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CaUC02G042130 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G042130
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionAuxin-responsive protein
Genome locationCiama_Chr02:29569507..29569767
RNA-Seq ExpressionCaUC02G042130
SyntenyCaUC02G042130
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR003311 - AUX/IAA protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063606.1 auxin-responsive protein IAA16 isoform X2 [Cucumis melo var. makuwa]2.9e-3087.36Show/hide
Query:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        MESG+NDE  AILINFEQTELRLGLPGG+  GGGKSSSAGKRGFMETVDLKLNL+SSMAS KEE TNLEEIKS SQ+PNDFAKPPSK
Subjt:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

XP_008455985.1 PREDICTED: auxin-responsive protein IAA16 isoform X1 [Cucumis melo]2.9e-3087.36Show/hide
Query:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        MESG+NDE  AILINFEQTELRLGLPGG+  GGGKSSSAGKRGFMETVDLKLNL+SSMAS KEE TNLEEIKS SQ+PNDFAKPPSK
Subjt:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

XP_008455992.1 PREDICTED: auxin-responsive protein IAA16 isoform X2 [Cucumis melo]2.9e-3087.36Show/hide
Query:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        MESG+NDE  AILINFEQTELRLGLPGG+  GGGKSSSAGKRGFMETVDLKLNL+SSMAS KEE TNLEEIKS SQ+PNDFAKPPSK
Subjt:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

XP_011648754.1 auxin-responsive protein IAA16 [Cucumis sativus]1.6e-3391.86Show/hide
Query:  MESGQNDECRAILINFEQTELRLGLPGGEIGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        MESGQNDE RAILINFEQTELRLGLPGG+ GGGKSSSAGKRGFMETVDLKLNL+SSMAS KEEATNLEEIK+SSQ+PNDFAKPPSK
Subjt:  MESGQNDECRAILINFEQTELRLGLPGGEIGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

XP_038890917.1 auxin-responsive protein IAA16-like [Benincasa hispida]3.4e-3187.64Show/hide
Query:  MESGQNDECRAILINFEQTELRLGLP---GGEIGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        MESGQNDE RAILINFEQTELRLGLP   GGE+ GGKSSSAGKRGFMETVDLKLNLS +MASVKEE TNLEEIK+SSQR NDFAKPPSK
Subjt:  MESGQNDECRAILINFEQTELRLGLP---GGEIGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

TrEMBL top hitse value%identityAlignment
A0A0A0LG78 Auxin-responsive protein7.9e-3491.86Show/hide
Query:  MESGQNDECRAILINFEQTELRLGLPGGEIGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        MESGQNDE RAILINFEQTELRLGLPGG+ GGGKSSSAGKRGFMETVDLKLNL+SSMAS KEEATNLEEIK+SSQ+PNDFAKPPSK
Subjt:  MESGQNDECRAILINFEQTELRLGLPGGEIGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

A0A1S3C1R1 Auxin-responsive protein1.4e-3087.36Show/hide
Query:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        MESG+NDE  AILINFEQTELRLGLPGG+  GGGKSSSAGKRGFMETVDLKLNL+SSMAS KEE TNLEEIKS SQ+PNDFAKPPSK
Subjt:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

A0A1S3C1R6 Auxin-responsive protein1.4e-3087.36Show/hide
Query:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        MESG+NDE  AILINFEQTELRLGLPGG+  GGGKSSSAGKRGFMETVDLKLNL+SSMAS KEE TNLEEIKS SQ+PNDFAKPPSK
Subjt:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

A0A5D3D4G0 Auxin-responsive protein IAA16 isoform X21.4e-3087.36Show/hide
Query:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        MESG+NDE  AILINFEQTELRLGLPGG+  GGGKSSSAGKRGFMETVDLKLNL+SSMAS KEE TNLEEIKS SQ+PNDFAKPPSK
Subjt:  MESGQNDECRAILINFEQTELRLGLPGGE-IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

A0A6J1G2X6 Auxin-responsive protein2.4e-3087.64Show/hide
Query:  MESGQNDECRAILINFEQTELRLGLPGGEIG---GGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        MES QNDE RAILINFEQTELRLGLPGG+ G   GGKSSSA KRGFMETVDLKLNLSSSMA  KEEATNLEE KSSSQRPNDFAKPPSK
Subjt:  MESGQNDECRAILINFEQTELRLGLPGGEIG---GGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

SwissProt top hitse value%identityAlignment
O24407 Auxin-responsive protein IAA163.8e-0956.41Show/hide
Query:  LINFEQTELRLGLPGGEIGG---GKSSSAGKRGFMETVDLKLNLSS-SMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        +INFE TELRLGLPGG  GG   GK++  GKRGF ETVDLKLNLSS +M SV +   +LE +K          KPP+K
Subjt:  LINFEQTELRLGLPGGEIGG---GKSSSAGKRGFMETVDLKLNLSS-SMASVKEEATNLEEIKSSSQRPNDFAKPPSK

