; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G037190 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G037190
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationCiama_Chr02:23067927..23068847
RNA-Seq ExpressionCaUC02G037190
SyntenyCaUC02G037190
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045730.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]6.0e-11569.38Show/hide
Query:  MGRRNRAPPRR-EKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFS
        MG RN+   RR +KP IRQVWASNF+SEI++FD+CL+FH+IL+IDTEFPGFI +SP  S +EEIY++FRFNVNQ KLIQLGITAS++ GQIGG+WEFNFS
Subjt:  MGRRNRAPPRR-EKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFS

Query:  DFDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMS
        DFD Q D+H PS++ FLE NG+DF+KLKK GIPI  FT  FL II+K ++FRWVTFHGLYDIGYLIKAMGLI VLP+SMEEFAT+VV  VGIVRDLKHM+
Subjt:  DFDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMS

Query:  RFCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYT
        RFCEGLEDG+LGLERLG++LN+KR+G KHNAGSDSLLTAS+H EM++RFGM   +C+GFLYGFS  LES    MKM +YHH  ++R  QIP     + YT
Subjt:  RFCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYT

Query:  PSYYIAY
        PS  I++
Subjt:  PSYYIAY

KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]1.0e-10163.48Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MGRRNRA PRR  P I++VWASNFD EI + ++CLQ + ILSIDTEFPG I  +PWGS +E +YED RFNVNQTKLIQLG+TASD SGQ+ G+WEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR
        FD Q D   PSS+SFLE NG+DF KLKK GIP++LFT NF  IIR+  V +WVTFHGLYDIGYL+KAMG+   LPESMEEFA +V  GVG+VRDLK ++R
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSI
        +CEGLE G++GLERLG+LL +KR+G KH+AGSDSLLTA  H +M   F ++ G  DG LYG  NKLE MK+          + I F QI  S+
Subjt:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSI

XP_022947867.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]4.7e-9965.43Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MGRRNR  PRR  P I++VWASNFD EI + ++CLQ + ILSIDTEFPG I  +PWGS +E +YED RFNVNQTKLIQLG+TASD SGQ+ G+WEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR
        FD Q D   PSS++FLE NG+DF KLKK GIP++LFT NF  IIR+  V +WVTFHGLYDIGYL+KAMG+   LPESMEEFA +V  GVG+VRDLK ++R
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESM
        +CEGLE G++GLERLG+LL +KR+G KH+AGSDSLLTA  H +M   F ++    DG LYG  NKL+ M
Subjt:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESM

XP_031736916.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]3.3e-12171.01Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MG RN+    REKPLIRQVWASNFDSEI++FD+CL+FH+IL+IDTEFPGFI +SP GS ++E+Y+DF FNVNQTKLIQLGITASD+ GQIGG+WEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR
        FD ++DAH P ++ FLE NG+D +K+KKDGIPI  FT  FL I+RK ++FRWVTFHGLYDIGYLIKAMGLI VLP+SMEEFATVVV  VGIVRDLKHM++
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLED-GKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYT
        FCEGL+D G+LGLERLG+LLN KR+G KHNAGSDSLLTAS+HLEM+ERFGM+  +C+GFLYGFS  LESMKMKMKMK+ HH  ++RFS          Y 
Subjt:  FCEGLED-GKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYT

Query:  PSYYIAY
        P Y++ Y
Subjt:  PSYYIAY

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]6.9e-12775.08Show/hide
Query:  RREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHG
        R  K LI +VWASNFD+EISK ++CL+FH+I+SIDTEFPGFI  SPWGS +E +YEDFRFNVNQTKLIQLG+TA D+SG+IGG+WEFNFSDFDP+ DA  
Subjt:  RREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHG

Query:  PSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGK
        PSS SFLE NG+DF KLKK GIPI LFTA F+ IIRKHNVFRWVTFHGLYDIGYLIKAMG+  VLPE+MEEFATVVV  +GIVRDLKHM+RFCEGLEDGK
Subjt:  PSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGK

Query:  LGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYTPSYYIAY
        LGLERLG+LL+QKRYG KHNAGSDSLLTAS+H EM++RF MD  ICDG+LYGFSNKL+SM + M M    H K+I F QIP++IPLYCY PSY   Y
Subjt:  LGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYTPSYYIAY

TrEMBL top hitse value%identityAlignment
A0A0A0LPP0 Poly(A)-specific ribonuclease1.6e-12171.01Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MG RN+    REKPLIRQVWASNFDSEI++FD+CL+FH+IL+IDTEFPGFI +SP GS ++E+Y+DF FNVNQTKLIQLGITASD+ GQIGG+WEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR
        FD ++DAH P ++ FLE NG+D +K+KKDGIPI  FT  FL I+RK ++FRWVTFHGLYDIGYLIKAMGLI VLP+SMEEFATVVV  VGIVRDLKHM++
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLED-GKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYT
        FCEGL+D G+LGLERLG+LLN KR+G KHNAGSDSLLTAS+HLEM+ERFGM+  +C+GFLYGFS  LESMKMKMKMK+ HH  ++RFS          Y 
Subjt:  FCEGLED-GKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYT

Query:  PSYYIAY
        P Y++ Y
Subjt:  PSYYIAY

A0A5A7TRG1 Poly(A)-specific ribonuclease2.9e-11569.38Show/hide
Query:  MGRRNRAPPRR-EKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFS
        MG RN+   RR +KP IRQVWASNF+SEI++FD+CL+FH+IL+IDTEFPGFI +SP  S +EEIY++FRFNVNQ KLIQLGITAS++ GQIGG+WEFNFS
Subjt:  MGRRNRAPPRR-EKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFS

Query:  DFDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMS
        DFD Q D+H PS++ FLE NG+DF+KLKK GIPI  FT  FL II+K ++FRWVTFHGLYDIGYLIKAMGLI VLP+SMEEFAT+VV  VGIVRDLKHM+
Subjt:  DFDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMS

Query:  RFCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYT
        RFCEGLEDG+LGLERLG++LN+KR+G KHNAGSDSLLTAS+H EM++RFGM   +C+GFLYGFS  LES    MKM +YHH  ++R  QIP     + YT
Subjt:  RFCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYT

Query:  PSYYIAY
        PS  I++
Subjt:  PSYYIAY

A0A6J1CXP9 Poly(A)-specific ribonuclease4.2e-9859.48Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MGR  R   RR    IR+VW+ NFD E++  + CL  + IL+IDTEFPGFI  +PWG+ EE++Y+DFRFNVN+TKLIQLG+TASD  G IG TWEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR
        FDPQ D H  SSVSFL+ NG+DF KLK+ GIPI  FT+    + RKH + RWVTFHGLYDIGYL+KAMG+   +PESMEEFA +V   +G V DLKHM++
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYTP
        FCEGLEDGKLGLE+L QL+NQKR+G KH+AGSDSLLTAS + +M  +F +   +CDGFLYG   KL +     K+K+Y +   + F QIP+ +   CY P
Subjt:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYTP

Query:  SYYIAY
          YIAY
Subjt:  SYYIAY

A0A6J1G7L2 Poly(A)-specific ribonuclease2.3e-9965.43Show/hide
Query:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD
        MGRRNR  PRR  P I++VWASNFD EI + ++CLQ + ILSIDTEFPG I  +PWGS +E +YED RFNVNQTKLIQLG+TASD SGQ+ G+WEFNFSD
Subjt:  MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSD

Query:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR
        FD Q D   PSS++FLE NG+DF KLKK GIP++LFT NF  IIR+  V +WVTFHGLYDIGYL+KAMG+   LPESMEEFA +V  GVG+VRDLK ++R
Subjt:  FDPQSDAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSR

Query:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESM
        +CEGLE G++GLERLG+LL +KR+G KH+AGSDSLLTA  H +M   F ++    DG LYG  NKL+ M
Subjt:  FCEGLEDGKLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESM

A0A6J1G7T4 Poly(A)-specific ribonuclease2.3e-9661.85Show/hide
Query:  PRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAH
        PR + PLIR+VWA N D EI + D+CL  +SI+SIDTEFPG I ++PWG+ +EE+Y DFRFNVNQTK+IQLG+T SD SG IGGTWEFNFSDFDP+ DAH
Subjt:  PRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAH

Query:  GPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDG
         P+S+ FL+ NG+DF KLKKDGI +  F   FL  + KH ++RWVTFHGLYDIGYL+ AMG++  LPE++ EF  +V   VG VRDLKHM+RFCEGLE G
Subjt:  GPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDG

Query:  KLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVY
         LGLE+LGQLL+QKR+G KH+AGSDSL+TA  H +M++R+     ICDGFLYG S K E +      ++Y
Subjt:  KLGLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVY

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 54.3e-3940.36Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N  +E++    CL+  + ++IDTEFPG + ++P  +++E  Y D +FNV+ T LIQLG+T       I  TWE N SDF+         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTANFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
        +NG+D  K++++GI I  F   F  I+  KH   RWVTF G YD  YL+K +     LPE+ +EF   V + +G  V D+K M+  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTANFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  +R G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

Q9C6M9 Putative CCR4-associated factor 1 homolog 41.3e-3840.81Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N + E+     CL+  S ++IDTEFPG + ++P  ++EE  Y D +FNV+ T LIQLG T  D  G I  TWE N SDF+         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTANFLSIIR-KHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
         NG++  K+ ++GI I  F  +F  I++ K     WV F G YD  YL+K +     LPE+ EEF   V + +G  V D+K ++  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTANFLSIIR-KHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  KR G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

Q9LXM4 Putative CCR4-associated factor 1 homolog 88.7e-4041.89Show/hide
Query:  ISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLEDNGMDFQKLK
        +S  + CL+ +  ++IDTEFP  + ++   +T+EE Y D  F+V++ KLIQLG+T  D +G+IGGTWE NFSDF    DA    S+ FL  NG+D +K++
Subjt:  ISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLEDNGMDFQKLK

Query:  KDGIPITLFTANFLSIIRK-HNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKLGLERLGQLLNQKRYGW
        ++GI I  F +    +++K      WVTFHG YDI YL+K     A LP + E F+  V   +G V DLK M+  CEGL   +LGLE L       R G 
Subjt:  KDGIPITLFTANFLSIIRK-HNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKLGLERLGQLLNQKRYGW

Query:  KHNAGSDSLLTASSHLEMMERF
         H+AGS++ LTA    +++  F
Subjt:  KHNAGSDSLLTASSHLEMMERF

Q9SFX6 Putative CCR4-associated factor 1 homolog 35.6e-3940.81Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N + E++    CL+  S ++IDTEFPG + ++P  ++EE  Y D +FNV+ T LIQLG T  D  G    TWE N SDFD         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTANFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
         NG++  K++++GI I  F  +F  I+  K     WV F G YD  YL+K +     LPE+ EEF   V + +G  V D+K ++  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTANFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  KR G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

Q9SHJ0 Probable CCR4-associated factor 1 homolog 18.9e-4539.44Show/hide
Query:  KPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSS
        +PL R+VW SN D E+++  +CL+   +++ DTE+PG I ++ + S+ +E Y   + NV  TKLIQ G T  +  G+IGG WE NFS+F   SD     S
Subjt:  KPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSS

Query:  VSFLEDNGMDFQKLKKDGIPI--TLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKL
        + FL  +G+D QK++ +G+ +    F    +++ R      +VTF G YD  Y +  +     LPE+  EFAT VV+  G V D K M+ FCEGL +  L
Subjt:  VSFLEDNGMDFQKLKKDGIPI--TLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKL

Query:  GLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYG
        GL +L QLL   R G  H+AGSDSL+TA   +++   +  D     G +YG
Subjt:  GLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYG

