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CaUC02G034100 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G034100
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Genome locationCiama_Chr02:10785046..10791305
RNA-Seq ExpressionCaUC02G034100
SyntenyCaUC02G034100
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019401 - Zinc finger, CHCC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148513.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Momordica charantia]5.1e-5094.17Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSSK PSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_022943963.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita moschata]1.0e-5098.06Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_022986645.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Cucurbita maxima]1.3e-5098.06Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSK PSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_023511819.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like [Cucurbita pepo subsp. pepo]3.5e-5199.03Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
XP_038900460.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Benincasa hispida]4.6e-5198.06Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSSARNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGD+NPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
TrEMBL top hitse value%identityAlignment
A0A0A0LNG2 zf-CHCC domain-containing protein2.3e-4893.2Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFK L+ESSS IPSS RNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKV GRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQ 
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A1S3CI88 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial9.4e-5095.15Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFK L+ESSS IPSS RNLSLV+NQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1D4A8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial2.5e-5094.17Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MAS+LFK ++ESSSK PSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRI+ACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1FXJ3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial5.0e-5198.06Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSKIPSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNP LGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
A0A6J1JEL4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial6.5e-5198.06Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
        MASSLFKALVESSSK PSSAR+LSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQD

Query:  HHH
        HHH
Subjt:  HHH
SwissProt top hitse value%identityAlignment
Q9M9M6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial1.1e-3971.17Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L KAL+ S   +PSS RN S+ + Q        +G HTAKWMQD SKKSPMELI+EVPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH
Arabidopsis top hitse value%identityAlignment
AT3G03070.1 NADH-ubiquinone oxidoreductase-related7.9e-4171.17Show/hide
Query:  MASSLFKALVESSSKIPSSARNLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY
        MAS+L KAL+ S   +PSS RN S+ + Q        +G HTAKWMQD SKKSPMELI+EVPPIKV+GRIVACEGD+NPALGHPIEFICLD  EPA+CKY
Subjt:  MASSLFKALVESSSKIPSSARNLSLVSNQ--------IGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKY

Query:  CGLRYTQDHHH
        CGLRY QDHHH
Subjt:  CGLRYTQDHHH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAGTCTGTTCAAAGCGCTTGTTGAATCTTCCTCCAAAATCCCATCTTCGGCTAGAAATCTGAGTCTTGTTAGCAATCAAATCGGCCAGCACACCGCCAAATG
GATGCAGGATACAAGTAAGAAATCACCGATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCGAAGGCCGTATCGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTG
GACATCCAATCGAGTTCATATGCCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGGTATACTCAGGACCATCATCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGAGTCTGTTCAAAGCGCTTGTTGAATCTTCCTCCAAAATCCCATCTTCGGCTAGAAATCTGAGTCTTGTTAGCAATCAAATCGGCCAGCACACCGCCAAATG
GATGCAGGATACAAGTAAGAAATCACCGATGGAGTTGATCAACGAGGTTCCACCAATCAAGGTCGAAGGCCGTATCGTTGCTTGTGAGGGAGACAGCAATCCTGCCCTTG
GACATCCAATCGAGTTCATATGCCTCGATCGGGAGGAGCCTGCCGTGTGCAAGTACTGTGGCCTGCGGTATACTCAGGACCATCATCACTAG
Protein sequenceShow/hide protein sequence
MASSLFKALVESSSKIPSSARNLSLVSNQIGQHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDSNPALGHPIEFICLDREEPAVCKYCGLRYTQDHHH