CuGenDBv2

Gene ID	CaUC02G040320
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	30S ribosomal protein S8, chloroplastic
Genome location	Ciama_Chr02:27468543..27468915
RNA-Seq Expression	CaUC02G040320
Synteny	CaUC02G040320
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR000630 - Ribosomal protein S8 IPR035987 - Ribosomal protein S8 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ALO21939.1 ribosomal protein S8 [Cucurbita cordata]

2.5e-25

82.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIEN+RKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYSNYQQIPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

QZL38629.1 ribosomal protein S8 [Citrullus naudinianus]

1.9e-25

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYSNYQQIPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

YP_009236314.1 ribosomal protein S8 [Gynostemma pentaphyllum]

2.5e-25

82.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  NNKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYSNYQ+IPRILG +G VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

YP_009326025.1 ribosomal protein S8 [Citrullus lanatus]

1.9e-25

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYSNYQQIPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

YP_009447486.1 ribosomal protein S8 [Cucurbita maxima]

2.5e-25

82.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIEN+RKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYSNYQQIPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE42 Ribosomal protein S8

9.1e-26

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYSNYQQIPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

A0A1P8LEK4 Ribosomal protein S8

9.1e-26

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYSNYQQIPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

A0A343A8E6 30S ribosomal protein S8, chloroplastic

9.1e-26

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYSNYQQIPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

A0A7T3QNL9 Ribosomal protein S8

9.1e-26

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYSNYQQIPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

X2F6H3 30S ribosomal protein S8, chloroplastic

9.1e-26

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYSNYQQIPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

SwissProt top hits

e value

%identity

Alignment

Q1KXS3 30S ribosomal protein S8, chloroplastic

3.9e-26

78.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  NNKDF VLTLRHRRNRK PY+ +LNLKRIS+ GL+IYSNYQ+IPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

Q2MIF2 30S ribosomal protein S8, chloroplastic

3.3e-25

78.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  NNK F VLTLRHRRNRK PY+ ILNLKRIS+ GL+IYSNYQ+IPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

Q49KW3 30S ribosomal protein S8, chloroplastic

3.3e-25

78.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFI+NVRKH  NNK F VLTLRHRRNRK PY+TILNLKRIS+ GL+IYSNYQ+IPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

Q4VZK0 30S ribosomal protein S8, chloroplastic

7.2e-28

82.67

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  +NKDFWVLTLRHRRNRK PYKTILNLKRIS+ GL+IYSNYQ+IPRILG MG VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

Q68RX1 30S ribosomal protein S8, chloroplastic

3.3e-25

77.33

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  N KDF VLTLRHRRNRK PY+ ILNLKRIS+ GL+IYSNYQ+IPRILG +G VILS SR  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

Arabidopsis top hits

e value

%identity

Alignment

ATCG00770.1 ribosomal protein S8

4.9e-24

73.33

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Query:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD
        GFIENVRKH  NN+ F +LTLRHRRN+KE YKTILNLKRIS+ GL+IYSN Q+IPRILG +G VILS S+  MTD
Subjt:  GFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

Sequences

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CDS sequence

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ATGGGTTTTATCGAGAACGTACGAAAACATTGGGGAAACAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGAACCATATAAAACGATTTTAAA
TTTAAAACGGATCAGTCAATCTGGTCTCCAAATATATTCTAACTATCAACAAATTCCTAGAATTTTAGGCAGGATGGGCACTGTGATTCTTTCTATTTCTCGGGATAGAA
TGACAGACTGA

mRNA sequence

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Protein sequence

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MGFIENVRKHWGNNKDFWVLTLRHRRNRKEPYKTILNLKRISQSGLQIYSNYQQIPRILGRMGTVILSISRDRMTD

CaUC02G040320 (gene) of Watermelon (USVL246-FR2) v1 genome