P0C132 Auxin-responsive protein IAA305.1e-0642.68Show/hide
Query:  FEQTELRLGLPGGEIGGGKS-----SSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQR-------PNDFAKPPS
        FE TELRLGLPGG   G  +     SS+GKRGF ET+DLKL L  + A+V ++    E      ++        ND A PP+
Subjt:  FEQTELRLGLPGGEIGGGKS-----SSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQR-------PNDFAKPPS

P93830 Auxin-responsive protein IAA172.3e-0645Show/hide
Query:  AILINFEQTELRLGLPGGEIGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEI----KSSSQRPNDFAKPPSK
        ++ +N  +TEL LGLPGG+       +  KRGF ETVDLKLNL++  A+ KE +T  + +    K  S  P D AKPP+K
Subjt:  AILINFEQTELRLGLPGGEIGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEI----KSSSQRPNDFAKPPSK

Q38825 Auxin-responsive protein IAA72.8e-0441.56Show/hide
Query:  LINFEQTELRLGLPGGE---IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        L+N + TEL LGLPGG        KS+   KRGF ETVDL LNL S+      +  N+  +        D +KPP+K
Subjt:  LINFEQTELRLGLPGGE---IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

Q38832 Auxin-responsive protein IAA142.8e-0443.42Show/hide
Query:  INFEQTELRLGLPGGE---IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        +N ++TEL LGLPGG        KS    KRGF ETVDLKLNL S+     +  TN       + +   F K PSK
Subjt:  INFEQTELRLGLPGGE---IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

Arabidopsis top hitse value%identityAlignment
AT1G04250.1 AUX/IAA transcriptional regulator family protein1.6e-0745Show/hide
Query:  AILINFEQTELRLGLPGGEIGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEI----KSSSQRPNDFAKPPSK
        ++ +N  +TEL LGLPGG+       +  KRGF ETVDLKLNL++  A+ KE +T  + +    K  S  P D AKPP+K
Subjt:  AILINFEQTELRLGLPGGEIGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEI----KSSSQRPNDFAKPPSK

AT3G04730.1 indoleacetic acid-induced protein 162.7e-1056.41Show/hide
Query:  LINFEQTELRLGLPGGEIGG---GKSSSAGKRGFMETVDLKLNLSS-SMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        +INFE TELRLGLPGG  GG   GK++  GKRGF ETVDLKLNLSS +M SV +   +LE +K          KPP+K
Subjt:  LINFEQTELRLGLPGGEIGG---GKSSSAGKRGFMETVDLKLNLSS-SMASVKEEATNLEEIKSSSQRPNDFAKPPSK

AT3G23050.1 indole-3-acetic acid 72.0e-0541.56Show/hide
Query:  LINFEQTELRLGLPGGE---IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        L+N + TEL LGLPGG        KS+   KRGF ETVDL LNL S+      +  N+  +        D +KPP+K
Subjt:  LINFEQTELRLGLPGGE---IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

AT3G23050.2 indole-3-acetic acid 72.0e-0541.56Show/hide
Query:  LINFEQTELRLGLPGGE---IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        L+N + TEL LGLPGG        KS+   KRGF ETVDL LNL S+      +  N+  +        D +KPP+K
Subjt:  LINFEQTELRLGLPGGE---IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK

AT4G14550.1 indole-3-acetic acid inducible 142.0e-0543.42Show/hide
Query:  INFEQTELRLGLPGGE---IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK
        +N ++TEL LGLPGG        KS    KRGF ETVDLKLNL S+     +  TN       + +   F K PSK
Subjt:  INFEQTELRLGLPGGE---IGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCGGGGCAGAACGATGAGTGCAGAGCGATCTTGATCAATTTCGAGCAAACGGAGCTCCGCCTGGGATTGCCCGGCGGCGAAATCGGCGGCGGAAAGAGTAGTTC
GGCTGGGAAGAGAGGGTTTATGGAAACTGTGGATTTGAAGCTTAATTTATCTTCTTCAATGGCGTCGGTGAAGGAGGAAGCGACGAATTTGGAAGAGATTAAAAGTTCTT
CGCAACGGCCTAACGATTTTGCTAAACCTCCTTCCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCGGGGCAGAACGATGAGTGCAGAGCGATCTTGATCAATTTCGAGCAAACGGAGCTCCGCCTGGGATTGCCCGGCGGCGAAATCGGCGGCGGAAAGAGTAGTTC
GGCTGGGAAGAGAGGGTTTATGGAAACTGTGGATTTGAAGCTTAATTTATCTTCTTCAATGGCGTCGGTGAAGGAGGAAGCGACGAATTTGGAAGAGATTAAAAGTTCTT
CGCAACGGCCTAACGATTTTGCTAAACCTCCTTCCAAGTAA
Protein sequenceShow/hide protein sequence
MESGQNDECRAILINFEQTELRLGLPGGEIGGGKSSSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSK