; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G041180 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G041180
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionF-box domain LysM domain containing protein
Genome locationCiama_Chr02:28502600..28505106
RNA-Seq ExpressionCaUC02G041180
SyntenyCaUC02G041180
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR018392 - LysM domain
IPR036047 - F-box-like domain superfamily
IPR036779 - LysM domain superfamily
IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139174.1 F-box protein At1g55000 [Cucumis sativus]6.9e-13990.71Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP + S P QPPPAD S ++LSPMNSHFFALSCRDILRLIF+NLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP +LINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        T HLYGK+T + G SSVQVNKRVLH+LSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_022150720.1 F-box protein At1g55000 [Momordica charantia]1.3e-13288.1Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNP+  V S    PP ADSST+VLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        VIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIPT
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        THHLYGK+TC+ G SSVQVNK+VLH+LSRSMMVDDETA+YYLSIS+G+PRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_022937590.1 F-box protein At1g55000 [Cucurbita moschata]2.6e-13088.15Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCC++DDDVEILRHL+PSPTVQS P Q P   DSST+VLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP
        DVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV  +YLDGIP
Subjt:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP

Query:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        TTHHLYGK T   G SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_023537183.1 F-box protein At1g55000 [Cucurbita pepo subsp. pepo]1.5e-13087.23Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLP-----LQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAP
        MGCCC++DDDVEILRHL+PSPTVQS P      QP   DSST+VLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCV RLW+SVASDQEIVSGAFKAP
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLP-----LQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAP

Query:  WKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYL
        WKVKDVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV  +YL
Subjt:  WKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYL

Query:  DGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        DGIPTTHHLYGK T  HG SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  DGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_038877035.1 F-box protein At1g55000 [Benincasa hispida]1.5e-13891.08Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP VQSLP +PPP DSS  VLSPMNSHF ALSCRDILRLIF+NLSIPDLARSSCV RLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNM+SDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        THHLYGK TC+ G SSVQVNKRVLH LSRSMMVDDETAQYYLSISNG+PRAALTEFAEDIRWERH+SIA
Subjt:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

TrEMBL top hitse value%identityAlignment
A0A0A0LFS6 LysM domain-containing protein3.3e-13990.71Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP + S P QPPPAD S ++LSPMNSHFFALSCRDILRLIF+NLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP +LINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        T HLYGK+T + G SSVQVNKRVLH+LSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A5A7TYE5 Lipoxygenase3.3e-11089.91Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP V S PLQPPPAD ST++LSPMNSHFFALSCRDILRLIF++LSIPDLARSSCVCRLWHSVASDQEIV+GAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQ
        T HLYGK+T + G SSVQ
Subjt:  THHLYGKMTCKHGTSSVQ

A0A6J1D9A3 F-box protein At1g550006.1e-13388.1Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNP+  V S    PP ADSST+VLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        VIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIPT
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        THHLYGK+TC+ G SSVQVNK+VLH+LSRSMMVDDETA+YYLSIS+G+PRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A6J1FH66 F-box protein At1g550001.3e-13088.15Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCC++DDDVEILRHL+PSPTVQS P Q P   DSST+VLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP
        DVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV  +YLDGIP
Subjt:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP

Query:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        TTHHLYGK T   G SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A6J1HS58 F-box protein At1g550001.4e-12987.41Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCC++DDDVEILRHL+PSPTVQS P Q P    SST+VLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP
        DVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRER+LIPIGNP ILINSICYIEMDAIAKREV  +YLDGIP
Subjt:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP

Query:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        TTHHLYGK T   G SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

SwissProt top hitse value%identityAlignment
Q5HZA4 LysM and putative peptidoglycan-binding domain-containing protein 18.8e-0435.21Show/hide
Query:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI-GNPKILINSICYIEMDAIAKREV
        + H++  GD+LA LA+KY V +  IKR N + ++  I+ ++ L IPI   P+ L N +   E +   + EV
Subjt:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI-GNPKILINSICYIEMDAIAKREV

Q6DEF4 LysM and putative peptidoglycan-binding domain-containing protein 23.0e-0439.29Show/hide
Query:  LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPK
        LG+  I HR+  G++L  +A+KY V +  IKR+N + S+  I+ R  L IP+ + K
Subjt:  LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPK

Q9FZ32 F-box protein At1g550001.2e-7258.64Show/hide
Query:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IFQ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P         T +    S    +R++ +L RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

