; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G035260 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G035260
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCiama_Chr02:14422701..14425240
RNA-Seq ExpressionCaUC02G035260
SyntenyCaUC02G035260
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063642.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.6e-15390.88Show/hide
Query:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV
        SSIHSISPSQTLQ++I+AAVESKSY+KLP LFPSLQEACHNPNLFLFLSTFP NLRTQVVDEILQSLI +RPRS+SQFVH SLLFYTLQSPSPFPLSLPV
Subjt:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV

Query:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT
        LQRILHSGCVP+PQTH LLSSAWLKQRSQ+KSVANILMDM+SIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGAGCVPDLESYGTLI AATA+RRT
Subjt:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT

Query:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL
        DKAVELLKEMVVKVKL PRQ TIINVVAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REYILAGKV M MT+RGFIPYIKVRQKVVEGL
Subjt:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL

Query:  AGIGEPELASAVRRRFVE
         GIGE ELASAVRRRFVE
Subjt:  AGIGEPELASAVRRRFVE

XP_004139374.1 pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativus]3.5e-15690.94Show/hide
Query:  RYSSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL
        +YSSIHSISPSQTLQ++I+AAVESKSY+KLPDLFPSLQEACHNPNLFLFLSTFP NLRTQVVDEILQSLISIRPRS+SQFVH SLLFYTLQSPSPFPLSL
Subjt:  RYSSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL

Query:  PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALR
        PVLQRILHSGCVP+PQTH LLSSAWLKQRSQ+KSVANILMDM+SIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGAGC+PDLESYGTLI AATA+R
Subjt:  PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALR

Query:  RTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVE
        RTDKAVELLKEMVVKVKL PRQGTI NVVAALR NREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REYILAGKV M MT+RGFIPYIKVRQ+VVE
Subjt:  RTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVE

Query:  GLAGIGEPELASAVRRRFVE
        GLAGIGE ELASAVRRRFVE
Subjt:  GLAGIGEPELASAVRRRFVE

XP_008455557.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo]6.2e-15390.57Show/hide
Query:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV
        SSIHSISPSQTLQ++I+AAVESKSY+KLP LFPSLQEACHNPNLFLFLSTFP NLRTQVVDEILQSLI +RPRS+SQFVH SLLFYTLQSPSPFPLSLPV
Subjt:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV

Query:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT
        LQRILHSGCVP+PQTH LLSSAWLKQRS +KSVANILMDM+SIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGAGCVPDLESYGTLI AATA+RRT
Subjt:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT

Query:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL
        DKAVELLKEMVVKVKL PRQ TIINVVAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REYILAGKV M MT+RGFIPYIKVRQKVVEGL
Subjt:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL

Query:  AGIGEPELASAVRRRFVE
         GIGE ELASAVRRRFVE
Subjt:  AGIGEPELASAVRRRFVE

XP_022971046.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima]6.0e-14886.25Show/hide
Query:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV
        SS+ SI+P+QTLQE+I+AAVESKSY+KLPDLFPSLQEAC NPN F FLSTFP N RTQVVDEILQSLI +RPRSR QFVH SLLFYTLQSPSP PLSLPV
Subjt:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV

Query:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT
        LQRILHSGC P PQTHLLLSSAWLKQR QSKSVA+IL+DMRSIGY+PDS+ICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLIS++TA+RRT
Subjt:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT

Query:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL
         +AVELLKEMVVKVKLTPR+GT+INVVAALRANRE+RRAVEIIELLEKES+NVGFESYE+LVEGCLE REYILAGKV M MTE+G+IPYI+VR KVVEGL
Subjt:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL

Query:  AGIGEPELASAVRRRFVEFR
        AGIGE ELASAVRRRF E R
Subjt:  AGIGEPELASAVRRRFVEFR

XP_038902935.1 pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida]9.2e-15792.16Show/hide
Query:  RYSSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL
        +YSSIHSISPSQ LQE+I+AAVESKSY+KLPDLFPSL+EACHNPNLFLFLSTFP N+RTQ+VDEILQSLISIRPRSRSQFVHVSLLFYTLQ  SPFPLSL
Subjt:  RYSSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL

Query:  PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALR
        PVLQRILHSG VPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNY+ISSLCA DELAEAFQVLKGMGGAGC PDLESYGTLISA TA+R
Subjt:  PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALR

Query:  RTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVE
        +TDKAVELLKEMV+KVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLE REYILAGKV M MTERGFIPYIKVRQKVVE
Subjt:  RTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVE

Query:  GLAGIGEPELASAVRRRFV
        GLAGIGE E ASAVRR+FV
Subjt:  GLAGIGEPELASAVRRRFV

TrEMBL top hitse value%identityAlignment
A0A0A0LFL3 Uncharacterized protein1.7e-15690.94Show/hide
Query:  RYSSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL
        +YSSIHSISPSQTLQ++I+AAVESKSY+KLPDLFPSLQEACHNPNLFLFLSTFP NLRTQVVDEILQSLISIRPRS+SQFVH SLLFYTLQSPSPFPLSL
Subjt:  RYSSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSL

Query:  PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALR
        PVLQRILHSGCVP+PQTH LLSSAWLKQRSQ+KSVANILMDM+SIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGAGC+PDLESYGTLI AATA+R
Subjt:  PVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALR

Query:  RTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVE
        RTDKAVELLKEMVVKVKL PRQGTI NVVAALR NREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REYILAGKV M MT+RGFIPYIKVRQ+VVE
Subjt:  RTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVE

Query:  GLAGIGEPELASAVRRRFVE
        GLAGIGE ELASAVRRRFVE
Subjt:  GLAGIGEPELASAVRRRFVE

A0A1S3C1B6 pentatricopeptide repeat-containing protein At1g062703.0e-15390.57Show/hide
Query:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV
        SSIHSISPSQTLQ++I+AAVESKSY+KLP LFPSLQEACHNPNLFLFLSTFP NLRTQVVDEILQSLI +RPRS+SQFVH SLLFYTLQSPSPFPLSLPV
Subjt:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV

Query:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT
        LQRILHSGCVP+PQTH LLSSAWLKQRS +KSVANILMDM+SIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGAGCVPDLESYGTLI AATA+RRT
Subjt:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT

Query:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL
        DKAVELLKEMVVKVKL PRQ TIINVVAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REYILAGKV M MT+RGFIPYIKVRQKVVEGL
Subjt:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL

Query:  AGIGEPELASAVRRRFVE
         GIGE ELASAVRRRFVE
Subjt:  AGIGEPELASAVRRRFVE

A0A5D3D4C7 Pentatricopeptide repeat-containing protein7.9e-15490.88Show/hide
Query:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV
        SSIHSISPSQTLQ++I+AAVESKSY+KLP LFPSLQEACHNPNLFLFLSTFP NLRTQVVDEILQSLI +RPRS+SQFVH SLLFYTLQSPSPFPLSLPV
Subjt:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV

Query:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT
        LQRILHSGCVP+PQTH LLSSAWLKQRSQ+KSVANILMDM+SIGYKPDSNICNYLISSLC+I ELAEAFQVLKGMGGAGCVPDLESYGTLI AATA+RRT
Subjt:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT

Query:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL
        DKAVELLKEMVVKVKL PRQ TIINVVAALRANREVRRAVEIIELLE++SH+VGFESYELLVEGCLE REYILAGKV M MT+RGFIPYIKVRQKVVEGL
Subjt:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL

Query:  AGIGEPELASAVRRRFVE
         GIGE ELASAVRRRFVE
Subjt:  AGIGEPELASAVRRRFVE

A0A6J1G5M7 pentatricopeptide repeat-containing protein At1g062703.2e-14785.62Show/hide
Query:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV
        SS+ SI+P+Q+LQE+I AAVESKSY+KLPDLFPSLQEAC NPN F FLSTFP N RT VVDEILQSLI +RPRSR QFVH SLLFYTLQSPSP PLSLPV
Subjt:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV

Query:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT
        LQRILHSGCVP PQTHLLLSS WLKQR QSKSVA+IL++MRSIGY+PDS+ICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLIS++TA+RRT
Subjt:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT

Query:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL
         +AVELLKEMVVKVKLTPRQGT+INVVAALRANRE+RRAVEIIELLEKES+NVGFESYE+LVEGCLE REYILAGKV M MTE+G+IPYI+VR KVVEGL
Subjt:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL

Query:  AGIGEPELASAVRRRFVEFR
        AGIGE ELASAVRRRF E R
Subjt:  AGIGEPELASAVRRRFVEFR

A0A6J1I5P5 pentatricopeptide repeat-containing protein At1g062702.9e-14886.25Show/hide
Query:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV
        SS+ SI+P+QTLQE+I+AAVESKSY+KLPDLFPSLQEAC NPN F FLSTFP N RTQVVDEILQSLI +RPRSR QFVH SLLFYTLQSPSP PLSLPV
Subjt:  SSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPV

Query:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT
        LQRILHSGC P PQTHLLLSSAWLKQR QSKSVA+IL+DMRSIGY+PDS+ICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLIS++TA+RRT
Subjt:  LQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRT

Query:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL
         +AVELLKEMVVKVKLTPR+GT+INVVAALRANRE+RRAVEIIELLEKES+NVGFESYE+LVEGCLE REYILAGKV M MTE+G+IPYI+VR KVVEGL
Subjt:  DKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGL

Query:  AGIGEPELASAVRRRFVEFR
        AGIGE ELASAVRRRF E R
Subjt:  AGIGEPELASAVRRRFVEFR

SwissProt top hitse value%identityAlignment
Q3EDF8 Pentatricopeptide repeat-containing protein At1g099001.9e-0824.88Show/hide
Query:  SLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA
        ++ +L+++   GC P   ++  L   + K++   +++   L  M S G  PD    N ++++LC   ++ +A ++L  +   GC P L +Y T+I     
Subjt:  SLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA

Query:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKV
          +T KA++LL EM  K  L P   T  ++V  L    +V  A++     E+        ++  ++ G  + R+   A    + M  RG  P       +
Subjt:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKV

Query:  VEGLA
        +EGLA
Subjt:  VEGLA

Q9FMF6 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial6.7e-0925Show/hide
Query:  LSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAAT
        L+L VL  + + GC P   ++ +L   + K   +     N+L +M + G KP++   N LIS+ C    + EA ++ + M   GC PD+ ++ +LIS   
Subjt:  LSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAAT

Query:  ALRRTDKAVELLKEMVVK--VKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVR
         +     A+ LL++M+ +  V  T    T+IN   A     E++ A +++  +  +   +   +Y  L++G     E   A  +  +M   G  P     
Subjt:  ALRRTDKAVELLKEMVVK--VKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVR

Query:  QKVVEGLAGIGEPELASAVRRRFV
          ++ GL   G  E A   ++  V
Subjt:  QKVVEGLAGIGEPELASAVRRRFV

Q9LFF1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic1.9e-0827.04Show/hide
Query:  KSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVK-VKLTPRQGTIINVVAA
        +  A ++  M   G KPD    N L++  C   ++ +A  +++ M   GC PD+ +YGTLIS      R + A +LL+ + +K + LTP       V+  
Subjt:  KSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVK-VKLTPRQGTIINVVAA

Query:  LRANREVRRAVEII-ELLEKESHNVGFESYELLVEG-CLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG-EPELASAVRRRFVEFRFN
        L   R+   A+ +  E+LE+        SY ++  G C        A    + + E+GF+P       + EGL  +  E  L   V     + RF+
Subjt:  LRANREVRRAVEII-ELLEKESHNVGFESYELLVEG-CLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG-EPELASAVRRRFVEFRFN

Q9LNC0 Pentatricopeptide repeat-containing protein At1g062702.6e-9356.01Show/hide
Query:  SISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPVLQRI
        SIS  + +++ I+ AVE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEILQS + +RPRS  + V+ SLL Y LQS  P PLS  +LQR 
Subjt:  SISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPVLQRI

Query:  LHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAV
        L SGC+P PQTHLLLS AWL++R  S+SVA+I+ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+PD+ESYG +I++    R+T   V
Subjt:  LHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAV

Query:  ELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG
        +++KEMV K  ++PR+G +  V AALRANRE+ +A+E+IE +E   + V FESYE++VEGCLE REYILAGKV MRMT+RGFIPYIKVRQKVVE L  IG
Subjt:  ELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG

Query:  EPELASAVRRRFVEFR
        E +LA  VR+R  E R
Subjt:  EPELASAVRRRFVEFR

Q9SZ52 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic1.8e-0925.49Show/hide
Query:  SLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA
        ++ V +R++  G  P+ QT+  L    L +R    SV  +L +M ++G KP+       I  L    ++ EA+++LK M   GC PD+ +Y  LI A   
Subjt:  SLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA

Query:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKV
         R+ D A E+ ++M    +  P + T I ++     NR++    +    +EK+ H     ++ +LV+   +   +  A      M ++G +P +     +
Subjt:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKV

Query:  VEGL
        + GL
Subjt:  VEGL

Arabidopsis top hitse value%identityAlignment
AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein1.8e-9456.01Show/hide
Query:  SISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPVLQRI
        SIS  + +++ I+ AVE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEILQS + +RPRS  + V+ SLL Y LQS  P PLS  +LQR 
Subjt:  SISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQVVDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPVLQRI

Query:  LHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAV
        L SGC+P PQTHLLLS AWL++R  S+SVA+I+ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+PD+ESYG +I++    R+T   V
Subjt:  LHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAV

Query:  ELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG
        +++KEMV K  ++PR+G +  V AALRANRE+ +A+E+IE +E   + V FESYE++VEGCLE REYILAGKV MRMT+RGFIPYIKVRQKVVE L  IG
Subjt:  ELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG

Query:  EPELASAVRRRFVEFR
        E +LA  VR+R  E R
Subjt:  EPELASAVRRRFVEFR

AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.4e-0924.88Show/hide
Query:  SLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA
        ++ +L+++   GC P   ++  L   + K++   +++   L  M S G  PD    N ++++LC   ++ +A ++L  +   GC P L +Y T+I     
Subjt:  SLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA

Query:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKV
          +T KA++LL EM  K  L P   T  ++V  L    +V  A++     E+        ++  ++ G  + R+   A    + M  RG  P       +
Subjt:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKV

Query:  VEGLA
        +EGLA
Subjt:  VEGLA

AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-0927.04Show/hide
Query:  KSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVK-VKLTPRQGTIINVVAA
        +  A ++  M   G KPD    N L++  C   ++ +A  +++ M   GC PD+ +YGTLIS      R + A +LL+ + +K + LTP       V+  
Subjt:  KSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVK-VKLTPRQGTIINVVAA

Query:  LRANREVRRAVEII-ELLEKESHNVGFESYELLVEG-CLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG-EPELASAVRRRFVEFRFN
        L   R+   A+ +  E+LE+        SY ++  G C        A    + + E+GF+P       + EGL  +  E  L   V     + RF+
Subjt:  LRANREVRRAVEII-ELLEKESHNVGFESYELLVEG-CLEYREYILAGKVAMRMTERGFIPYIKVRQKVVEGLAGIG-EPELASAVRRRFVEFRFN

