; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G042190 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G042190
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationCiama_Chr02:29603988..29604964
RNA-Seq ExpressionCaUC02G042190
SyntenyCaUC02G042190
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139239.1 pathogenesis-related protein PR-4 [Cucumis sativus]4.2e-7190.85Show/hide
Query:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        M +GSIMMILVLALGV SLANAQSATNVRATYH YNPQ+INWDYL+ASVFCATWDA+KPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNGN +GHLIVNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]2.2e-7292.25Show/hide
Query:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGV SLANAQSATNVRATYH YNPQ+INWDYL+ASVFCATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNGN +GHL VNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]1.4e-6988.73Show/hide
Query:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+ SI+MIL LALGV SLANAQSA NVRATYH YNPQ+INWDYL+ASVFCATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG  +GHLIVNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]4.7e-7088.03Show/hide
Query:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GS +MIL LALG+ SLANAQSA NVRATYH YNPQ+INWDYL+ASVFCATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG  +GHLIVNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

XP_038890575.1 pathogenesis-related protein PR-4-like [Benincasa hispida]1.5e-7190.14Show/hide
Query:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGV S+ANAQSA NVRATYH YNPQNINWDYL+ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGAS IV
Subjt:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        RIVDQCSNGGLDLDVNVF+++DTNGNGN +GHL VNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein2.1e-7190.85Show/hide
Query:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        M +GSIMMILVLALGV SLANAQSATNVRATYH YNPQ+INWDYL+ASVFCATWDA+KPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNGN +GHLIVNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like1.1e-7292.25Show/hide
Query:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGV SLANAQSATNVRATYH YNPQ+INWDYL+ASVFCATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNGN +GHL VNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like1.1e-7292.25Show/hide
Query:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGV SLANAQSATNVRATYH YNPQ+INWDYL+ASVFCATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNGN +GHL VNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like6.6e-7088.73Show/hide
Query:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+ SI+MIL LALGV SLANAQSA NVRATYH YNPQ+INWDYL+ASVFCATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG  +GHLIVNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like2.3e-7088.03Show/hide
Query:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GS +MIL LALG+ SLANAQSA NVRATYH YNPQ+INWDYL+ASVFCATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG  +GHLIVNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN13.4e-5578.15Show/hide
Query:  SATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT
        SA NVRATYH YNPQN+ WD    S +C+TWDANKPL WR++YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQCSNGGLDLDVNVFR+IDT
Subjt:  SATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT

Query:  NGNGNSKGHLIVNYQFVNC
        +GNGN +GHLIVNYQFV+C
Subjt:  NGNGNSKGHLIVNYQFVNC

P09762 Wound-induced protein WIN23.2e-5375.63Show/hide
Query:  SATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT
        SA NVRATYH YNPQN+ WD    S +C+TWDANKP  WR +YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQCSNGGLDLD+NVF++IDT
Subjt:  SATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT

Query:  NGNGNSKGHLIVNYQFVNC
        +G GN +GHLIVNYQFVNC
Subjt:  NGNGNSKGHLIVNYQFVNC

P29062 Pathogenesis-related protein PR-4A1.2e-5571.53Show/hide
Query:  IMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ
        + + L++   V ++A AQSATNVR+TYH YNPQNINWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ

Query:  CSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        CSNGGLDLDVNVF ++DTNG G  +GHL VNY+FVNC
Subjt:  CSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

P29063 Pathogenesis-related protein PR-4B6.8e-5671.53Show/hide
Query:  IMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ
        + + L++   + ++A AQSATNVR+TYH YNPQNINWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ

Query:  CSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        CSNGGLDLDVNVF ++DTNG G  +GHLIVNY+FVNC
Subjt:  CSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

P32045 Pathogenesis-related protein P24.7e-5772.03Show/hide
Query:  MERGSIMMILVLALG-VFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEI
        MER + + +    +  + ++A AQSATNVRATYH YNPQNINWD   ASV+CATWDA+KPLEWRRRYGWTAFCGP GP GQASCGRCLRVTNT TG  E 
Subjt:  MERGSIMMILVLALG-VFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEI

Query:  VRIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC
        VRIVDQC NGGLDLDVNVF R+DTNG G  +G+L VNY+FVNC
Subjt:  VRIVDQCSNGGLDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 41.3e-4970Show/hide
Query:  QSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRID
        +SA+NVRATYHFYNP   NWD    S +C+TWDA+KP  WR +YGWTAFCGP GPRGQASCG+CLRV NT T A+  VRIVDQCSNGGLDLDV +F +ID
Subjt:  QSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRID

Query:  TNGNGNSKGHLIVNYQFVNC
        T+G G  +GHLIV+YQFV+C
Subjt:  TNGNGNSKGHLIVNYQFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGAAGTATTATGATGATTTTGGTGTTGGCTTTGGGGGTTTTTAGCTTGGCAAATGCTCAAAGTGCCACTAATGTGAGAGCTACTTATCATTTTTACAACCC
ACAAAATATCAATTGGGACTATCTTAAAGCAAGTGTTTTTTGTGCAACATGGGATGCTAACAAACCTTTAGAGTGGCGCCGTCGGTATGGCTGGACTGCCTTCTGCGGTC
CTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGGTGTTTGAGGGTGACGAACACTGAAACAGGAGCTTCAGAGATAGTGAGAATTGTTGATCAATGCTCTAATGGAGGG
TTGGATTTGGATGTGAATGTCTTTAGGAGGATTGACACTAATGGAAATGGAAACTCCAAAGGTCATCTTATTGTTAACTATCAGTTTGTCAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTACCTCAAAAAACAACTAGTCAAAATTGAGAATTCAATTATTCGTGGGAAGGAAACTATGAGGACGGCTAAAGAATGGAATAATGGCCACATTTATTTAGCCAT
ATTAAAATTGAGTTGAAAAGTATGCACTCATATTCTTCTATAAATTAAAGCACTATCCCAATGAAACCATACATACAAACAAAAAAAAGCGTACAAACATATATAAGTGA
GAAAGTTATTAGAGAGAATTAAGAAAGCAAAGAATGGAGAGAGGAAGTATTATGATGATTTTGGTGTTGGCTTTGGGGGTTTTTAGCTTGGCAAATGCTCAAAGTGCCAC
TAATGTGAGAGCTACTTATCATTTTTACAACCCACAAAATATCAATTGGGACTATCTTAAAGCAAGTGTTTTTTGTGCAACATGGGATGCTAACAAACCTTTAGAGTGGC
GCCGTCGGTATGGCTGGACTGCCTTCTGCGGTCCTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGGTGTTTGAGGGTGACGAACACTGAAACAGGAGCTTCAGAGATA
GTGAGAATTGTTGATCAATGCTCTAATGGAGGGTTGGATTTGGATGTGAATGTCTTTAGGAGGATTGACACTAATGGAAATGGAAACTCCAAAGGTCATCTTATTGTTAA
CTATCAGTTTGTCAATTGTTGAGATTTCTACTCTAATTTCATTTCATTCTTCTAGAAGAAGAAAGAAAATCATGTTCTAATGAATAAAGTTTGAATAATAAAATATGAAA
TAAAGGTT
Protein sequenceShow/hide protein sequence
MERGSIMMILVLALGVFSLANAQSATNVRATYHFYNPQNINWDYLKASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGG
LDLDVNVFRRIDTNGNGNSKGHLIVNYQFVNC