/hide
Query:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------------------------------------------------------HRCGK
        + VFTDKSIRLLGKNQYTSNVESGSTRTEIKHW ELFFGVK                                                      HRCGK
Subjt:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------------------------------------------------------HRCGK

Query:  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSR
        GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSR
Subjt:  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSR

Query:  KPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGR
        KPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLG+
Subjt:  KPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGR

Query:  AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRS
        AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR+
Subjt:  AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRS

KAF6138377.1 hypothetical protein GIB67_037667 [Kingdonia uniflora]5.8e-16795.53Show/hide
Query:  VFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYG
        VFTDKSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVK  CGKGRNARGIIT  HRGGGHKRLYRKIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYG
Subjt:  VFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYG

Query:  DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAK
        DGEKRYILHPRGAIIGDTIVSGTEVPI MGNALPLSAISS TSRKPYALEEACTVWEGVLIDQKEESTST+MPLGTAIHNIEITLGKGGQLARAAGAVAK
Subjt:  DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAK

Query:  LIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRN
        LIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSK WLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALG+RSRKRN
Subjt:  LIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRN

Query:  KYSDNLILRRRSK
        KYSD+LILRRRSK
Subjt:  KYSDNLILRRRSK

KAG6735406.1 hypothetical protein POTOM_062054 [Populus tomentosa]9.8e-16794.64Show/hide
Query:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIH
        + V TDKSIRLL KNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITA HRGGGHKRLYRKIDFRRNEK IYGRIVTIEYDPNRNAYICLIH
Subjt:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIH

Query:  YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSA--ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAG
        YGDGEKRYILHPRGAIIGDTI+SGTEVPIKMGNALPLSA      T  KPYALEEACTVWE VLIDQKEESTSTDMPLGTAIHNIEITLG+GGQLARAAG
Subjt:  YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSA--ISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAG

Query:  AVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRS
        AVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRS
Subjt:  AVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRS

Query:  RKRNKYSDNLILRRRSK
        RKRNKYSDNLILRRRSK
Subjt:  RKRNKYSDNLILRRRSK

KAG6758775.1 hypothetical protein POTOM_035235 [Populus tomentosa]1.7e-16695.24Show/hide
Query:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIH
        + V TDKSIRLL KNQYTSNVESGSTRTEIKH VELFFGVKHRCGKGRNARGIITA HRGGGHKRLYRKIDFRRNEK IYGRIVTIEYDPNRNAYICLIH
Subjt:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIH

Query:  YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAV
        YGDGEKRYILHPRGAIIGDTI+SGTEVPIKMGNALPLSAISSST RKPYALEEACTVWE VLIDQKEESTSTD+PLGTAIHNIEITLG+GGQLARA GAV
Subjt:  YGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAV

Query:  AKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRK
        AKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG GEGRA IGRKKPATPWGYPALGRRSRK
Subjt:  AKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRK

Query:  RNKYSDNLILRRRSK
        RNKYSDNLILRRRSK
Subjt:  RNKYSDNLILRRRSK

RZC57988.1 hypothetical protein C5167_005297 [Papaver somniferum]2.3e-15574.81Show/hide
Query:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------HR---------------------------------------------------
        + VFTDKSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVK      HR                                                   
Subjt:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------HR---------------------------------------------------

Query:  -------------------------------CGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP
                                       CGKGRNARGIITA HRGGGHKRLYRKIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHP
Subjt:  -------------------------------CGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP

Query:  RGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT
        RGAIIGDTIVSGTEVPI MGNALPLSAIS  TSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT
Subjt:  RGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT

Query:  LKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRR
        LKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSK WLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK+P TPWGYPALGRRSRKRNKYSD+LILRR
Subjt:  LKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRR

Query:  R
        R
Subjt:  R

TrEMBL top hitse value%identityAlignment
A0A4Y7JDX5 Ribosomal_L2_C domain-containing protein1.1e-15574.81Show/hide
Query:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------HR---------------------------------------------------
        + VFTDKSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVK      HR                                                   
Subjt:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------HR---------------------------------------------------

Query:  -------------------------------CGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP
                                       CGKGRNARGIITA HRGGGHKRLYRKIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHP
Subjt:  -------------------------------CGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHP

Query:  RGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT
        RGAIIGDTIVSGTEVPI MGNALPLSAIS  TSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT
Subjt:  RGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT

Query:  LKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRR
        LKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSK WLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK+P TPWGYPALGRRSRKRNKYSD+LILRR
Subjt:  LKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRR

