; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G042180 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G042180
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationCiama_Chr02:29592771..29593570
RNA-Seq ExpressionCaUC02G042180
SyntenyCaUC02G042180
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599312.1 hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sororia]1.0e-6988.73Show/hide
Query:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+ S +MIL LALG+LSLANAQ A NVRATYH YNPQDINWDYLRASVFCATWDANKP+EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNT TG+SEIV
Subjt:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG F+GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

XP_004139239.1 pathogenesis-related protein PR-4 [Cucumis sativus]2.5e-7191.55Show/hide
Query:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        M +GSIMMILVLALG+LSLANAQ ATNVRATYH YNPQDINWDYLRASVFCATWDA+KPLEWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN +GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]2.2e-7292.25Show/hide
Query:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+GSIMMILVLALG+LSLANAQ ATNVRATYH YNPQDINWDYLRASVFCATWDANKPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNF+GHL VNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]1.6e-7090.14Show/hide
Query:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+ SI+MIL LALG+LSLANAQ A NVRATYH YNPQDINWDYLRASVFCATWDANKP+EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG F+GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]3.2e-7190.85Show/hide
Query:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+GS +MIL LALGILSLANAQ A NVRATYH YNPQDINWDYLRASVFCATWDANKP+EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG F+GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein1.2e-7191.55Show/hide
Query:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        M +GSIMMILVLALG+LSLANAQ ATNVRATYH YNPQDINWDYLRASVFCATWDA+KPLEWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN +GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like1.1e-7292.25Show/hide
Query:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+GSIMMILVLALG+LSLANAQ ATNVRATYH YNPQDINWDYLRASVFCATWDANKPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNF+GHL VNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like1.1e-7292.25Show/hide
Query:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+GSIMMILVLALG+LSLANAQ ATNVRATYH YNPQDINWDYLRASVFCATWDANKPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNF+GHL VNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like7.8e-7190.14Show/hide
Query:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+ SI+MIL LALG+LSLANAQ A NVRATYH YNPQDINWDYLRASVFCATWDANKP+EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG F+GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like1.6e-7190.85Show/hide
Query:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+GS +MIL LALGILSLANAQ A NVRATYH YNPQDINWDYLRASVFCATWDANKP+EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG F+GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN18.3e-5476.27Show/hide
Query:  ATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRIDTN
        A NVRATYH YNPQ++ WD    S +C+TWDANKPL WR++YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQC+NGGLDLDVNVFR+IDT+
Subjt:  ATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRIDTN

Query:  GNGNFQGHLIVNYEFVNC
        GNGN QGHLIVNY+FV+C
Subjt:  GNGNFQGHLIVNYEFVNC

P09762 Wound-induced protein WIN21.7e-5173.73Show/hide
Query:  ATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRIDTN
        A NVRATYH YNPQ++ WD    S +C+TWDANKP  WR +YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQC+NGGLDLD+NVF++IDT+
Subjt:  ATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRIDTN

Query:  GNGNFQGHLIVNYEFVNC
        G GN QGHLIVNY+FVNC
Subjt:  GNGNFQGHLIVNYEFVNC

P29062 Pathogenesis-related protein PR-4A1.3e-5470.07Show/hide
Query:  IMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQ
        + + L++   ++++A AQ ATNVR+TYH YNPQ+INWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQ

Query:  CANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        C+NGGLDLDVNVF ++DTNG G  QGHL VNYEFVNC
Subjt:  CANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

P29063 Pathogenesis-related protein PR-4B5.8e-5570.8Show/hide
Query:  IMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQ
        + + L++   ++++A AQ ATNVR+TYH YNPQ+INWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQ

Query:  CANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        C+NGGLDLDVNVF ++DTNG G  QGHLIVNYEFVNC
Subjt:  CANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

P32045 Pathogenesis-related protein P22.0e-5570.63Show/hide
Query:  MERGSIMMILVLALG-ILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEI
        MER + + +    +  ++++A AQ ATNVRATYH YNPQ+INWD   ASV+CATWDA+KPLEWRR+YGWTAFCGP GP GQASCGRCLRVTNT TG  E 
Subjt:  MERGSIMMILVLALG-ILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEI

Query:  VRIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        VRIVDQC NGGLDLDVNVF R+DTNG G  +G+L VNYEFVNC
Subjt:  VRIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 43.2e-4869.49Show/hide
Query:  ATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRIDTN
        A+NVRATYHFYNP   NWD    S +C+TWDA+KP  WR +YGWTAFCGP GPRGQASCG+CLRV NT T A+  VRIVDQC+NGGLDLDV +F +IDT+
Subjt:  ATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRIDTN

Query:  GNGNFQGHLIVNYEFVNC
        G G  QGHLIV+Y+FV+C
Subjt:  GNGNFQGHLIVNYEFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGAAGTATTATGATGATTTTGGTGTTGGCTTTGGGGATTTTGAGTTTGGCAAATGCTCAAATTGCCACCAATGTGAGAGCTACTTATCATTTTTACAACCC
ACAAGATATTAATTGGGACTATCTTAGAGCAAGTGTTTTTTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGCCGCCAGTATGGCTGGACCGCCTTCTGTGGCC
CTGTTGGCCCTCGTGGTCAAGCTTCTTGTGGACGTTGTTTGAGGGTGACCAACACTGCGACAGGAGCTTCAGAAATAGTAAGAATTGTTGATCAATGCGCTAATGGAGGG
TTAGATTTGGATGTGAATGTGTTTAGGAGGATTGACACTAATGGAAATGGAAACTTCCAAGGCCATCTTATTGTCAATTATGAGTTTGTCAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
GTATGCACTCATATTCTTCTATAAATTAAAGCACTATCCCAATGAAACCATACATACAAACAAAAAAAAAAAGCGTACAAACATATATAAGTGAGAAAGTTATTAGAGAG
AATTAAGAAAGCAAAGAATGGAGAGAGGAAGTATTATGATGATTTTGGTGTTGGCTTTGGGGATTTTGAGTTTGGCAAATGCTCAAATTGCCACCAATGTGAGAGCTACT
TATCATTTTTACAACCCACAAGATATTAATTGGGACTATCTTAGAGCAAGTGTTTTTTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGCCGCCAGTATGGCTG
GACCGCCTTCTGTGGCCCTGTTGGCCCTCGTGGTCAAGCTTCTTGTGGACGTTGTTTGAGGGTGACCAACACTGCGACAGGAGCTTCAGAAATAGTAAGAATTGTTGATC
AATGCGCTAATGGAGGGTTAGATTTGGATGTGAATGTGTTTAGGAGGATTGACACTAATGGAAATGGAAACTTCCAAGGCCATCTTATTGTCAATTATGAGTTTGTCAAT
TGCTAAGATTTCTTGTTTAATTCAATTTCATTCTTCCTAGAAGAAGAAAGAAAATCATGTTGTAATGAATAAAGTACGAATAATAAAAAAGTATGAAATAAAGGTTTGTT
T
Protein sequenceShow/hide protein sequence
MERGSIMMILVLALGILSLANAQIATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGG
LDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC