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CaUC02G036750 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G036750
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionTransmembrane protein
Genome locationCiama_Chr02:22067010..22067519
RNA-Seq ExpressionCaUC02G036750
SyntenyCaUC02G036750
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3434655.1 hypothetical protein FNV43_RR21740 [Rhamnella rubrinervis]1.4e-3364.29Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSY-SIGGLINFRFRRPATGST
        M+WF PKRRGPEWKQGWTGQTL S+S+PP   LTIFGIVIVLLWFSQ+ TGY+AQ+ +   NFQL L +LPIL+IFFM+ Y S GG  NF+ RRP     
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSY-SIGGLINFRFRRPATGST

Query:  QRGASPWTIAILVPLILILLYYQPSF
        + G SPW +AIL+ L+L+LL YQ SF
Subjt:  QRGASPWTIAILVPLILILLYYQPSF

KAG7010871.1 hypothetical protein SDJN02_27669, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-4376.19Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTL-GSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGST
        M+W +PKRRGPEWKQ WTGQTL GSVSSPPPQ LTIFGIVIVLLWFSQ  TGY+ QM++   NFQL+LFLLPILVIFFMSSYS+ GLIN R  R ATGS 
Subjt:  MDWFQPKRRGPEWKQGWTGQTL-GSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGST

Query:  QRGASPWTIAILVPLILILLYYQPSF
        +RGASP TI ILV LIL+LLY++PSF
Subjt:  QRGASPWTIAILVPLILILLYYQPSF

KGN61894.1 hypothetical protein Csa_005908 [Cucumis sativus]2.4e-4175.81Show/hide
Query:  MDWFQPKRRGPEWKQG--WTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQR
        MD F PKRRGPEWK+G   TGQTL SVS PP Q L IFGIVIVLLWFSQFN G+EAQ+N++FQL LFLLPI VIFFM SYS   LINF FRR  TG  QR
Subjt:  MDWFQPKRRGPEWKQG--WTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQR

Query:  GASPWTIAILVPLILILLYYQPSF
        GASPWTIAILV LIL+LLYYQ SF
Subjt:  GASPWTIAILVPLILILLYYQPSF

PON83413.1 Transmembrane protein [Trema orientale]4.6e-3258.27Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQ
        M+WF PKRRGP+WKQGWT QT+ S+S+P    L IF IV+VLLW SQ+ TGY+AQ+ +   NFQL +FLLP+L+I FM+SYS  GL NFRFRRP   +  
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQ

Query:  R--GASPWTIAILVPLILILLYYQPSF
        +  G+SPW +A  V L+L+LL YQ SF
Subjt:  R--GASPWTIAILVPLILILLYYQPSF

RQO95857.1 hypothetical protein POPTR_009G129301 [Populus trichocarpa]2.1e-3255.56Show/hide
Query:  VEFSSERKEEVKKRKREMDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSI
        +EF  +R+E+ KK++ EM+WF PKRRGPEWKQGWTGQT+GSVSSPP   L IFGIVI LLW S + TGY+AQ++    N Q+ L LLPIL+I FM+SYS 
Subjt:  VEFSSERKEEVKKRKREMDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSI

Query:  GGLINFRFRRPATGSTQR--GASPWTIAILVPLILILLYYQPSF
          L+ +R R     S  R  G+ PW IAI V ++L+LL Y+ +F
Subjt:  GGLINFRFRRPATGSTQR--GASPWTIAILVPLILILLYYQPSF

TrEMBL top hitse value%identityAlignment
A0A0A0LLH8 Uncharacterized protein1.2e-4175.81Show/hide
Query:  MDWFQPKRRGPEWKQG--WTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQR
        MD F PKRRGPEWK+G   TGQTL SVS PP Q L IFGIVIVLLWFSQFN G+EAQ+N++FQL LFLLPI VIFFM SYS   LINF FRR  TG  QR
Subjt:  MDWFQPKRRGPEWKQG--WTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQR

Query:  GASPWTIAILVPLILILLYYQPSF
        GASPWTIAILV LIL+LLYYQ SF
Subjt:  GASPWTIAILVPLILILLYYQPSF

A0A2P5C233 Transmembrane protein1.9e-3159.06Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPA--TGS
        M WF PKRRGP+WKQGWT QT+ SVS+P    L IF IV+VLLW SQ+ TG++AQ+ +   NFQL +FLLP+L+I FM+SYS  GL NFRFRRP   T  
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPA--TGS

Query:  TQRGASPWTIAILVPLILILLYYQPSF
           G+SPW +A+ V L+L+LL YQ SF
Subjt:  TQRGASPWTIAILVPLILILLYYQPSF

A0A2P5ED06 Transmembrane protein2.2e-3258.27Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQ
        M+WF PKRRGP+WKQGWT QT+ S+S+P    L IF IV+VLLW SQ+ TGY+AQ+ +   NFQL +FLLP+L+I FM+SYS  GL NFRFRRP   +  
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQ

Query:  R--GASPWTIAILVPLILILLYYQPSF
        +  G+SPW +A  V L+L+LL YQ SF
Subjt:  R--GASPWTIAILVPLILILLYYQPSF

A0A3N7FJ08 Uncharacterized protein1.0e-3255.56Show/hide
Query:  VEFSSERKEEVKKRKREMDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSI
        +EF  +R+E+ KK++ EM+WF PKRRGPEWKQGWTGQT+GSVSSPP   L IFGIVI LLW S + TGY+AQ++    N Q+ L LLPIL+I FM+SYS 
Subjt:  VEFSSERKEEVKKRKREMDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNK---NFQLVLFLLPILVIFFMSSYSI

Query:  GGLINFRFRRPATGSTQR--GASPWTIAILVPLILILLYYQPSF
          L+ +R R     S  R  G+ PW IAI V ++L+LL Y+ +F
Subjt:  GGLINFRFRRPATGSTQR--GASPWTIAILVPLILILLYYQPSF

A0A5N6QRB9 Uncharacterized protein4.2e-3161.11Show/hide
Query:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQM---NKNFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQ
        M+WF  KRRGPEWKQGWTGQTLGS+S+PP   LTIFGIVIVLLW SQ +T Y+AQ+     NFQL +FLLPIL+I FM++YS GG  +    R    S Q
Subjt:  MDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQM---NKNFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQ

Query:  R-GASPWTIAILVPLILILLYYQPSF
        R G  PW +AILV ++L+LL YQ SF
Subjt:  R-GASPWTIAILVPLILILLYYQPSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19875.1 unknown protein1.9e-0430.19Show/hide
Query:  LGSVSSPPPQFLTIFGIVIVLL---WFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQR-GASPWTIAILVPLILILLY
        L  +S P P    +F +V  +L   W+  F +  E  ++ + +LV    P+ ++  +  +S GGL +F    P   S  R G+SPW +A ++ LIL ++ 
Subjt:  LGSVSSPPPQFLTIFGIVIVLL---WFSQFNTGYEAQMNKNFQLVLFLLPILVIFFMSSYSIGGLINFRFRRPATGSTQR-GASPWTIAILVPLILILLY

Query:  YQPSFR
        YQ  F+
Subjt:  YQPSFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTTGGCTGAGGCAACACTCAAAGAATATATCCCAAAACCAACACAACCCAATATACTCTCCCTCTATGTATTTCATGGCAATGTAGAATTTTCAAGTGAGAGAAA
GGAAGAGGTGAAGAAGAGAAAGAGAGAGATGGATTGGTTTCAACCAAAGAGAAGAGGTCCAGAGTGGAAACAAGGATGGACAGGCCAAACCCTAGGCTCTGTTTCTTCTC
CACCACCTCAATTTCTCACCATTTTTGGTATTGTCATTGTCTTGCTTTGGTTTTCTCAGTTCAACACAGGCTATGAAGCTCAAATGAACAAAAATTTTCAGCTGGTTCTT
TTCTTGTTGCCCATCTTGGTCATTTTCTTCATGTCTTCATATTCGATTGGTGGACTGATCAACTTCCGATTTCGCCGACCGGCAACCGGGTCAACTCAACGAGGTGCCTC
TCCATGGACCATTGCCATTTTGGTCCCTCTCATTCTGATTTTGCTTTATTACCAACCCTCATTCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCTTGGCTGAGGCAACACTCAAAGAATATATCCCAAAACCAACACAACCCAATATACTCTCCCTCTATGTATTTCATGGCAATGTAGAATTTTCAAGTGAGAGAAA
GGAAGAGGTGAAGAAGAGAAAGAGAGAGATGGATTGGTTTCAACCAAAGAGAAGAGGTCCAGAGTGGAAACAAGGATGGACAGGCCAAACCCTAGGCTCTGTTTCTTCTC
CACCACCTCAATTTCTCACCATTTTTGGTATTGTCATTGTCTTGCTTTGGTTTTCTCAGTTCAACACAGGCTATGAAGCTCAAATGAACAAAAATTTTCAGCTGGTTCTT
TTCTTGTTGCCCATCTTGGTCATTTTCTTCATGTCTTCATATTCGATTGGTGGACTGATCAACTTCCGATTTCGCCGACCGGCAACCGGGTCAACTCAACGAGGTGCCTC
TCCATGGACCATTGCCATTTTGGTCCCTCTCATTCTGATTTTGCTTTATTACCAACCCTCATTCCGTTGA
Protein sequenceShow/hide protein sequence
MTLAEATLKEYIPKPTQPNILSLYVFHGNVEFSSERKEEVKKRKREMDWFQPKRRGPEWKQGWTGQTLGSVSSPPPQFLTIFGIVIVLLWFSQFNTGYEAQMNKNFQLVL
FLLPILVIFFMSSYSIGGLINFRFRRPATGSTQRGASPWTIAILVPLILILLYYQPSFR