Query:  R
        R
Subjt:  R

A0A4Y7KDM0 Ribosomal_L2_C domain-containing protein3.5e-15480.89Show/hide
Query:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------HR---------------------------------------CGKGRNARGIIT
        + +FTDKSIRLLG NQYT NVESGSTRTEIKHWVELFFGVK      HR                                       CGKGRN RGIIT
Subjt:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------HR---------------------------------------CGKGRNARGIIT

Query:  AGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEAC
        A HRGGGHKRLY KIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRG IIGDTIVSGTEVPI MGNALPLSAIS  TSRKPYALEEAC
Subjt:  AGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEAC

Query:  TVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGK
        TVWE VLIDQKEESTST MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL SGEVRLISK CSATVGQVGN GVNQKSLGR GSKCWLGK
Subjt:  TVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGK

Query:  RPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALG-RRSRKRNKYSDNLILRRRSK
        RPVVRGVVMNPVDHPHGGGEGRAPIGRK+P TPWGYPALG RRSRKRNKYSD+LILRRR+K
Subjt:  RPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALG-RRSRKRNKYSDNLILRRRSK

A0A5H2XTF6 Ribosomal_L2_C domain-containing protein (Fragment)1.6e-16783.7Show/hide
Query:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------------------------------------------------------HRCGK
        + VFTDKSIRLLGKNQYTSNVESGSTRTEIKHW ELFFGVK                                                      HRCGK
Subjt:  WCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVK------------------------------------------------------HRCGK

Query:  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSR
        GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSR
Subjt:  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSR

Query:  KPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGR
        KPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLG+
Subjt:  KPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGR

Query:  AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRS
        AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR+
Subjt:  AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRS

A0A6J5WEB6 Ribosomal_L2_C domain-containing protein3.9e-15392.62Show/hide
Query:  TSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII
        T +  +G+  ++      L +G +HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII
Subjt:  TSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAII

Query:  GDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS
        GDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS
Subjt:  GDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS

Query:  GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        GEVRLISKNCSATVGQVGN GVNQKSLG+AGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

A0A7J7LS59 Ribosomal_L2_C domain-containing protein2.8e-16795.53Show/hide
Query:  VFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYG
        VFTDKSIRLLG NQYTSNVESGSTRTEIKHWVELFFGVK  CGKGRNARGIIT  HRGGGHKRLYRKIDFRRNEKDI GRIVTIEYDPNRNAYICLIHYG
Subjt:  VFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYG

Query:  DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAK
        DGEKRYILHPRGAIIGDTIVSGTEVPI MGNALPLSAISS TSRKPYALEEACTVWEGVLIDQKEESTST+MPLGTAIHNIEITLGKGGQLARAAGAVAK
Subjt:  DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAK

Query:  LIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRN
        LIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSK WLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALG+RSRKRN
Subjt:  LIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRN

Query:  KYSDNLILRRRSK
        KYSD+LILRRRSK
Subjt:  KYSDNLILRRRSK

SwissProt top hitse value%identityAlignment
B1A976 50S ribosomal protein L2, chloroplastic1.3e-12985.71Show/hide
Query:  LFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL
        L +G +HRCGKGRNARGIITA HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL
Subjt:  LFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL

Query:  PLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG
        PL                                  TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG
Subjt:  PLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG

Query:  NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        N GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

B1NWJ1 50S ribosomal protein L2, chloroplastic1.0e-12980.46Show/hide
Query:  KNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPR
        +N    +    +TR   K+   L +G +HRCGKGRNARGIITA HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPR
Subjt:  KNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPR

Query:  GAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL
        GAIIGDTI+SGTEVPIKMGNALPL                                  TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL
Subjt:  GAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL

Query:  KLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR
        KLPSGEVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR
Subjt:  KLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRR

Query:  SK
        SK
Subjt:  SK

Q09MB2 50S ribosomal protein L2, chloroplastic7.7e-13080.33Show/hide
Query:  TSNVESGSTRTEIKH--WVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGA
        T +  +G+  +++K      L +G +HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGA
Subjt:  TSNVESGSTRTEIKH--WVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGA

Query:  IIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL
        IIGDTIVSGTEVPIKMGNALPL                                  TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL
Subjt:  IIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL

Query:  PSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        PSGEVRLISKNCSATVGQVGN G NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K
Subjt:  PSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Q0ZIX7 50S ribosomal protein L2, chloroplastic4.5e-13085.71Show/hide
Query:  LFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL
        L +G +HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL
Subjt:  LFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNAL

Query:  PLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG
        PL                                  TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG
Subjt:  PLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG

Query:  NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        N GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Q4VZK5 50S ribosomal protein L2, chloroplastic1.8e-13181.67Show/hide
Query:  TSNVESGSTRTEIKH--WVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGA
        T +  +G+  +++K      L +G +HRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGA
Subjt:  TSNVESGSTRTEIKH--WVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGA

Query:  IIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL
        IIGDTIVSGTEVPIKMGNALPL                                  TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL
Subjt:  IIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKL

Query:  PSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        PSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  PSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Arabidopsis top hitse value%identityAlignment
AT2G44065.1 Ribosomal protein L2 family1.1e-2548.41Show/hide
Query:  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        M +GT IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G V N     K L +AG   WLG RP VRGV MNP DHPHG
Subjt:  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

Query:  GGEGRAPIGRKKPAT---PWGYPALG
        GGEG++     +  T   PWG P  G
Subjt:  GGEGRAPIGRKKPAT---PWGYPALG

AT2G44065.2 Ribosomal protein L2 family1.1e-2548.41Show/hide
Query:  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        M +GT IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+  C AT+G V N     K L +AG   WLG RP VRGV MNP DHPHG
Subjt:  MPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

Query:  GGEGRAPIGRKKPAT---PWGYPALG
        GGEG++     +  T   PWG P  G
Subjt:  GGEGRAPIGRKKPAT---PWGYPALG

AT3G51190.1 Ribosomal protein L2 family3.3e-1930.45Show/hide
Query:  HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGD-----GEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALE
        HR G  K  +R +D+      + G +  I +DP R A +  + +        +K   +   G   G  +  G +  + +GN LPL +I            
Subjt:  HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGD-----GEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALE

Query:  EACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGS-
                              P G  I N+E+ +G  G LARA+G  A +IA   +S T  +KLPSG  +++   C A +GQV   G  +K L +AG+ 
Subjt:  EACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT--LKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGS-

Query:  --------KCWLGKRPVVRGVVMNPVDHPHGGGE----GRAPIGR--KKPATPWGYPALGRRSRKR
                 CW    PVVRGV MNPV+HPHGGG     G A   R  K      G  A  R  R+R
Subjt:  --------KCWLGKRPVVRGVVMNPVDHPHGGGE----GRAPIGR--KKPATPWGYPALGRRSRKR

ATCG00830.1 ribosomal protein L22.4e-12683.64Show/hide
Query:  KHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAI
        +H CGKGRNARGIITA HRGGGHKRLYRKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL   
Subjt:  KHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAI

Query:  SSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVN
                                       TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVN
Subjt:  SSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVN

Query:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Subjt:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

ATCG01310.1 ribosomal protein L22.4e-12683.64Show/hide
Query:  KHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAI
        +H CGKGRNARGIITA HRGGGHKRLYRKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPL   
Subjt:  KHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAI

Query:  SSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVN
                                       TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN GVN
Subjt:  SSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVN

Query:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Subjt:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCTGTATCGATGGAATCTCATCATCCATACATAACGAATTGGTGTGTATTTACAGACAAAAGTATTCGGTTA
TTGGGGAAAAATCAATATACTTCTAATGTCGAATCAGGATCAACTAGGACAGAAATAAAGCATTGGGTCGAACTCTTCTTTGGTGTCAAGCATCGTTGTGGTAAA
GGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGT
AGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATA
ATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGATATCATCATCTACATCCAGAAAGCCGTATGCTTTG
GAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACA
CTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGT
TTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGT
CCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTAT
CCTGCACTTGGAAGAAGAAGTCGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACCCTCCAATAAGTCTATTGGAATTGGCTCTGTATCGATGGAATCTCATCATCCATACATAACGAATTGGTGTGTATTTACAGACAAAAGTATTCGGTTA
TTGGGGAAAAATCAATATACTTCTAATGTCGAATCAGGATCAACTAGGACAGAAATAAAGCATTGGGTCGAACTCTTCTTTGGTGTCAAGCATCGTTGTGGTAAA
GGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGT
AGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATA
ATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGATATCATCATCTACATCCAGAAAGCCGTATGCTTTG
GAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACA
CTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGT
TTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGT
CCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTAT
CCTGCACTTGGAAGAAGAAGTCGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA
Protein sequenceShow/hide protein sequence
MGPSNKSIGIGSVSMESHHPYITNWCVFTDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYG
RIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEIT
LGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGY
PALGRRSRKRNKYSDNLILRRRSK