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CaUC02G034430 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G034430
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionAbc transporter b family protein
Genome locationCiama_Chr02:11600609..11601032
RNA-Seq ExpressionCaUC02G034430
SyntenyCaUC02G034430
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR036640 - ABC transporter type 1, transmembrane domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652327.1 hypothetical protein Csa_022376 [Cucumis sativus]1.3e-2875.53Show/hide
Query:  MIHDQEKSQED----GSSIDGP-LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA
        MIH +EKSQED     SS DGP  PFHKLL YADALDWVLM LGTFGS+IHGMAQP+GYLLLGKALDAFGNNIDDIDAMVDALY+    ++ +A
Subjt:  MIHDQEKSQED----GSSIDGP-LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA

XP_022986167.1 ABC transporter B family member 19-like [Cucurbita maxima]2.5e-2977.65Show/hide
Query:  QEKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA
        +EK QED +SID PLPFHKLLGYADALDWVLMALGT GS++HGMAQP+GYLLLGKALDAFGNNIDD+DAMVDALY+    ++ +A
Subjt:  QEKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA

XP_023513249.1 LOW QUALITY PROTEIN: ABC transporter B family member 13-like [Cucurbita pepo subsp. pepo]3.7e-2884.21Show/hide
Query:  QEKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK
        +EK QED +SID  LPFHKLLGYADALDWVLMALGT GS++HGMAQP+GYLLLGKALDAFGNNIDD+DAMVDALY+
Subjt:  QEKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK

XP_031737070.1 ABC transporter B family member 19-like [Cucumis sativus]1.3e-2875.53Show/hide
Query:  MIHDQEKSQED----GSSIDGP-LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA
        MIH +EKSQED     SS DGP  PFHKLL YADALDWVLM LGTFGS+IHGMAQP+GYLLLGKALDAFGNNIDDIDAMVDALY+    ++ +A
Subjt:  MIHDQEKSQED----GSSIDGP-LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA

XP_038901079.1 LOW QUALITY PROTEIN: ABC transporter B family member 14-like [Benincasa hispida]3.8e-3383.72Show/hide
Query:  DQEKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA
        D+EKSQEDG SID P PFHKLLGY DALDWVLMALGTFGSIIHGMAQP+GYLLLGKALDAFGNNIDDIDAMVDALYK    ++ +A
Subjt:  DQEKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA

TrEMBL top hitse value%identityAlignment
A0A0A0LQN3 ABC transmembrane type-1 domain-containing protein5.9e-2467.9Show/hide
Query:  MIHDQEKSQEDGSSI-DGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK
        M ++++  +E+GS+  D  LPFHKLL Y D+LDWVLM LGTFGS++HGMAQP+GYLLLGKAL+AFGNNI D+DAMV ALY+
Subjt:  MIHDQEKSQEDGSSI-DGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK

A0A0A0LTG8 Uncharacterized protein1.0e-2882.35Show/hide
Query:  MIHDQEKSQED----GSSIDGP-LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK
        MIH +EKSQED     SS DGP  PFHKLL YADALDWVLM LGTFGS+IHGMAQP+GYLLLGKALDAFGNNIDDIDAMVDALY+
Subjt:  MIHDQEKSQED----GSSIDGP-LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK

A0A1S4E3X0 LOW QUALITY PROTEIN: ABC transporter B family member 19-like1.8e-2875Show/hide
Query:  MIHDQEKSQE---DGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA
        MIH +EKSQE     SSIDGP PFHKLL YADA DWVLM LGTFGS IHGMAQP+GYLLLGKALDAFGNNI DIDAMVDALY+    ++ +A
Subjt:  MIHDQEKSQE---DGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA

A0A5D3BP19 ABC transporter B family member 19-like3.0e-2881.93Show/hide
Query:  MIHDQEKSQE---DGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK
        MIH +EKSQE     SSIDGP PFHKLL YADA DWVLM LGTFGS IHGMAQP+GYLLLGKALDAFGNNI DIDAMVDALY+
Subjt:  MIHDQEKSQE---DGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK

A0A6J1J6U2 ABC transporter B family member 19-like1.2e-2977.65Show/hide
Query:  QEKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA
        +EK QED +SID PLPFHKLLGYADALDWVLMALGT GS++HGMAQP+GYLLLGKALDAFGNNIDD+DAMVDALY+    ++ +A
Subjt:  QEKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVA

SwissProt top hitse value%identityAlignment
O80725 ABC transporter B family member 41.3e-0753.06Show/hide
Query:  LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNN
        +PF+KL  +AD+ D++LM LGT GSI +G+  PL  LL G  +DAFG N
Subjt:  LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNN

Q9LJX0 ABC transporter B family member 192.6e-0843.86Show/hide
Query:  LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMV
        LPF KL  +AD  D++LM +G+ G+I+HG + P+ +LL G+ ++ FG N  D+  MV
Subjt:  LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMV

Q9M1Q9 ABC transporter B family member 217.5e-0837.31Show/hide
Query:  EKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDID
        EK++++       +PFHKL  +AD+ D +LM LGT G++ +G+  P+  +L G  +D FG N +  D
Subjt:  EKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDID

Q9SGY1 ABC transporter B family member 105.0e-0444.44Show/hide
Query:  FHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFG
        F KL  +AD  D VLMALG+ G+ IHG + P+ ++  GK ++  G
Subjt:  FHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFG

Q9ZR72 ABC transporter B family member 11.2e-0533.33Show/hide
Query:  FHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK
        F +L  +AD LD+VLM +G+ G+ +HG + PL        +++FG+N ++++ M++ + K
Subjt:  FHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK

Arabidopsis top hitse value%identityAlignment
AT1G10680.1 P-glycoprotein 103.6e-0544.44Show/hide
Query:  FHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFG
        F KL  +AD  D VLMALG+ G+ IHG + P+ ++  GK ++  G
Subjt:  FHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFG

AT2G36910.1 ATP binding cassette subfamily B18.5e-0733.33Show/hide
Query:  FHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK
        F +L  +AD LD+VLM +G+ G+ +HG + PL        +++FG+N ++++ M++ + K
Subjt:  FHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYK

AT2G47000.1 ATP binding cassette subfamily B49.1e-0953.06Show/hide
Query:  LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNN
        +PF+KL  +AD+ D++LM LGT GSI +G+  PL  LL G  +DAFG N
Subjt:  LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNN

AT3G28860.1 ATP binding cassette subfamily B191.8e-0943.86Show/hide
Query:  LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMV
        LPF KL  +AD  D++LM +G+ G+I+HG + P+ +LL G+ ++ FG N  D+  MV
Subjt:  LPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMV

AT3G62150.1 P-glycoprotein 215.3e-0937.31Show/hide
Query:  EKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDID
        EK++++       +PFHKL  +AD+ D +LM LGT G++ +G+  P+  +L G  +D FG N +  D
Subjt:  EKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCATGATCAAGAGAAGAGCCAAGAAGATGGCTCCTCCATTGATGGCCCTTTACCATTTCACAAGCTTCTTGGCTATGCTGATGCTTTGGATTGGGTTTTAATGGC
TTTGGGGACTTTTGGTTCTATTATCCATGGCATGGCTCAGCCACTTGGGTATCTCTTGCTTGGCAAAGCACTTGATGCATTTGGAAATAATATTGATGATATTGATGCAA
TGGTTGATGCCCTCTATAAGGGAACAACTTCCATCTATCAAGTGGCCACATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCATGATCAAGAGAAGAGCCAAGAAGATGGCTCCTCCATTGATGGCCCTTTACCATTTCACAAGCTTCTTGGCTATGCTGATGCTTTGGATTGGGTTTTAATGGC
TTTGGGGACTTTTGGTTCTATTATCCATGGCATGGCTCAGCCACTTGGGTATCTCTTGCTTGGCAAAGCACTTGATGCATTTGGAAATAATATTGATGATATTGATGCAA
TGGTTGATGCCCTCTATAAGGGAACAACTTCCATCTATCAAGTGGCCACATAG
Protein sequenceShow/hide protein sequence
MIHDQEKSQEDGSSIDGPLPFHKLLGYADALDWVLMALGTFGSIIHGMAQPLGYLLLGKALDAFGNNIDDIDAMVDALYKGTTSIYQVAT