; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G042890 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G042890
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionHomeobox leucine-zipper protein
Genome locationCiama_Chr02:30421357..30421671
RNA-Seq ExpressionCaUC02G042890
SyntenyCaUC02G042890
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR009057 - Homeobox-like domain superfamily
IPR044830 - Class III homeodomain-leucine zipper family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041695.1 homeobox-leucine zipper protein REVOLUTA-like [Cucumis melo var. makuwa]3.8e-3795.12Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAMAMAHHRE+GDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR  E+
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

KAG6586021.1 Homeobox-leucine zipper protein REVOLUTA, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3693.9Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAMA AHHRESGDGGI+GHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR  E+
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

XP_008462593.1 PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Cucumis melo]3.8e-3795.12Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAMAMAHHRE+GDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR  E+
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

XP_023536970.1 homeobox-leucine zipper protein REVOLUTA-like [Cucurbita pepo subsp. pepo]3.2e-3693.9Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAMA AHHRESGDGGI+GHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR  E+
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

XP_038894235.1 homeobox-leucine zipper protein REVOLUTA-like isoform X1 [Benincasa hispida]3.8e-3795.12Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANI+PKQIKVWFQNRR  E+
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

TrEMBL top hitse value%identityAlignment
A0A1S3CHC5 homeobox-leucine zipper protein REVOLUTA-like1.9e-3795.12Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAMAMAHHRE+GDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR  E+
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

A0A5A7TJT3 Homeobox-leucine zipper protein REVOLUTA-like1.9e-3795.12Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAMAMAHHRE+GDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR  E+
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

A0A5D3C3C5 Homeobox-leucine zipper protein REVOLUTA-like1.9e-3795.12Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAMAMAHHRE+GDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR  E+
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

A0A6J1DHK3 homeobox-leucine zipper protein REVOLUTA-like2.7e-3692.68Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAMAMAHHRE GDGGINGHLDS+GKYVRYT EQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR  E+
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

A0A6J1I368 homeobox-leucine zipper protein REVOLUTA-like1.6e-3693.9Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAMA AHHRESGDGGI+GHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR  E+
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

SwissProt top hitse value%identityAlignment
A2Z8L4 Homeobox-leucine zipper protein HOX95.4e-2674.39Show/hide
Query:  MAMAMAHHRESGDGGINGHLD----STGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR
        MA A+A    SG  G  G  D     +GKYVRYT EQVEALERVYAECPKPSS RRQQL+RDCPILANIEPKQIKVWFQNRR
Subjt:  MAMAMAHHRESGDGGINGHLD----STGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR

O04291 Homeobox-leucine zipper protein ATHB-143.5e-2574.67Show/hide
Query:  HRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        +RES D G++     +GKYVRYT EQVEALERVY ECPKPSSLRRQQL+R+CPIL+NIEPKQIKVWFQNRR  E+
Subjt:  HRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

O04292 Homeobox-leucine zipper protein ATHB-91.2e-2571.95Show/hide
Query:  MAHH----RESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAHH    R+S D G +     +GKYVRYT EQVEALERVYAECPKPSSLRRQQL+R+CPIL NIEP+QIKVWFQNRR  E+
Subjt:  MAHH----RESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

Q9AV49 Homeobox-leucine zipper protein HOX95.4e-2674.39Show/hide
Query:  MAMAMAHHRESGDGGINGHLD----STGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR
        MA A+A    SG  G  G  D     +GKYVRYT EQVEALERVYAECPKPSS RRQQL+RDCPILANIEPKQIKVWFQNRR
Subjt:  MAMAMAHHRESGDGGINGHLD----STGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR

Q9SE43 Homeobox-leucine zipper protein REVOLUTA7.3e-3180.77Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR
        M MA+A+HRE     +N HLDS+GKYVRYT EQVEALERVYAECPKPSSLRRQQL+R+C ILANIEPKQIKVWFQNRR
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR

Arabidopsis top hitse value%identityAlignment
AT1G30490.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein8.5e-2771.95Show/hide
Query:  MAHH----RESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        MAHH    R+S D G +     +GKYVRYT EQVEALERVYAECPKPSSLRRQQL+R+CPIL NIEP+QIKVWFQNRR  E+
Subjt:  MAHH----RESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

AT1G52150.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein3.0e-2478.46Show/hide
Query:  GHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        G LD+ GKYVRYT EQVEALER+Y +CPKPSS+RRQQL+R+CPIL+NIEPKQIKVWFQNRR  E+
Subjt:  GHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

AT2G34710.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein2.5e-2674.67Show/hide
Query:  HRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        +RES D G++     +GKYVRYT EQVEALERVY ECPKPSSLRRQQL+R+CPIL+NIEPKQIKVWFQNRR  E+
Subjt:  HRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

AT4G32880.1 homeobox gene 89.4e-2673.24Show/hide
Query:  GDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER
        G G  N H    GKYVRYT EQVEALER+Y +CPKPSS+RRQQL+R+CPIL+NIEPKQIKVWFQNRR  E+
Subjt:  GDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLER

AT5G60690.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein5.2e-3280.77Show/hide
Query:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR
        M MA+A+HRE     +N HLDS+GKYVRYT EQVEALERVYAECPKPSSLRRQQL+R+C ILANIEPKQIKVWFQNRR
Subjt:  MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGCTATGGCCCATCACAGGGAGAGCGGCGATGGGGGTATCAATGGCCACCTTGATAGCACTGGGAAGTATGTCCGTTACACGACGGAGCAAGTGGAGGCTCT
TGAGCGAGTCTATGCGGAATGTCCTAAACCAAGCTCTTTGCGCCGTCAGCAGCTGGTTCGTGATTGCCCCATTTTAGCCAACATCGAGCCCAAGCAGATCAAAGTCTGGT
TCCAGAACCGCAGGTATTTGGAACGTGATGGGGTTCTTTTTCTTCTGCTTGTTCTTCTTTTGAAACCATTGATTGAGGGTATTGCCATTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGGCTATGGCCCATCACAGGGAGAGCGGCGATGGGGGTATCAATGGCCACCTTGATAGCACTGGGAAGTATGTCCGTTACACGACGGAGCAAGTGGAGGCTCT
TGAGCGAGTCTATGCGGAATGTCCTAAACCAAGCTCTTTGCGCCGTCAGCAGCTGGTTCGTGATTGCCCCATTTTAGCCAACATCGAGCCCAAGCAGATCAAAGTCTGGT
TCCAGAACCGCAGGTATTTGGAACGTGATGGGGTTCTTTTTCTTCTGCTTGTTCTTCTTTTGAAACCATTGATTGAGGGTATTGCCATTTCTTAG
Protein sequenceShow/hide protein sequence
MAMAMAHHRESGDGGINGHLDSTGKYVRYTTEQVEALERVYAECPKPSSLRRQQLVRDCPILANIEPKQIKVWFQNRRYLERDGVLFLLLVLLLKPLIEGIAIS