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CaUC02G042940 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G042940
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationCiama_Chr02:30472796..30473584
RNA-Seq ExpressionCaUC02G042940
SyntenyCaUC02G042940
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0010375 - stomatal complex patterning (biological process)
GO:2000122 - negative regulation of stomatal complex development (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034925.1 Protein EPIDERMAL PATTERNING FACTOR 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-3375Show/hide
Query:  MKSTKALLLLVAAVLLILLVAP-AMPARQLSTHNNNSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
        M  TKA +L+VA +L+++L  P AMPAR L  H  NS KR+RGETVE+AGSRLPDCSHACGSC+PCRLVMVR+FC+SVEDSE CPLAYKCMCSHKSFPVP
Subjt:  MKSTKALLLLVAAVLLILLVAP-AMPARQLSTHNNNSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
XP_006409026.2 protein EPIDERMAL PATTERNING FACTOR 1 [Eutrema salsugineum]1.0e-2247.24Show/hide
Query:  MLLHPLNFTNSLGIIISKNMKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNNS---------RKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRF
        +LLHP +  +S  I+   +MKS   L+L ++  L  L      P     +H++           +++ R +TV++AGSRLPDCSHACGSCSPCRLVMV F
Subjt:  MLLHPLNFTNSLGIIISKNMKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNNS---------RKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRF

Query:  FCASVEDSEACPLAYKCMCSHKSFPVP
         CAS+E++E CP+AYKCMC++KS+PVP
Subjt:  FCASVEDSEACPLAYKCMCSHKSFPVP
XP_009117463.1 protein EPIDERMAL PATTERNING FACTOR 1 [Brassica rapa]6.7e-2252.94Show/hide
Query:  MKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNN---SRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFP
        MKS   L+L ++  +  +  +   P     +HNN+    +++ R +TV++AGSRLPDCSHACGSCSPCRLVMV F CAS+E++E CP+AYKCMC +KS+P
Subjt:  MKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNN---SRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFP

Query:  VP
        VP
Subjt:  VP
XP_010555134.1 PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Tarenaya hassleriana]6.7e-2251.2Show/hide
Query:  PLNFTNSLGIIISKNMKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNNS------RKRMRG-----ETVEIAGSRLPDCSHACGSCSPCRLVMVRFFC
        PL+ T++L  ++   MKST  LLLL+  VL+ +  +   P    S H + S      R  +RG     +TV++AGSRLPDCSHACGSCSPCRLVMV F C
Subjt:  PLNFTNSLGIIISKNMKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNNS------RKRMRG-----ETVEIAGSRLPDCSHACGSCSPCRLVMVRFFC

Query:  ASVEDSEACPLAYKCMCSHKSFPVP
        AS+E++E CP+AYKCMC++KS+P+P
Subjt:  ASVEDSEACPLAYKCMCSHKSFPVP
XP_022140689.1 protein EPIDERMAL PATTERNING FACTOR 1-like [Momordica charantia]1.1e-2159.8Show/hide
Query:  KNMKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNNSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFC-ASVEDSEACPLAYKCMCSHKSFP
        K+MK      ++V  V++ LLV     AR ++      R   RGETV+IAGSRLPDCSHACG CSPCRLVMVR+ C A+VEDSE CP AYKCMC+ KSFP
Subjt:  KNMKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNNSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFC-ASVEDSEACPLAYKCMCSHKSFP

Query:  VP
        VP
Subjt:  VP
TrEMBL top hitse value%identityAlignment
A0A078FNB7 Epidermal patterning factor-like protein3.3e-2252.94Show/hide
Query:  MKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNN---SRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFP
        MKS   L+L ++  +  +  +   P     +HNN+    +++ R +TV++AGSRLPDCSHACGSCSPCRLVMV F CAS+E++E CP+AYKCMC +KS+P
Subjt:  MKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNN---SRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFP

Query:  VP
        VP
Subjt:  VP
A0A397Y3J3 Epidermal patterning factor-like protein3.3e-2252.94Show/hide
Query:  MKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNN---SRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFP
        MKS   L+L ++  +  +  +   P     +HNN+    +++ R +TV++AGSRLPDCSHACGSCSPCRLVMV F CAS+E++E CP+AYKCMC +KS+P
Subjt:  MKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNN---SRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFP

Query:  VP
        VP
Subjt:  VP
A0A6J1CGD5 Epidermal patterning factor-like protein5.6e-2259.8Show/hide
Query:  KNMKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNNSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFC-ASVEDSEACPLAYKCMCSHKSFP
        K+MK      ++V  V++ LLV     AR ++      R   RGETV+IAGSRLPDCSHACG CSPCRLVMVR+ C A+VEDSE CP AYKCMC+ KSFP
Subjt:  KNMKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNNSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFC-ASVEDSEACPLAYKCMCSHKSFP

Query:  VP
        VP
Subjt:  VP
A0A7I8JFV2 Epidermal patterning factor-like protein2.1e-2164.94Show/hide
Query:  AMPARQLSTHNNNSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
        A P+ + +T     R R   ETV+IAGS LPDCSHACGSCSPCRLVMV F CAS+E++E CP+AYKCMC+ KS+PVP
Subjt:  AMPARQLSTHNNNSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
M4EQS2 Epidermal patterning factor-like protein3.3e-2252.94Show/hide
Query:  MKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNN---SRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFP
        MKS   L+L ++  +  +  +   P     +HNN+    +++ R +TV++AGSRLPDCSHACGSCSPCRLVMV F CAS+E++E CP+AYKCMC +KS+P
Subjt:  MKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNN---SRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFP

Query:  VP
        VP
Subjt:  VP
SwissProt top hitse value%identityAlignment
C4B8C5 EPIDERMAL PATTERNING FACTOR-like protein 72.1e-1053.85Show/hide
Query:  AGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
        +GS +PDCS+ACG C PC+LV++   C++   SEACPL YKC+C  K + VP
Subjt:  AGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
Q8LC53 Protein EPIDERMAL PATTERNING FACTOR 21.4e-0940.54Show/hide
Query:  QLSTHNNNSRKRMRGETVEI--AGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
        Q  TH+     +  G  +E+   GS LPDCS+ACG+CSPC+ VM+ F C+    +E+C + Y+C C  + + VP
Subjt:  QLSTHNNNSRKRMRGETVEI--AGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
Q8S8I4 Protein EPIDERMAL PATTERNING FACTOR 11.3e-2355.34Show/hide
Query:  KALLLLVAAVLLIL--LVAPAMPARQLSTHNN------NSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSF
        K+LLLL   +      L+A  +P     +H++        R+R R +TV++AGSRLPDCSHACGSCSPCRLVMV F CASVE++E CP+AYKCMC++KS+
Subjt:  KALLLLVAAVLLIL--LVAPAMPARQLSTHNN------NSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSF

Query:  PVP
        PVP
Subjt:  PVP
Arabidopsis top hitse value%identityAlignment
AT1G34245.1 Putative membrane lipoprotein9.7e-1140.54Show/hide
Query:  QLSTHNNNSRKRMRGETVEI--AGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
        Q  TH+     +  G  +E+   GS LPDCS+ACG+CSPC+ VM+ F C+    +E+C + Y+C C  + + VP
Subjt:  QLSTHNNNSRKRMRGETVEI--AGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
AT1G71866.1 LOCATED IN: endomembrane system1.5e-1153.85Show/hide
Query:  AGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
        +GS +PDCS+ACG C PC+LV++   C++   SEACPL YKC+C  K + VP
Subjt:  AGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSFPVP
AT2G20875.1 epidermal patterning factor 19.1e-2555.34Show/hide
Query:  KALLLLVAAVLLIL--LVAPAMPARQLSTHNN------NSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSF
        K+LLLL   +      L+A  +P     +H++        R+R R +TV++AGSRLPDCSHACGSCSPCRLVMV F CASVE++E CP+AYKCMC++KS+
Subjt:  KALLLLVAAVLLIL--LVAPAMPARQLSTHNN------NSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMCSHKSF

Query:  PVP
        PVP
Subjt:  PVP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTTCATCCTCTCAATTTCACCAACTCACTTGGGATTATAATTTCCAAAAATATGAAATCCACAAAGGCTTTACTACTTCTGGTCGCTGCTGTACTCCTGATCCT
CCTAGTCGCACCAGCCATGCCCGCCAGACAACTCTCAACTCATAACAATAATAGTCGCAAGCGAATGAGAGGAGAGACGGTGGAAATTGCAGGATCGAGGTTACCAGATT
GTTCTCACGCTTGTGGGTCGTGCTCCCCATGCAGGCTCGTGATGGTTAGGTTCTTTTGTGCTTCGGTTGAAGACTCAGAGGCTTGCCCCTTGGCTTACAAGTGCATGTGC
AGCCATAAATCCTTTCCTGTTCCATGA
mRNA sequenceShow/hide mRNA sequence
GGAACTTGCATCCAATTTCATGTCTATGGAACAATAACTCTGATGCAGAGTAGTATTTCTTCAAAATGAACCCACATTCTCTCATGCAACCCCAATATTATTATTCCATT
GAACCACAAGAAATTCGAGTTTTGCAATCAAAACCCCACACACCATCTTCTTCCTTCTTCATGTGATTCTCTCCAATAAACAAATTAACTAATCCACTTCCATCATCCAT
CCTTTCCTGTGATTTGCTTCAATTCAATATGCATATTTCACCCTCCCCTTCTTTATATATTCCCCTTATATGCTTCTTCATCCTCTCAATTTCACCAACTCACTTGGGAT
TATAATTTCCAAAAATATGAAATCCACAAAGGCTTTACTACTTCTGGTCGCTGCTGTACTCCTGATCCTCCTAGTCGCACCAGCCATGCCCGCCAGACAACTCTCAACTC
ATAACAATAATAGTCGCAAGCGAATGAGAGGAGAGACGGTGGAAATTGCAGGATCGAGGTTACCAGATTGTTCTCACGCTTGTGGGTCGTGCTCCCCATGCAGGCTCGTG
ATGGTTAGGTTCTTTTGTGCTTCGGTTGAAGACTCAGAGGCTTGCCCCTTGGCTTACAAGTGCATGTGCAGCCATAAATCCTTTCCTGTTCCATGATTTAATTTCATTTT
TTT
Protein sequenceShow/hide protein sequence
MLLHPLNFTNSLGIIISKNMKSTKALLLLVAAVLLILLVAPAMPARQLSTHNNNSRKRMRGETVEIAGSRLPDCSHACGSCSPCRLVMVRFFCASVEDSEACPLAYKCMC
SHKSFPVP