Arabidopsis top hitse value%identityAlignment
AT1G55000.1 peptidoglycan-binding LysM domain-containing protein8.3e-7458.64Show/hide
Query:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IFQ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P         T +    S    +R++ +L RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT1G55000.2 peptidoglycan-binding LysM domain-containing protein8.3e-7458.64Show/hide
Query:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IFQ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P         T +    S    +R++ +L RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT1G55000.3 peptidoglycan-binding LysM domain-containing protein8.3e-7458.64Show/hide
Query:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IFQ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P         T +    S    +R++ +L RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein5.1e-0740.32Show/hide
Query:  SSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        SS  F   NS  +  I HRI + D+LA +A+KY V+V D+K++NN+++D  +++ + L IP+
Subjt:  SSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein1.6e-0542.55Show/hide
Query:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L IP+
Subjt:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGCTGTTGCGAACAAGACGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCGACCGTTCAGTCTCTGCCGCTGCAACCTCCACCGGCGGATTCCTCCAC
TTCCGTACTATCTCCAATGAACTCTCACTTTTTCGCCCTCTCCTGTCGCGACATCCTTCGTCTCATCTTTCAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCG
TTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGATCGGGAAGCCGAGCTCCTGGAGCTTC
TGGAGAGATAATTCCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTACAGACATAAAACG
TCTGAACAACATGATGAGCGACCATGGGATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAAGATACTCATTAACAGTATATGCTACATCGAGATGGATG
CTATCGCAAAACGGGAAGTTGTGGTGATGTATTTGGATGGAATCCCCACGACCCATCACTTGTATGGTAAGATGACATGCAAACATGGTACGTCTTCTGTTCAAGTGAAC
AAGCGGGTACTGCATACATTGAGTCGGAGCATGATGGTTGATGATGAAACAGCTCAATATTACTTATCCATTTCAAATGGCAATCCTCGAGCTGCTCTTACAGAATTCGC
CGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAG
mRNA sequenceShow/hide mRNA sequence
GAAAAAGGGTTATCCGTACAATTAACAACCCAAATATTTCCAATCCTATCCCTTAATTCTAGAGATTGCAATTTGCTCAAATAAAATCCGACAAATAACAACCATTCATT
TCTCTCTCTAAAATGGGATGCTGTTGCGAACAAGACGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCGACCGTTCAGTCTCTGCCGCTGCAACCTCCACCGGC
GGATTCCTCCACTTCCGTACTATCTCCAATGAACTCTCACTTTTTCGCCCTCTCCTGTCGCGACATCCTTCGTCTCATCTTTCAGAACCTTTCCATCCCCGACTTGGCTC
GTTCCAGCTGCGTTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGATCGGGAAGCCGAGC
TCCTGGAGCTTCTGGAGAGATAATTCCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTAC
AGACATAAAACGTCTGAACAACATGATGAGCGACCATGGGATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAAGATACTCATTAACAGTATATGCTACA
TCGAGATGGATGCTATCGCAAAACGGGAAGTTGTGGTGATGTATTTGGATGGAATCCCCACGACCCATCACTTGTATGGTAAGATGACATGCAAACATGGTACGTCTTCT
GTTCAAGTGAACAAGCGGGTACTGCATACATTGAGTCGGAGCATGATGGTTGATGATGAAACAGCTCAATATTACTTATCCATTTCAAATGGCAATCCTCGAGCTGCTCT
TACAGAATTCGCCGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAGTTTCATAATGGCAGATTGTTGCTTTGGAGTAAAGATAGTATATAAATTATACAGGTGC
TTTCTACTGGAATGTGTTGATCTTCCTCTCCATATCCACAAAGAATGTTTAGATTAAGAATCCATATCCAACATCAGTTCACTCCTTGGCTGATTGGTATGTGCATCTAC
ATTCTTACTATCATTTGAGTATGATATTTGACCTTGTTTCAATATTGTATATATGATGTCTTTTCATATTACTTGAAGATGATGATGCTCTAATATTTGTAACTGTAAAT
TGAATGTCCTTGGAAGTTAAAACCATGTCTGTTAAGACAAAAACATCGGAAGCAAACTACGTTTCCCCTATAATTTGTGAACATAAAGATTGAATTAGGGGTGTAAGCGA
GTCTGTTTGTGTTACTTTTCGTTTGCTATCAAGATTGAGATAAGGATGGAAGGAAATTAAGCTAGG
Protein sequenceShow/hide protein sequence
MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTSVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSF
WRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVN
KRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA