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CaUC02G042860 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G042860
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCell wall protein
Genome locationCiama_Chr02:30364955..30366584
RNA-Seq ExpressionCaUC02G042860
SyntenyCaUC02G042860
Gene Ontology termsNA
InterPro domainsIPR034565 - Putative cell wall protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065341.1 putative cell wall protein [Cucumis melo var. makuwa]1.8e-3168.47Show/hide
Query:  MAYRTIPSLLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIPN
        MA+R  PSL  IFLVIL +TGEAVAAR+F E                    SVLIPGIGRITLSPYDKGSHGGGH+  YGSNPAP+R+YIPGGDDNFIPN
Subjt:  MAYRTIPSLLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIPN

Query:  PGFEVPIPANI
        PG+EVPIPANI
Subjt:  PGFEVPIPANI

PQQ05090.1 hypothetical protein Pyn_37066 [Prunus yedoensis var. nudiflora]1.6e-1645.54Show/hide
Query:  LLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPY----------DKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFI
        L+ + +V+L ITG+AVA R+   +    DDKKQP+W +G+DG S LIPGIGR+   P           D GS G       G  P+    Y+PGGDD F+
Subjt:  LLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPY----------DKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFI

Query:  PNPGFEVPIPAN
        PNPG+EVP P N
Subjt:  PNPGFEVPIPAN

XP_022140620.1 putative cell wall protein [Momordica charantia]5.7e-3877.68Show/hide
Query:  MAYRTIPSLL-LIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIP
        MAYRTI SLL ++ ++IL + GEA AARN  E+SSI DDKKQPQWLVGYDGVSVLIPGIGRITL PYDKGS  G HAG YGSNPA   +YIPGGDDNFIP
Subjt:  MAYRTIPSLL-LIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIP

Query:  NPGFEVPIPANI
        NPGFEVP PANI
Subjt:  NPGFEVPIPANI

XP_022970746.1 putative cell wall protein [Cucurbita maxima]8.6e-4281.08Show/hide
Query:  MAYRTIPSLLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIPN
        MA RTI SLL  F+VIL I GEAVAARN HERSSI DDKKQP+W+ G+DGVSVLIPGIGR TLSP+DKGS G G AG YGSNPAPRR+YIPGGDDNFIPN
Subjt:  MAYRTIPSLLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIPN

Query:  PGFEVPIPANI
        PGFEVPIPA I
Subjt:  PGFEVPIPANI

XP_034206933.1 putative cell wall protein [Prunus dulcis]1.6e-1646.09Show/hide
Query:  LLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDK-------------GSHGGGHAGLYGSNPAPRRRYIPGGDD
        L+ I +V+L ITG+AVA R+   +    DDKKQP+W +G+DG S LIPGIGR+ + P                GS GG  +   G  P+    Y+PGGDD
Subjt:  LLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDK-------------GSHGGGHAGLYGSNPAPRRRYIPGGDD

Query:  NFIPNPGFEVPIPAN
         F+PNPG+EVPIP N
Subjt:  NFIPNPGFEVPIPAN

TrEMBL top hitse value%identityAlignment
A0A0A0KCX5 Uncharacterized protein1.1e-1855.86Show/hide
Query:  MAYRTIPSLLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIPN
        MA+R IPS+L IFLVIL +TGEAVA                         VSVLIPGIGR+TLS        GGH+  YGSNPAPRR+YIPGGD NFIPN
Subjt:  MAYRTIPSLLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIPN

Query:  PGFEVPIPANI
        PG+EV I A+I
Subjt:  PGFEVPIPANI

A0A314YGG0 Uncharacterized protein7.9e-1745.54Show/hide
Query:  LLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPY----------DKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFI
        L+ + +V+L ITG+AVA R+   +    DDKKQP+W +G+DG S LIPGIGR+   P           D GS G       G  P+    Y+PGGDD F+
Subjt:  LLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPY----------DKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFI

Query:  PNPGFEVPIPAN
        PNPG+EVP P N
Subjt:  PNPGFEVPIPAN

A0A5D3BC54 Putative cell wall protein8.7e-3268.47Show/hide
Query:  MAYRTIPSLLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIPN
        MA+R  PSL  IFLVIL +TGEAVAAR+F E                    SVLIPGIGRITLSPYDKGSHGGGH+  YGSNPAP+R+YIPGGDDNFIPN
Subjt:  MAYRTIPSLLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIPN

Query:  PGFEVPIPANI
        PG+EVPIPANI
Subjt:  PGFEVPIPANI

A0A6J1CFL0 putative cell wall protein2.8e-3877.68Show/hide
Query:  MAYRTIPSLL-LIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIP
        MAYRTI SLL ++ ++IL + GEA AARN  E+SSI DDKKQPQWLVGYDGVSVLIPGIGRITL PYDKGS  G HAG YGSNPA   +YIPGGDDNFIP
Subjt:  MAYRTIPSLL-LIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIP

Query:  NPGFEVPIPANI
        NPGFEVP PANI
Subjt:  NPGFEVPIPANI

A0A6J1I1F6 putative cell wall protein4.1e-4281.08Show/hide
Query:  MAYRTIPSLLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIPN
        MA RTI SLL  F+VIL I GEAVAARN HERSSI DDKKQP+W+ G+DGVSVLIPGIGR TLSP+DKGS G G AG YGSNPAPRR+YIPGGDDNFIPN
Subjt:  MAYRTIPSLLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIPN

Query:  PGFEVPIPANI
        PGFEVPIPA I
Subjt:  PGFEVPIPANI

SwissProt top hitse value%identityAlignment
P47925 Putative cell wall protein4.2e-0732.79Show/hide
Query:  MAYRTIPSLLLIFLVILTI-TGEAVAARNFHERSSIDDDKKQPQWLVGYD-GVSVLIPGIGRITLSPYDKGSH------------GGGHAGLYGSNPAPR
        MA   I S +++ ++ L + + E V+      +S    D K P +LV  +   ++LIPG+GR  L P  K               GGG     G   A  
Subjt:  MAYRTIPSLLLIFLVILTI-TGEAVAARNFHERSSIDDDKKQPQWLVGYD-GVSVLIPGIGRITLSPYDKGSH------------GGGHAGLYGSNPAPR

Query:  RRYIPGGDDNFIPNPGFEVPIP
           +PGGDD  +PNPGFE P P
Subjt:  RRYIPGGDDNFIPNPGFEVPIP

Arabidopsis top hitse value%identityAlignment
AT2G20870.1 cell wall protein precursor, putative3.0e-0832.79Show/hide
Query:  MAYRTIPSLLLIFLVILTI-TGEAVAARNFHERSSIDDDKKQPQWLVGYD-GVSVLIPGIGRITLSPYDKGSH------------GGGHAGLYGSNPAPR
        MA   I S +++ ++ L + + E V+      +S    D K P +LV  +   ++LIPG+GR  L P  K               GGG     G   A  
Subjt:  MAYRTIPSLLLIFLVILTI-TGEAVAARNFHERSSIDDDKKQPQWLVGYD-GVSVLIPGIGRITLSPYDKGSH------------GGGHAGLYGSNPAPR

Query:  RRYIPGGDDNFIPNPGFEVPIP
           +PGGDD  +PNPGFE P P
Subjt:  RRYIPGGDDNFIPNPGFEVPIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTACAGAACCATACCTTCTCTGCTCCTTATCTTCCTCGTGATCCTCACAATAACTGGAGAAGCAGTTGCAGCGCGCAATTTTCACGAAAGGTCGAGCATTGATGA
CGATAAGAAACAGCCTCAGTGGCTGGTTGGATATGATGGGGTCAGTGTGCTCATTCCCGGCATTGGACGGATCACATTGTCACCATATGACAAAGGCAGTCATGGAGGAG
GGCATGCGGGTTTATATGGCAGTAACCCAGCTCCACGACGTCGATATATTCCAGGAGGGGATGATAATTTCATTCCAAATCCTGGATTTGAGGTGCCAATCCCTGCCAAT
ATTGATGAGACATTGTTATCTTTGGCTACCCCGTCAAGCGGCTCCAGTTTCGCCATTATTGAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTACAGAACCATACCTTCTCTGCTCCTTATCTTCCTCGTGATCCTCACAATAACTGGAGAAGCAGTTGCAGCGCGCAATTTTCACGAAAGGTCGAGCATTGATGA
CGATAAGAAACAGCCTCAGTGGCTGGTTGGATATGATGGGGTCAGTGTGCTCATTCCCGGCATTGGACGGATCACATTGTCACCATATGACAAAGGCAGTCATGGAGGAG
GGCATGCGGGTTTATATGGCAGTAACCCAGCTCCACGACGTCGATATATTCCAGGAGGGGATGATAATTTCATTCCAAATCCTGGATTTGAGGTGCCAATCCCTGCCAAT
ATTGATGAGACATTGTTATCTTTGGCTACCCCGTCAAGCGGCTCCAGTTTCGCCATTATTGAAGCTTAG
Protein sequenceShow/hide protein sequence
MAYRTIPSLLLIFLVILTITGEAVAARNFHERSSIDDDKKQPQWLVGYDGVSVLIPGIGRITLSPYDKGSHGGGHAGLYGSNPAPRRRYIPGGDDNFIPNPGFEVPIPAN
IDETLLSLATPSSGSSFAIIEA