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CaUC02G042150 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G042150
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionAuxin-responsive protein
Genome locationCiama_Chr02:29576324..29578048
RNA-Seq ExpressionCaUC02G042150
SyntenyCaUC02G042150
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599310.1 Auxin-responsive protein IAA16, partial [Cucurbita argyrosperma subsp. sororia]8.8e-3492.41Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        +G  ESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPR MEK K RS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

XP_022946129.1 auxin-responsive protein IAA14-like isoform X1 [Cucurbita moschata]1.8e-3493.67Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        +G  ESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPR MEK KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

XP_022999097.1 auxin-responsive protein IAA14-like [Cucurbita maxima]2.0e-3391.14Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        +G  ESEGMKDFMNERKLVDLLNGS+YVPTYEDKDGDWMLVGDVPW MFVDSCKRLRIMKESEAIGLAPR MEK KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

XP_023521166.1 auxin-responsive protein IAA16-like isoform X1 [Cucurbita pepo subsp. pepo]8.8e-3493.59Show/hide
Query:  GKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        G  ESEGMKDFM+ERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPR MEK KNRS
Subjt:  GKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

XP_023521167.1 auxin-responsive protein IAA16-like isoform X2 [Cucurbita pepo subsp. pepo]6.7e-3492.41Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        +G  ESEGMKDFM+ERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPR MEK KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

TrEMBL top hitse value%identityAlignment
A0A0A0LG78 Auxin-responsive protein2.1e-3392.21Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKN
        +GK ESEGMKDFMNE K VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKES+AIGLAPR+MEKQKN
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKN

A0A1S3C1R1 Auxin-responsive protein2.1e-3392.21Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKN
        +GK ESEGMKDFMNE K VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKES+AIGLAPR+MEKQKN
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKN

A0A6J1G2X5 Auxin-responsive protein8.6e-3593.67Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        +G  ESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPR MEK KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

A0A6J1K9W5 Auxin-responsive protein9.5e-3491.14Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        +G  ESEGMKDFMNERKLVDLLNGS+YVPTYEDKDGDWMLVGDVPW MFVDSCKRLRIMKESEAIGLAPR MEK KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

A0A6P3ZPA5 Auxin-responsive protein8.8e-3287.34Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        +G   S+GMKDFMNE KL+DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK SEAIGLAPRA+EK KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

SwissProt top hitse value%identityAlignment
O24407 Auxin-responsive protein IAA169.1e-3483.54Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        +G +  +GMKDFMNE KL+DLLNGS+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMK SEAIGLAPRA+EK KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

P0C132 Auxin-responsive protein IAA301.4e-2981.01Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        +G   S G+   MNE K+ DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFV+SCKRLRIMK SEAIGLAPRAMEK KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

P13089 Auxin-induced protein AUX281.2e-3082.5Show/hide
Query:  GKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAI--GLAPRAMEKQKNRS
        G  ES+GMKDFMNE KL DLLN S+YVPTYEDKDGDWMLVGDVPWEMFV+SCKRLRIMK  EAI  GLAPRAM K KNRS
Subjt:  GKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAI--GLAPRAMEKQKNRS

Q38825 Auxin-responsive protein IAA79.4e-3180Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQ-KNRS
        MG + ++GM DFMNE KL++LLN SEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMK SEA+GLAPRAMEK  KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQ-KNRS

Q38832 Auxin-responsive protein IAA141.5e-3181.01Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        MG + ++GM DFMNE K++DLLN SEYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMK SEAIGLAPRAMEK KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

Arabidopsis top hitse value%identityAlignment
AT1G04250.1 AUX/IAA transcriptional regulator family protein8.2e-3079.45Show/hide
Query:  EGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        EGM DFMNERKL+DL+N  +YVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MK S+AIGLAPRAMEK K+R+
Subjt:  EGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

AT3G04730.1 indoleacetic acid-induced protein 166.5e-3583.54Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        +G +  +GMKDFMNE KL+DLLNGS+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMK SEAIGLAPRA+EK KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

AT3G23050.1 indole-3-acetic acid 76.7e-3280Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQ-KNRS
        MG + ++GM DFMNE KL++LLN SEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMK SEA+GLAPRAMEK  KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQ-KNRS

AT4G14550.1 indole-3-acetic acid inducible 141.0e-3281.01Show/hide
Query:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        MG + ++GM DFMNE K++DLLN SEYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMK SEAIGLAPRAMEK KNRS
Subjt:  MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS

AT5G65670.2 indole-3-acetic acid inducible 93.2e-2667.9Show/hide
Query:  MGKWESEGM--KDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS
        +G+  S G   KD ++E KL DLLNG +YV TYEDKDGDWMLVGDVPWEMF+D CK+L+IMK  +AIGLAPRAMEK K R+
Subjt:  MGKWESEGM--KDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGTGGGAATCAGAAGGAATGAAGGATTTCATGAATGAAAGAAAATTGGTAGACCTTTTGAATGGTTCAGAATATGTACCCACTTATGAAGACAAAGAT
GGAGATTGGATGCTTGTTGGAGATGTGCCATGGGAGATGTTTGTTGATTCATGCAAACGTTTGAGGATCATGAAAGAGTCTGAAGCCATTGGATTAGCACCAAGA
GCAATGGAGAAGCAAAAGAACAGAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAGTGGGAATCAGAAGGAATGAAGGATTTCATGAATGAAAGAAAATTGGTAGACCTTTTGAATGGTTCAGAATATGTACCCACTTATGAAGACAAAGAT
GGAGATTGGATGCTTGTTGGAGATGTGCCATGGGAGATGTTTGTTGATTCATGCAAACGTTTGAGGATCATGAAAGAGTCTGAAGCCATTGGATTAGCACCAAGA
GCAATGGAGAAGCAAAAGAACAGAAGCTGA
Protein sequenceShow/hide protein sequence
MGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPRAMEKQKNRS