; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G034560 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G034560
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr02:12178939..12179187
RNA-Seq ExpressionCaUC02G034560
SyntenyCaUC02G034560
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571236.1 hypothetical protein SDJN03_30151, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1566.67Show/hide
Query:  HLCLLSLLLLPLLLPA------HGRALRPDATAEIGQRDGSDAHEFKLKPKD-SSGGDDGGGGSNAESNQRVFTLASGPSRRGDGHK
        HLCLLSLLLLPLLLPA      H RAL+ +          SDAHEFKLKPKD   GG++GGGG    SNQRVFTLASGPSRRGDGHK
Subjt:  HLCLLSLLLLPLLLPA------HGRALRPDATAEIGQRDGSDAHEFKLKPKD-SSGGDDGGGGSNAESNQRVFTLASGPSRRGDGHK
KGN63303.1 hypothetical protein Csa_022628 [Cucumis sativus]1.2e-2274.16Show/hide
Query:  MRHLCLLSLLLLPLLLP-------AHGRALRPDATAEIGQRDGSDAHEFKLKPKDSSGGDDGGGGSNAESNQRVFTLASGPSRRGDGHK
        MRHLCLLSLLLLPLLLP        HGRAL+PDAT EI    GS AHEFKLKPKD  GG D GGG +  SNQRVFTLASGPSRRGDGHK
Subjt:  MRHLCLLSLLLLPLLLP-------AHGRALRPDATAEIGQRDGSDAHEFKLKPKDSSGGDDGGGGSNAESNQRVFTLASGPSRRGDGHK
TrEMBL top hitse value%identityAlignment
A0A0A0LNA9 Uncharacterized protein6.0e-2374.16Show/hide
Query:  MRHLCLLSLLLLPLLLP-------AHGRALRPDATAEIGQRDGSDAHEFKLKPKDSSGGDDGGGGSNAESNQRVFTLASGPSRRGDGHK
        MRHLCLLSLLLLPLLLP        HGRAL+PDAT EI    GS AHEFKLKPKD  GG D GGG +  SNQRVFTLASGPSRRGDGHK
Subjt:  MRHLCLLSLLLLPLLLP-------AHGRALRPDATAEIGQRDGSDAHEFKLKPKDSSGGDDGGGGSNAESNQRVFTLASGPSRRGDGHK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCATCTTTGCCTCCTCTCTCTGCTCCTCTTGCCCTTGCTTCTTCCCGCCCACGGGAGAGCACTCCGGCCCGACGCCACAGCCGAGATCGGGCAGCGGGATGGGTC
CGATGCCCATGAATTCAAATTGAAACCAAAGGATAGTAGTGGTGGTGATGATGGTGGTGGTGGTTCCAACGCTGAGTCGAATCAGCGAGTGTTTACGTTGGCGTCAGGAC
CCAGCAGGAGGGGAGATGGGCACAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCATCTTTGCCTCCTCTCTCTGCTCCTCTTGCCCTTGCTTCTTCCCGCCCACGGGAGAGCACTCCGGCCCGACGCCACAGCCGAGATCGGGCAGCGGGATGGGTC
CGATGCCCATGAATTCAAATTGAAACCAAAGGATAGTAGTGGTGGTGATGATGGTGGTGGTGGTTCCAACGCTGAGTCGAATCAGCGAGTGTTTACGTTGGCGTCAGGAC
CCAGCAGGAGGGGAGATGGGCACAAGTGA
Protein sequenceShow/hide protein sequence
MRHLCLLSLLLLPLLLPAHGRALRPDATAEIGQRDGSDAHEFKLKPKDSSGGDDGGGGSNAESNQRVFTLASGPSRRGDGHK