| GenBank top hits | e value | %identity | Alignment |
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| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 2.2e-257 | 88.97 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ QVS TK+V+IAK SA+F PSYP SNRH QCIKA+KEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGK KKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
+SEE+L H+EVVRLSKKIKVGLALEE KT RLKERL CEPSEEQLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVM
Subjt: LSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
Query: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNM
Subjt: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Query: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVN+LIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSR
Subjt: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Query: ERVRQVGLVALEKLKKAAKTRKMEAI
ERVRQVGLVALEKLKKAAK RKMEA+
Subjt: ERVRQVGLVALEKLKKAAKTRKMEAI
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| XP_004151855.1 RNA polymerase sigma factor sigA [Cucumis sativus] | 2.9e-257 | 89.75 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVS +K+V+IAKSSANF P YP SNRHS QCIKA+KEHV+TPSSP AEPW HNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTDTP+ K LKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
LLSEELLSHAEVVRLSKKIKVGL LEERKT RLK+RLGCEPSE+QLAISLKISRAELRSR+ME SLAREKLAMSNVRLV
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Query: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLN
Subjt: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Query: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
MSKKKV+NATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Subjt: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Query: RERVRQVGLVALEKLKKAAKTRKMEAI
RERVRQVGLVALEKLKKAAKTRKMEA+
Subjt: RERVRQVGLVALEKLKKAAKTRKMEAI
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 9.9e-266 | 92.03 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVSPTK+V+IAKSSANF PSYPLSNRHS QCIKA+KEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR K LKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
LLSEELLSHAEVVRLSKKIKVGLALEE KT RLKERLGCEPSE+QLAISLKISRAELRSR+MECSLAREKLAMSNVRLV
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Query: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLN
Subjt: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Query: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Subjt: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Query: RERVRQVGLVALEKLKKAAKTRKMEAI
RERVRQVGLVALEKLKKAAKTRKMEA+
Subjt: RERVRQVGLVALEKLKKAAKTRKMEAI
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 1.3e-257 | 88.97 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ QVS TK+V+IAK SA+F PSYP SNRH QCIKA+KEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGK KKVPVTCSGVSARQRRMSSKRKIQSKH F+AQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
+SEE+L H+EVVRLSKKIKVGLALEE KT RLKERL CEPSEEQLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVM
Subjt: LSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
Query: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNM
Subjt: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Query: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVN+LIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSR
Subjt: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Query: ERVRQVGLVALEKLKKAAKTRKMEAI
ERVRQVGLVALEKLKKAAK RKMEA+
Subjt: ERVRQVGLVALEKLKKAAKTRKMEAI
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 3.6e-268 | 92.79 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYA-NDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILY NDHRLGQTQVSPTK+V+IAKSSANF PSYP SNRHSQCIKA+KEHVDTPSSPTAEPWLHNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYA-NDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGK KKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
LLSEELLSHAEVVRLSKKIKVGLALEERKT RLKERLGCEPSE+QLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Query: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Subjt: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Query: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Subjt: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Query: RERVRQVGLVALEKLKKAAKTRKMEAI
RERVRQVGLVALEKLKKAAKTRKMEA+
Subjt: RERVRQVGLVALEKLKKAAKTRKMEAI
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0LQR2 RNA_pol_sigma70 domain-containing protein | 1.4e-257 | 89.75 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVS +K+V+IAKSSANF P YP SNRHS QCIKA+KEHV+TPSSP AEPW HNTT WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTDTP+ K LKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
LLSEELLSHAEVVRLSKKIKVGL LEERKT RLK+RLGCEPSE+QLAISLKISRAELRSR+ME SLAREKLAMSNVRLV
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Query: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLN
Subjt: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Query: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
MSKKKV+NATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Subjt: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Query: RERVRQVGLVALEKLKKAAKTRKMEAI
RERVRQVGLVALEKLKKAAKTRKMEA+
Subjt: RERVRQVGLVALEKLKKAAKTRKMEAI
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| A0A1S4E4N5 RNA polymerase sigma factor sigA | 4.8e-266 | 92.03 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVSPTK+V+IAKSSANF PSYPLSNRHS QCIKA+KEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR K LKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
LLSEELLSHAEVVRLSKKIKVGLALEE KT RLKERLGCEPSE+QLAISLKISRAELRSR+MECSLAREKLAMSNVRLV
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Query: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLN
Subjt: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Query: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Subjt: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Query: RERVRQVGLVALEKLKKAAKTRKMEAI
RERVRQVGLVALEKLKKAAKTRKMEA+
Subjt: RERVRQVGLVALEKLKKAAKTRKMEAI
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 4.8e-266 | 92.03 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYAND+RLGQTQVSPTK+V+IAKSSANF PSYPLSNRHS QCIKA+KEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHS-QCIKALKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR K LKKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
LLSEELLSHAEVVRLSKKIKVGLALEE KT RLKERLGCEPSE+QLAISLKISRAELRSR+MECSLAREKLAMSNVRLV
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLV
Query: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLN
Subjt: MSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLN
Query: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Subjt: MSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Query: RERVRQVGLVALEKLKKAAKTRKMEAI
RERVRQVGLVALEKLKKAAKTRKMEA+
Subjt: RERVRQVGLVALEKLKKAAKTRKMEAI
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| A0A6J1D604 RNA polymerase sigma factor sigA | 4.1e-257 | 88.78 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYANDHRLGQ+QVSPTK+V+IAKSSANF PS+P SNRH+QCIKA+KEHVDTPSSPT EPWL N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD RG+ KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
+SEELLSHAEVVRLSKKIKVGLALEERKT RLKERLGCEPSE+QLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVM
Subjt: LSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
Query: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Subjt: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Query: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVN+LIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Subjt: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Query: ERVRQVGLVALEKLKKAAKTRKMEAI
ERVRQVGLVALEKLKKAAKTRKMEA+
Subjt: ERVRQVGLVALEKLKKAAKTRKMEAI
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 6.9e-257 | 88.78 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ QVS TK V+IAK SA+F PSY SNRH QCIKA+KEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGK KKVPVTCSGVSARQRRMSSKRKIQSKH FMAQPKISKQL+P ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: LSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
+SEE+L H+EVVRLSKKIKVGLALEE KT RLKERL C+PSEEQLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVM
Subjt: LSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVM
Query: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNM
Subjt: SIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNM
Query: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVN+LIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSR
Subjt: SKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Query: ERVRQVGLVALEKLKKAAKTRKMEAI
ERVRQVGLVALEKLKKAAK RKMEA+
Subjt: ERVRQVGLVALEKLKKAAKTRKMEAI
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| SwissProt top hits | e value | %identity | Alignment |
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| O24629 RNA polymerase sigma factor sigA | 1.9e-187 | 67.23 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TK+ I AK ++N+ PS+P SNRH+Q KALKE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTP-RGKI-LKKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P +G I KK+PV TCSG+SARQRR+ +K+K H +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTP-RGKI-LKKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K SRLK+RLGCEPS+EQLA+SLKISRAEL++ +MEC LAREKLA
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
Query: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
MSNVRLVMSIAQRYDN+GAEM+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+D
Subjt: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
RIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+I
Subjt: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
Query: SKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAI
SKRIGLSRERVRQVGLVALEKLK AA+ RKMEA+
Subjt: SKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAI
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| O33662 RNA polymerase sigma factor SigA | 7.9e-40 | 34.53 | Show/hide |
Query: ALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEP---SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQG
A+EE K +T SN+ +N + LKE +G P +EE+ +++ + +L A+++LA +N+RLV+SIA+RY G + DL+Q
Subjt: ALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEP---SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQG
Query: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSL
G +GL++ ++KFD SKGFK STY WWIRQ ++RA+ + +RT+R+P H+ E + L+R + LQE G P+ ++IAE ++M+ KV+ + + SL
Subjt: GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSL
Query: DREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKK
+ G ++H +I D +E NP T +L+ +++E+++ TL DRE ++RL GLD+ + T E++ K ++RER+RQ+ AL KL+
Subjt: DREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKK
Query: AAKTRKM
++++++
Subjt: AAKTRKM
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| P0A4I9 RNA polymerase sigma factor SigA | 2.5e-38 | 35.09 | Show/hide |
Query: SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
+EE+ ++L + ++ A+++LA +N+RLV+SIA+RY G + DL+Q G +GL++ ++KFD SKGFK STY WWIRQ ++RA+ + +RT
Subjt: SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
Query: LRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAE
+R+P H+ E + L+R + LQE G P+ ++IAE ++M+ KV+ + + SL+ G ++H +I D +E NP T +L+ +
Subjt: LRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAE
Query: VNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKM
++E+++ TL DRE ++RL GLD+ + T E++ K ++RER+RQ+ AL KL++ ++++ +
Subjt: VNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKM
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| P0A4J0 RNA polymerase sigma factor SigA | 2.5e-38 | 35.09 | Show/hide |
Query: SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
+EE+ ++L + ++ A+++LA +N+RLV+SIA+RY G + DL+Q G +GL++ ++KFD SKGFK STY WWIRQ ++RA+ + +RT
Subjt: SEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT
Query: LRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAE
+R+P H+ E + L+R + LQE G P+ ++IAE ++M+ KV+ + + SL+ G ++H +I D +E NP T +L+ +
Subjt: LRLPTHLHERLG-LIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDTWILKAE
Query: VNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKM
++E+++ TL DRE ++RL GLD+ + T E++ K ++RER+RQ+ AL KL++ ++++ +
Subjt: VNELINITLGDREREIIRLYHGLDN-ECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKM
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| Q0J7T6 RNA polymerase sigma factor sigA | 2.5e-126 | 48.74 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNR---------------HSQCIKALKEHVD-----
M AT A+IGL A RLL++S F L + LG + +F P P + + +Q ++AL+ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNR---------------HSQCIKALKEHVD-----
Query: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFEQ--------TVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMA
P P P + DL+ ++EA++LLQ+SMLEKQW L F+ D K V V S VSARQRRMS +R+ ++K+
Subjt: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFEQ--------TVSTDTPRGKILKKVPVTCSGVSARQRRMSSKRKIQSKHAFMA
Query: QPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKI
+SPEL+Q+R + Y++G +S+ELL+H +VV LS KIK G+ L++++ S+LKE+LG EPS +QLA SLKI
Subjt: QPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKI
Query: SRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL
S ELRSR+ E LARE L MSN+RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL
Subjt: SRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL
Query: GLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDRE
IR AK L+++GI P+++ IA SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVN+L+N TL +RE
Subjt: GLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDRE
Query: REIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAI
R+IIRLYHG+ +C TWE+IS++ GLSRERVRQVGL+A+EKLK AA+ + +EA+
Subjt: REIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 2.2e-37 | 31.75 | Show/hide |
Query: TDTPRGKILKKVPVTCSGVSARQRRMSSKRK-----IQSK-----HAFMAQPKISKQLRPTISPELLQNRLKGYVK---GLLSEELLSHAEVVRL-SKKI
T+ R IL + V+ +G+ + + S+ K ++S+ QP +S +R T E R KG K G+ S + S + RL ++++
Subjt: TDTPRGKILKKVPVTCSGVSARQRRMSSKRK-----IQSK-----HAFMAQPKISKQLRPTISPELLQNRLKGYVK---GLLSEELLSHAEVVRL-SKKI
Query: KVGLALEE-RKTSSITPLL----KHSSNNDIMNF----TLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNM
L R T+S + LL +H + I + L + L ER G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y
Subjt: KVGLALEE-RKTSSITPLL----KHSSNNDIMNF----TLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNM
Query: GAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNA
G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++
Subjt: GAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNA
Query: TEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNELINITLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRER
+ SLD++ + N P E IAD P T IL + +++++++ +LG RE+++IR G+ D T +EI + +G+SRER
Subjt: TEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNELINITLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRER
Query: VRQVGLVALEKLKKAAKTRKME
VRQ+ A KLK + ++
Subjt: VRQVGLVALEKLKKAAKTRKME
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| AT1G64860.1 sigma factor A | 1.4e-188 | 67.23 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TK+ I AK ++N+ PS+P SNRH+Q KALKE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTP-RGKI-LKKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P +G I KK+PV TCSG+SARQRR+ +K+K H +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTP-RGKI-LKKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K SRLK+RLGCEPS+EQLA+SLKISRAEL++ +MEC LAREKLA
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
Query: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
MSNVRLVMSIAQRYDN+GAEM+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+D
Subjt: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
RIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+I
Subjt: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
Query: SKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAI
SKRIGLSRERVRQVGLVALEKLK AA+ RKMEA+
Subjt: SKRIGLSRERVRQVGLVALEKLKKAAKTRKMEAI
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| AT1G64860.2 sigma factor A | 2.3e-175 | 66.07 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TK+ I AK ++N+ PS+P SNRH+Q KALKE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDHRLGQTQVSPTKNVIIAKSSANFFPSYPLSNRHSQCIKALKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTP-RGKI-LKKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P +G I KK+PV TCSG+SARQRR+ +K+K H +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDTP-RGKI-LKKVPV-TCSGVSARQRRMSSKRKIQSKHAFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K SRLK+RLGCEPS+EQLA+SLKISRAEL++ +MEC LAREKLA
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTSSITPLLKHSSNNDIMNFTLTSRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLA
Query: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
MSNVRLVMSIAQRYDN+GAEM+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+D
Subjt: MSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
RIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV++LI+ TLG+RE+EIIRLY+GLD ECLTWE+I
Subjt: RIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNELINITLGDREREIIRLYHGLDNECLTWEEI
Query: SKRI
SKRI
Subjt: SKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.9e-33 | 32.49 | Show/hide |
Query: SRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQG
++L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G DL+Q G +GL++ +EKF G + +TY YWWIRQ
Subjt: SRLKERLGCEPSEEQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQG
Query: VSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWH
+ +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+ S+ + + + T D+ +E P
Subjt: VSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWH
Query: GTDTWILKAEVNELINITLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEA
+++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL +LK+ + + A
Subjt: GTDTWILKAEVNELINITLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 1.1e-33 | 37.31 | Show/hide |
Query: ERLGCEPSE-EQLAISLKISRAELRSRVMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQ
E LG E E +++ L R + + E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q
Subjt: ERLGCEPSE-EQLAISLKISRAELRSRVMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQ
Query: GVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPW
+ RA+ SR ++LP + E + A L K PS + IAE LN++ V+ A E SLDR A + G I E P
Subjt: GVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPW
Query: HGTDTWILKAEVNELINITLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
+K E+ +L+ +L RE ++ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: HGTDTWILKAEVNELINITLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
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