AT4G31850.1 proton gradient regulation 31.3e-1025.49Show/hide
Query:  SLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA
        ++ V +R++  G  P+ QT+  L    L +R    SV  +L +M ++G KP+       I  L    ++ EA+++LK M   GC PD+ +Y  LI A   
Subjt:  SLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAATA

Query:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKV
         R+ D A E+ ++M    +  P + T I ++     NR++    +    +EK+ H     ++ +LV+   +   +  A      M ++G +P +     +
Subjt:  LRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVRQKV

Query:  VEGL
        + GL
Subjt:  VEGL

AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein4.8e-1025Show/hide
Query:  LSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAAT
        L+L VL  + + GC P   ++ +L   + K   +     N+L +M + G KP++   N LIS+ C    + EA ++ + M   GC PD+ ++ +LIS   
Subjt:  LSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISAAT

Query:  ALRRTDKAVELLKEMVVK--VKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVR
         +     A+ LL++M+ +  V  T    T+IN   A     E++ A +++  +  +   +   +Y  L++G     E   A  +  +M   G  P     
Subjt:  ALRRTDKAVELLKEMVVK--VKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYREYILAGKVAMRMTERGFIPYIKVR

Query:  QKVVEGLAGIGEPELASAVRRRFV
          ++ GL   G  E A   ++  V
Subjt:  QKVVEGLAGIGEPELASAVRRRFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAATGAAAATATAAATTTGGTTTCTAGAGCATTAAAAAAGAAAACTCATTTTTGTAATGTTTTTGGAAAGAGTTTGATTCAGTGGCAGCCGACGCACGCT
GCAGTCGCCGCCGCTCCCTCCGCCTCTAGATATTCTTCTATCCACTCAATATCTCCATCACAAACCCTTCAAGAGAACATTGAAGCTGCAGTTGAATCAAAGTCG
TATGAGAAACTTCCAGATTTGTTTCCTTCTTTGCAAGAAGCTTGCCATAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTGCTAACTTAAGAACACAAGTT
GTGGATGAGATATTGCAATCTTTAATATCTATTAGACCTCGTTCAAGATCCCAGTTTGTCCATGTCTCTCTGCTTTTCTACACTCTTCAAAGCCCTTCACCGTTT
CCCCTCTCTCTTCCAGTCCTTCAGAGGATTCTTCACTCTGGTTGTGTCCCTGCCCCTCAGACCCACCTTCTCCTCTCTTCTGCCTGGCTAAAACAACGTAGCCAG
TCTAAGTCTGTTGCTAATATCTTGATGGATATGCGGTCAATTGGCTACAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTGCCATTGATGAA
TTAGCAGAGGCTTTTCAAGTCTTGAAAGGTATGGGAGGGGCAGGATGTGTTCCTGACTTGGAGAGTTATGGGACCTTGATTAGTGCAGCAACAGCTCTTAGGCGG
ACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAACGTTGTGGCTGCTTTACGAGCAAACCGA
GAGGTAAGGAGAGCAGTTGAGATCATTGAGCTGTTGGAGAAGGAGAGTCACAATGTTGGATTTGAGAGCTATGAGCTTCTCGTTGAAGGTTGTCTAGAGTATCGC
GAGTATATTTTAGCGGGAAAGGTGGCCATGAGGATGACAGAGAGAGGGTTTATACCATATATCAAGGTCAGGCAAAAGGTTGTTGAGGGGCTGGCTGGCATTGGA
GAACCGGAACTTGCTTCTGCTGTAAGGCGCAGATTTGTAGAGTTCAGATTCAATTCCCCTGTATGGATATTCTATTTCTGTAGTGAGTCCAGTTTTCTTGATGAA
CTCAAATGCTTTGTACATGTAACCACCATTGCATCCCTGGTTCCCCGACGCCACATCGCAGTCCACAAGCTCCTAGACATCAATTTGCCTGTTTTAATTTTGTTG
ATGCCTTCCACTGCTGCTACTGCAGAGAATGCCCAGCAGCTCCCTGTGTCAAAAAATCAAAAC
mRNA sequenceShow/hide mRNA sequence
ATGAGTAATGAAAATATAAATTTGGTTTCTAGAGCATTAAAAAAGAAAACTCATTTTTGTAATGTTTTTGGAAAGAGTTTGATTCAGTGGCAGCCGACGCACGCT
GCAGTCGCCGCCGCTCCCTCCGCCTCTAGATATTCTTCTATCCACTCAATATCTCCATCACAAACCCTTCAAGAGAACATTGAAGCTGCAGTTGAATCAAAGTCG
TATGAGAAACTTCCAGATTTGTTTCCTTCTTTGCAAGAAGCTTGCCATAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTGCTAACTTAAGAACACAAGTT
GTGGATGAGATATTGCAATCTTTAATATCTATTAGACCTCGTTCAAGATCCCAGTTTGTCCATGTCTCTCTGCTTTTCTACACTCTTCAAAGCCCTTCACCGTTT
CCCCTCTCTCTTCCAGTCCTTCAGAGGATTCTTCACTCTGGTTGTGTCCCTGCCCCTCAGACCCACCTTCTCCTCTCTTCTGCCTGGCTAAAACAACGTAGCCAG
TCTAAGTCTGTTGCTAATATCTTGATGGATATGCGGTCAATTGGCTACAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTTTGTGCCATTGATGAA
TTAGCAGAGGCTTTTCAAGTCTTGAAAGGTATGGGAGGGGCAGGATGTGTTCCTGACTTGGAGAGTTATGGGACCTTGATTAGTGCAGCAACAGCTCTTAGGCGG
ACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAACGTTGTGGCTGCTTTACGAGCAAACCGA
GAGGTAAGGAGAGCAGTTGAGATCATTGAGCTGTTGGAGAAGGAGAGTCACAATGTTGGATTTGAGAGCTATGAGCTTCTCGTTGAAGGTTGTCTAGAGTATCGC
GAGTATATTTTAGCGGGAAAGGTGGCCATGAGGATGACAGAGAGAGGGTTTATACCATATATCAAGGTCAGGCAAAAGGTTGTTGAGGGGCTGGCTGGCATTGGA
GAACCGGAACTTGCTTCTGCTGTAAGGCGCAGATTTGTAGAGTTCAGATTCAATTCCCCTGTATGGATATTCTATTTCTGTAGTGAGTCCAGTTTTCTTGATGAA
CTCAAATGCTTTGTACATGTAACCACCATTGCATCCCTGGTTCCCCGACGCCACATCGCAGTCCACAAGCTCCTAGACATCAATTTGCCTGTTTTAATTTTGTTG
ATGCCTTCCACTGCTGCTACTGCAGAGAATGCCCAGCAGCTCCCTGTGTCAAAAAATCAAAAC
Protein sequenceShow/hide protein sequence
MSNENINLVSRALKKKTHFCNVFGKSLIQWQPTHAAVAAAPSASRYSSIHSISPSQTLQENIEAAVESKSYEKLPDLFPSLQEACHNPNLFLFLSTFPANLRTQV
VDEILQSLISIRPRSRSQFVHVSLLFYTLQSPSPFPLSLPVLQRILHSGCVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYLISSLCAIDE
LAEAFQVLKGMGGAGCVPDLESYGTLISAATALRRTDKAVELLKEMVVKVKLTPRQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLEYR
EYILAGKVAMRMTERGFIPYIKVRQKVVEGLAGIGEPELASAVRRRFVEFRFNSPVWIFYFCSESSFLDELKCFVHVTTIASLVPRRHIAVHKLLDINLPVLILL
MPSTAATAENAQQLPVSKNQN