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CaUC02G034200 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G034200
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDUF4283 domain-containing protein
Genome locationCiama_Chr02:11137211..11139747
RNA-Seq ExpressionCaUC02G034200
SyntenyCaUC02G034200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33672.1 hypothetical protein [Cucumis melo subsp. melo]7.6e-0437.5Show/hide
Query:  WDEDTLKFIGDHCGGFNETARKTLSRLGLVEASKRVKPNRTGFTPAEVWIASSSSSSIFVQIDPFFVVENHIGFLDGIHG
        W+ ++   IGD CGGF E A++T     L+EAS RVK N +GF PA + +      S  +Q+      + H+G    IHG
Subjt:  WDEDTLKFIGDHCGGFNETARKTLSRLGLVEASKRVKPNRTGFTPAEVWIASSSSSSIFVQIDPFFVVENHIGFLDGIHG

QWT43305.1 kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris]1.1e-1539.68Show/hide
Query:  NGGINKLLIPAGEDRKVDQAILRCENEEQVATSARLKTDKNPQSNKWDEDTLKFIGDHCGGFNETARKTLSRLGLVEASKRVKPNRTGFTPAEVWIASSS
        N  +N LL PAG++       LR   + QV +       +N   ++W  DT K IG+ CGG+ ET++KTL+R+ ++EAS +VK N+ GF PA + + S+S
Subjt:  NGGINKLLIPAGEDRKVDQAILRCENEEQVATSARLKTDKNPQSNKWDEDTLKFIGDHCGGFNETARKTLSRLGLVEASKRVKPNRTGFTPAEVWIASSS

Query:  SSSIFVQIDPFFVVENHIGFLDGIHG
        + S+ VQ+DPFF ++ HIG++  + G
Subjt:  SSSIFVQIDPFFVVENHIGFLDGIHG

RVW88719.1 hypothetical protein CK203_043797 [Vitis vinifera]4.5e-0444.26Show/hide
Query:  GRDSPTMTLIDRFLVTDPILTKFKEATVKCLDRPTLDHFPLWLQLGSIRWGPLPFCLRTCG
        G ++ +   +DRFLV    L +F       L RP  DHFP+ L+ G +R GP PF LRTCG
Subjt:  GRDSPTMTLIDRFLVTDPILTKFKEATVKCLDRPTLDHFPLWLQLGSIRWGPLPFCLRTCG

RVW95846.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.6e-0440.91Show/hide
Query:  RDSPTMTLIDRFLVTDPILTKFKEATVKCLDRPTLDHFPLWLQLGSIRWGPLPFCLRTCGWSIVLS
        ++SP    +DRFL ++     F + T + L R T DH+P+ L      WGP PF LRTCG +I++S
Subjt:  RDSPTMTLIDRFLVTDPILTKFKEATVKCLDRPTLDHFPLWLQLGSIRWGPLPFCLRTCGWSIVLS

TrEMBL top hitse value%identityAlignment
A0A438EIB2 Putative ribonuclease H protein6.3e-0436.36Show/hide
Query:  RDSPTMTLIDRFLVTDPILTKFKEATVKCLDRPTLDHFPLWLQLGSIRWGPLPFCLRTCGWSIVLS
        ++SP    +DRFL ++     F ++  + L + T DH+P+ L     +WGP PF LR CG +I++S
Subjt:  RDSPTMTLIDRFLVTDPILTKFKEATVKCLDRPTLDHFPLWLQLGSIRWGPLPFCLRTCGWSIVLS

A0A438HW93 DUF4283 domain-containing protein2.2e-0444.26Show/hide
Query:  GRDSPTMTLIDRFLVTDPILTKFKEATVKCLDRPTLDHFPLWLQLGSIRWGPLPFCLRTCG
        G ++ +   +DRFLV    L +F       L RP  DHFP+ L+ G +R GP PF LRTCG
Subjt:  GRDSPTMTLIDRFLVTDPILTKFKEATVKCLDRPTLDHFPLWLQLGSIRWGPLPFCLRTCG

A0A438IGH3 Transposon TX1 uncharacterized 149 kDa protein1.3e-0440.91Show/hide
Query:  RDSPTMTLIDRFLVTDPILTKFKEATVKCLDRPTLDHFPLWLQLGSIRWGPLPFCLRTCGWSIVLS
        ++SP    +DRFL ++     F + T + L R T DH+P+ L      WGP PF LRTCG +I++S
Subjt:  RDSPTMTLIDRFLVTDPILTKFKEATVKCLDRPTLDHFPLWLQLGSIRWGPLPFCLRTCGWSIVLS

E5GB30 DUF4283 domain-containing protein3.7e-0437.5Show/hide
Query:  WDEDTLKFIGDHCGGFNETARKTLSRLGLVEASKRVKPNRTGFTPAEVWIASSSSSSIFVQIDPFFVVENHIGFLDGIHG
        W+ ++   IGD CGGF E A++T     L+EAS RVK N +GF PA + +      S  +Q+      + H+G    IHG
Subjt:  WDEDTLKFIGDHCGGFNETARKTLSRLGLVEASKRVKPNRTGFTPAEVWIASSSSSSIFVQIDPFFVVENHIGFLDGIHG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTAGACAACAATGGAGGCATAAACAAGCTATTGATTCCTGCAGGTGAAGACAGAAAAGTCGATCAAGCTATTTTGCGCTGTGAAAATGAAGAACAGGTGGCTAC
CTCTGCAAGATTAAAGACTGATAAAAATCCGCAATCTAACAAATGGGACGAAGACACCTTAAAGTTTATCGGAGACCATTGTGGAGGCTTTAATGAAACTGCGAGGAAGA
CATTATCTAGATTGGGTTTGGTGGAGGCTTCTAAAAGGGTAAAGCCTAATCGCACAGGCTTCACACCAGCAGAGGTTTGGATTGCATCATCCTCTTCTTCTTCTATTTTC
GTACAAATTGATCCTTTCTTTGTGGTAGAAAACCACATTGGTTTTTTGGACGGAATCCATGGAAACTTGTTGTCGATAAATGCAATCGTTGATCAACATGTGCCAGATCA
GAGAGGCATCCTCAGCCTTTTCCCTGGTGATGTGACCCATGGACCAAAGGACACTGATTTTGCAGGAAAGGATGACCTTCCTAAGATAGAGCCAACCCAAATCTCTTCTT
CTACCCTACTCGACCCATCTACAACAATCACTTCCTCGAATCCTCGCAGCATCACCATAAAGGATAACCATACACTCTTTGTGCCGGGAAACAAATTTTCCAAAAACCCA
CCTATACTCGAAGACATCAACACAGGCGACTACCTCTCCAGCCCCATACCTCTTACCATTGCTCCCCCTATCTCTCCCCCTTCTACACCTCTGATGCTACCTGACTTGAT
AGTTGGTCAAGCATTAATGGAACGGACAATCTTCTTTATCATGATCATTATCTCCCGGAATGTTAGAGACTTCAAAGAGAGCCCAACACCATTTCGTTCAATTGTTTTCT
TATCCAGTCTATATGGAGCTCTTGCAATATTGGATGGACTTCTTTGGAAGCAAACAAATCTGTGGGAGGGGTCCACAGACCCTGTCGATATAGGGATAGACCTTTTGGCA
GGAATTGGACGACTTATCTGCCTTGTGTTTAGACTCTTGGATTTTGGGAGGGACTCTCCCACTATGACTTTGATCGACAGATTTCTTGTTACAGATCCCATTTTGACAAA
ATTCAAGGAGGCCACTGTGAAGTGTCTTGACAGACCTACATTAGACCACTTCCCGCTTTGGCTTCAGTTGGGTTCCATTAGATGGGGTCCCCTACCTTTCTGTTTGAGAA
CATGTGGATGGAGCATTGTTCTTTCCACCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTAGACAACAATGGAGGCATAAACAAGCTATTGATTCCTGCAGGTGAAGACAGAAAAGTCGATCAAGCTATTTTGCGCTGTGAAAATGAAGAACAGGTGGCTAC
CTCTGCAAGATTAAAGACTGATAAAAATCCGCAATCTAACAAATGGGACGAAGACACCTTAAAGTTTATCGGAGACCATTGTGGAGGCTTTAATGAAACTGCGAGGAAGA
CATTATCTAGATTGGGTTTGGTGGAGGCTTCTAAAAGGGTAAAGCCTAATCGCACAGGCTTCACACCAGCAGAGGTTTGGATTGCATCATCCTCTTCTTCTTCTATTTTC
GTACAAATTGATCCTTTCTTTGTGGTAGAAAACCACATTGGTTTTTTGGACGGAATCCATGGAAACTTGTTGTCGATAAATGCAATCGTTGATCAACATGTGCCAGATCA
GAGAGGCATCCTCAGCCTTTTCCCTGGTGATGTGACCCATGGACCAAAGGACACTGATTTTGCAGGAAAGGATGACCTTCCTAAGATAGAGCCAACCCAAATCTCTTCTT
CTACCCTACTCGACCCATCTACAACAATCACTTCCTCGAATCCTCGCAGCATCACCATAAAGGATAACCATACACTCTTTGTGCCGGGAAACAAATTTTCCAAAAACCCA
CCTATACTCGAAGACATCAACACAGGCGACTACCTCTCCAGCCCCATACCTCTTACCATTGCTCCCCCTATCTCTCCCCCTTCTACACCTCTGATGCTACCTGACTTGAT
AGTTGGTCAAGCATTAATGGAACGGACAATCTTCTTTATCATGATCATTATCTCCCGGAATGTTAGAGACTTCAAAGAGAGCCCAACACCATTTCGTTCAATTGTTTTCT
TATCCAGTCTATATGGAGCTCTTGCAATATTGGATGGACTTCTTTGGAAGCAAACAAATCTGTGGGAGGGGTCCACAGACCCTGTCGATATAGGGATAGACCTTTTGGCA
GGAATTGGACGACTTATCTGCCTTGTGTTTAGACTCTTGGATTTTGGGAGGGACTCTCCCACTATGACTTTGATCGACAGATTTCTTGTTACAGATCCCATTTTGACAAA
ATTCAAGGAGGCCACTGTGAAGTGTCTTGACAGACCTACATTAGACCACTTCCCGCTTTGGCTTCAGTTGGGTTCCATTAGATGGGGTCCCCTACCTTTCTGTTTGAGAA
CATGTGGATGGAGCATTGTTCTTTCCACCCTTTGA
Protein sequenceShow/hide protein sequence
MKLDNNGGINKLLIPAGEDRKVDQAILRCENEEQVATSARLKTDKNPQSNKWDEDTLKFIGDHCGGFNETARKTLSRLGLVEASKRVKPNRTGFTPAEVWIASSSSSSIF
VQIDPFFVVENHIGFLDGIHGNLLSINAIVDQHVPDQRGILSLFPGDVTHGPKDTDFAGKDDLPKIEPTQISSSTLLDPSTTITSSNPRSITIKDNHTLFVPGNKFSKNP
PILEDINTGDYLSSPIPLTIAPPISPPSTPLMLPDLIVGQALMERTIFFIMIIISRNVRDFKESPTPFRSIVFLSSLYGALAILDGLLWKQTNLWEGSTDPVDIGIDLLA
GIGRLICLVFRLLDFGRDSPTMTLIDRFLVTDPILTKFKEATVKCLDRPTLDHFPLWLQLGSIRWGPLPFCLRTCGWSIVLSTL