CuGenDBv2

Gene ID	CaUC02G042020
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	PITH domain-containing protein
Genome location	Ciama_Chr02:29405544..29409137
RNA-Seq Expression	CaUC02G042020
Synteny	CaUC02G042020
Gene Ontology terms	NA
InterPro domains	IPR008979 - Galactose-binding-like domain superfamily IPR010400 - PITH domain IPR037047 - PITH domain superfamily IPR045099 - PITH domain-containing protein 1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008455826.1 PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo]

4.2e-89

96.02

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Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        MAAASAT+I+RNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKENMGFG
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVNDYPPSDTIVLSPDNLT   EVVKYVKFQNVRSLTIFIEDNQSG DTTKIQKIALYGTTVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

XP_022937687.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata]

4.2e-89

94.89

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Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        MAAASAT+IHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+L+YIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVNDYPPSDTIVLSPDNLT   EVVKYVKFQNVRSLTIFIEDNQSGADTTK+QKIALYGTTVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

XP_022946891.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata]

8.5e-90

96.59

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Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        MAAASAT+IHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVNDYPPSDTIVLSPDNLT   EVVKYVKFQNVRSLTIFIEDNQSGAD TK+QKIALYGTTVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

XP_022965977.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima]

4.7e-88

94.32

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Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        MAAASAT+IHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+L+YIPFNQVIKLHSLVIKG EEEGPRTVKLFSNKENMGFG
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVNDYPPSDTIVLSPDNLT   EVVKYVKFQNVRSLTIFIEDNQSGADTTK+QKIALYGTTVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

XP_038891254.1 PITH domain-containing protein At3g04780 [Benincasa hispida]

2.2e-90

97.73

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Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        MAAASAT IHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVNDYPPSDTIVLSPDNLT   EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C1X8 PITH domain-containing protein At3g04780

2.0e-89

96.02

Show/hide

Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        MAAASAT+I+RNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKENMGFG
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVNDYPPSDTIVLSPDNLT   EVVKYVKFQNVRSLTIFIEDNQSG DTTKIQKIALYGTTVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

A0A5D3D4D2 PITH domain-containing protein

2.0e-89

96.02

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Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        MAAASAT+I+RNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKENMGFG
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVNDYPPSDTIVLSPDNLT   EVVKYVKFQNVRSLTIFIEDNQSG DTTKIQKIALYGTTVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

A0A6J1FBX4 PITH domain-containing protein At3g04780-like

2.0e-89

94.89

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Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        MAAASAT+IHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+L+YIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVNDYPPSDTIVLSPDNLT   EVVKYVKFQNVRSLTIFIEDNQSGADTTK+QKIALYGTTVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

A0A6J1G4V6 PITH domain-containing protein At3g04780-like

4.1e-90

96.59

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Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        MAAASAT+IHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVNDYPPSDTIVLSPDNLT   EVVKYVKFQNVRSLTIFIEDNQSGAD TK+QKIALYGTTVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

A0A6J1KJE4 PITH domain-containing protein At3g04780-like

4.1e-90

96.59

Show/hide

Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        MAAASAT+IHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVNDYPPSDTIVLSPDNLT   EVVKYVKFQNVRSLTIFIEDNQSGAD TK+QKIALYGTTVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTA--EVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

SwissProt top hits

e value

%identity

Alignment

O43396 Thioredoxin-like protein 1

7.4e-28

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Query:  TSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVND
        T I +  +DL  FIN +G ECLN++  H F N     C   D+  LESD DEQLLI + FNQ +KL+S+  +GP+  +GP+ VK+F N   +M F     
Subjt:  TSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVND

Query:  YPPSDTIVLSPDNLTAEVV---KYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKI
          P+  + L+ D++  + +   +YVKFQNV S+TIF++ NQ   +TT+I      GT V+ T+M   K++
Subjt:  YPPSDTIVLSPDNLTAEVV---KYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKI

Q8CDN6 Thioredoxin-like protein 1

1.1e-26

39.29

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Query:  IHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDYP
        I +  +DL  FIN +G ECLN++  H F N     C   D   LESD DEQLLI + FNQ +KL+S+  +GP+  +GP+ VK+F N   +M F       
Subjt:  IHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDYP

Query:  PSDTIVLSPDNLTAEVV---KYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKI
        P+  + L+ D++  + +   +YVKFQNV S+T+F++ NQ   +TT+I      GT V+ T+M   K++
Subjt:  PSDTIVLSPDNLTAEVV---KYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKI

Q920J4 Thioredoxin-like protein 1

3.7e-27

39.41

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Query:  TSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVND
        T I +  +DL  FIN +G ECLN++  H F N     C   D   LESD DEQLLI + FNQ +KL+S+  +GP+  +GP+ VK+F N   +M F     
Subjt:  TSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVND

Query:  YPPSDTIVLSPDNLTAEVV---KYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKI
          P+  + L+ D++  + +   +YVKFQNV S+T+F++ NQ   +TT+I      GT V+ T+M   K++
Subjt:  YPPSDTIVLSPDNLTAEVV---KYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKI

Q9SQZ9 PITH domain-containing protein At3g04780

1.6e-67

73.3

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Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        M+A SA+ I + QVDL DFI+WSGVECLNQ+ SH+  NAL Q  R+++ L LESDADEQLLIYIPFNQVIKLHS  IKGPEEEGP+TVK FSNKE+M F 
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTAE--VVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVND+PPSDT  L+ +NL  +  V+KYVKFQNVRSLTIFIE NQSG++ TK+QKIALYG+TVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTAE--VVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

Q9USR1 Thioredoxin-like protein 1

1.2e-22

37.08

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Query:  AASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVI---KGPEEEGPRTVKLFSNK-ENMG
        A+S+++  +    L   I    +ECLNQ   H   +A N     N S  LESD DEQL+IYIPF +V+K+HS+ I   KG     P+T+KL+ N+  N+ 
Subjt:  AASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVI---KGPEEEGPRTVKLFSNK-ENMG

Query:  FGNVNDYPPS----DTIVLSPDNLTAEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIE
        F +   + P+    D +    D  T   +++VKFQ V SL IFI  N    +TTKI ++ L+G  V  +    L+K+E
Subjt:  FGNVNDYPPS----DTIVLSPDNLTAEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIE

Arabidopsis top hits

e value

%identity

Alignment

AT2G25950.1 Protein of unknown function (DUF1000)

4.6e-09

27.92

Show/hide

Query:  INWSGVECLNQNFS---HTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSL-VIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSP
        I+ S V  LN++ S    +   A  Q    +   L  ++ D +LL+++PF   +K+ S+ ++ GPE   P  +++F N+E + F +           L+ 
Subjt:  INWSGVECLNQNFS---HTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSL-VIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSP

Query:  DNLTAEV---VKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMK
        +NL   +    +Y KFQ+V ++T+   ++  G DTT+I+ I   G   E T +K
Subjt:  DNLTAEV---VKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMK

AT3G04780.1 Protein of unknown function (DUF1000)

1.2e-68

73.3

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Query:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG
        M+A SA+ I + QVDL DFI+WSGVECLNQ+ SH+  NAL Q  R+++ L LESDADEQLLIYIPFNQVIKLHS  IKGPEEEGP+TVK FSNKE+M F 
Subjt:  MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFG

Query:  NVNDYPPSDTIVLSPDNLTAE--VVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH
        NVND+PPSDT  L+ +NL  +  V+KYVKFQNVRSLTIFIE NQSG++ TK+QKIALYG+TVETTDMKGLKKIEDH
Subjt:  NVNDYPPSDTIVLSPDNLTAE--VVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTGCCGCATCTGCCACCTCTATTCATCGGAATCAGGTTGATCTGTCTGACTTCATTAACTGGTCTGGTGTTGAGTGCCTTAACCAGAATTTCAGCCACACTTTTAC
AAATGCTCTTAACCAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCAGATGAGCAGCTTTTGATATACATACCTTTTAATCAAGTCATTAAATTGCATT
CCTTGGTCATTAAGGGACCTGAAGAGGAAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAACGTCAATGACTACCCTCCCAGTGACACA
ATCGTGTTGTCCCCAGATAATCTTACGGCAGAGGTTGTAAAGTACGTGAAATTTCAAAATGTTCGTAGCTTGACAATTTTCATAGAGGATAACCAATCCGGAGCCGACAC
TACAAAAATTCAAAAGATTGCCTTGTACGGAACAACGGTTGAAACAACTGACATGAAGGGTCTGAAGAAGATCGAGGACCACTGA

mRNA sequence

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Protein sequence

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MAAASATSIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQLLIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDT
IVLSPDNLTAEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH

CaUC02G042020 (gene) of Watermelon (USVL246-FR2) v1 genome