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.4e-4639.44Show/hide
Query:  KPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSS
        +PL R+VW SN D E+++  +CL+   +++ DTE+PG I ++ + S+ +E Y   + NV  TKLIQ G T  +  G+IGG WE NFS+F   SD     S
Subjt:  KPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSS

Query:  VSFLEDNGMDFQKLKKDGIPI--TLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKL
        + FL  +G+D QK++ +G+ +    F    +++ R      +VTF G YD  Y +  +     LPE+  EFAT VV+  G V D K M+ FCEGL +  L
Subjt:  VSFLEDNGMDFQKLKKDGIPI--TLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKL

Query:  GLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYG
        GL +L QLL   R G  H+AGSDSL+TA   +++   +  D     G +YG
Subjt:  GLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYG

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.0e-4040.81Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N + E++    CL+  S ++IDTEFPG + ++P  ++EE  Y D +FNV+ T LIQLG T  D  G    TWE N SDFD         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTANFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
         NG++  K++++GI I  F  +F  I+  K     WV F G YD  YL+K +     LPE+ EEF   V + +G  V D+K ++  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTANFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  KR G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.9e-4040.81Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N + E+     CL+  S ++IDTEFPG + ++P  ++EE  Y D +FNV+ T LIQLG T  D  G I  TWE N SDF+         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTANFLSIIR-KHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
         NG++  K+ ++GI I  F  +F  I++ K     WV F G YD  YL+K +     LPE+ EEF   V + +G  V D+K ++  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTANFLSIIR-KHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  KR G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.1e-4040.36Show/hide
Query:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE
        +VW  N  +E++    CL+  + ++IDTEFPG + ++P  +++E  Y D +FNV+ T LIQLG+T       I  TWE N SDF+         S++FL+
Subjt:  QVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLE

Query:  DNGMDFQKLKKDGIPITLFTANFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL
        +NG+D  K++++GI I  F   F  I+  KH   RWVTF G YD  YL+K +     LPE+ +EF   V + +G  V D+K M+  C GL   + GL+R+
Subjt:  DNGMDFQKLKKDGIPITLFTANFLSII-RKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVG-IVRDLKHMSRFCEGLEDGKLGLERL

Query:  GQLLNQKRYGWKHNAGSDSLLTA
          +L  +R G  H+AGSDS LTA
Subjt:  GQLLNQKRYGWKHNAGSDSLLTA

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.2e-4141.89Show/hide
Query:  ISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLEDNGMDFQKLK
        +S  + CL+ +  ++IDTEFP  + ++   +T+EE Y D  F+V++ KLIQLG+T  D +G+IGGTWE NFSDF    DA    S+ FL  NG+D +K++
Subjt:  ISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQSDAHGPSSVSFLEDNGMDFQKLK

Query:  KDGIPITLFTANFLSIIRK-HNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKLGLERLGQLLNQKRYGW
        ++GI I  F +    +++K      WVTFHG YDI YL+K     A LP + E F+  V   +G V DLK M+  CEGL   +LGLE L       R G 
Subjt:  KDGIPITLFTANFLSIIRK-HNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKLGLERLGQLLNQKRYGW

Query:  KHNAGSDSLLTASSHLEMMERF
         H+AGS++ LTA    +++  F
Subjt:  KHNAGSDSLLTASSHLEMMERF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGAAGAAATCGAGCACCTCCGAGAAGAGAAAAGCCTTTGATCCGACAAGTTTGGGCTTCGAATTTCGATTCCGAAATCTCCAAATTCGACAAATGTCTT
CAATTTCATTCCATTCTGTCTATCGACACAGAATTTCCTGGGTTTATTACAAAATCCCCTTGGGGTTCGACTGAAGAAGAGATTTATGAAGATTTCCGATTCAAT
GTAAACCAAACCAAATTGATTCAACTGGGTATTACGGCTTCTGATAATTCGGGACAAATCGGCGGTACATGGGAATTCAATTTCTCCGATTTCGACCCACAATCC
GACGCTCATGGCCCTTCCTCTGTTTCGTTTCTGGAAGACAACGGCATGGATTTCCAAAAACTGAAGAAAGACGGAATACCCATCACATTATTCACCGCAAATTTC
TTGAGCATCATACGAAAACATAATGTTTTCAGATGGGTTACCTTCCATGGGTTGTACGATATCGGGTATTTGATCAAAGCCATGGGTTTAATCGCCGTCTTGCCG
GAATCAATGGAGGAATTCGCGACGGTGGTGGTGGAGGGAGTGGGAATCGTGAGGGATTTGAAACATATGTCTCGATTTTGTGAGGGATTGGAAGATGGGAAACTT
GGGCTGGAAAGATTAGGGCAATTGCTCAATCAAAAACGGTATGGATGGAAGCATAATGCTGGATCGGATAGTTTGCTTACGGCTTCTTCCCATTTGGAAATGATG
GAACGATTTGGCATGGATCCAGGAATTTGTGATGGCTTTTTGTATGGCTTTTCGAATAAGCTTGAATCCATGAAGATGAAGATGAAGATGAAGGTTTATCATCAT
CCCAAGATGATTCGATTTAGTCAAATTCCATGGTCAATCCCACTTTATTGTTATACTCCTTCTTATTACATTGCTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGAAGAAATCGAGCACCTCCGAGAAGAGAAAAGCCTTTGATCCGACAAGTTTGGGCTTCGAATTTCGATTCCGAAATCTCCAAATTCGACAAATGTCTT
CAATTTCATTCCATTCTGTCTATCGACACAGAATTTCCTGGGTTTATTACAAAATCCCCTTGGGGTTCGACTGAAGAAGAGATTTATGAAGATTTCCGATTCAAT
GTAAACCAAACCAAATTGATTCAACTGGGTATTACGGCTTCTGATAATTCGGGACAAATCGGCGGTACATGGGAATTCAATTTCTCCGATTTCGACCCACAATCC
GACGCTCATGGCCCTTCCTCTGTTTCGTTTCTGGAAGACAACGGCATGGATTTCCAAAAACTGAAGAAAGACGGAATACCCATCACATTATTCACCGCAAATTTC
TTGAGCATCATACGAAAACATAATGTTTTCAGATGGGTTACCTTCCATGGGTTGTACGATATCGGGTATTTGATCAAAGCCATGGGTTTAATCGCCGTCTTGCCG
GAATCAATGGAGGAATTCGCGACGGTGGTGGTGGAGGGAGTGGGAATCGTGAGGGATTTGAAACATATGTCTCGATTTTGTGAGGGATTGGAAGATGGGAAACTT
GGGCTGGAAAGATTAGGGCAATTGCTCAATCAAAAACGGTATGGATGGAAGCATAATGCTGGATCGGATAGTTTGCTTACGGCTTCTTCCCATTTGGAAATGATG
GAACGATTTGGCATGGATCCAGGAATTTGTGATGGCTTTTTGTATGGCTTTTCGAATAAGCTTGAATCCATGAAGATGAAGATGAAGATGAAGGTTTATCATCAT
CCCAAGATGATTCGATTTAGTCAAATTCCATGGTCAATCCCACTTTATTGTTATACTCCTTCTTATTACATTGCTTATTAA
Protein sequenceShow/hide protein sequence
MGRRNRAPPRREKPLIRQVWASNFDSEISKFDKCLQFHSILSIDTEFPGFITKSPWGSTEEEIYEDFRFNVNQTKLIQLGITASDNSGQIGGTWEFNFSDFDPQS
DAHGPSSVSFLEDNGMDFQKLKKDGIPITLFTANFLSIIRKHNVFRWVTFHGLYDIGYLIKAMGLIAVLPESMEEFATVVVEGVGIVRDLKHMSRFCEGLEDGKL
GLERLGQLLNQKRYGWKHNAGSDSLLTASSHLEMMERFGMDPGICDGFLYGFSNKLESMKMKMKMKVYHHPKMIRFSQIPWSIPLYCYTPSYYIAY