; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G042970 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G042970
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionProtochlorophyllide reductase B
Genome locationCiama_Chr02:30505475..30508342
RNA-Seq ExpressionCaUC02G042970
SyntenyCaUC02G042970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN35821.1 unknown [Zea mays]2.8e-0628.74Show/hide
Query:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----
        +VL++QP  G+A RVER +  +R L++ PV+LLHGEHVA  A+L                   +  P     E+ +P   L R +   +    G      
Subjt:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----

Query:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK
                       Q  +EEV +V+ ++        E    C   VD  +A + V+RHA A EA+++LP+ V+
Subjt:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK

ACR36811.1 unknown [Zea mays]2.8e-0628.74Show/hide
Query:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----
        +VL++QP  G+A RVER +  +R L++ PV+LLHGEHVA  A+L                   +  P     E+ +P   L R +   +    G      
Subjt:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----

Query:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK
                       Q  +EEV +V+ ++        E    C   VD  +A + V+RHA A EA+++LP+ V+
Subjt:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK

ACR38476.1 unknown [Zea mays]2.8e-0628.74Show/hide
Query:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----
        +VL++QP  G+A RVER +  +R L++ PV+LLHGEHVA  A+L                   +  P     E+ +P   L R +   +    G      
Subjt:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----

Query:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK
                       Q  +EEV +V+ ++        E    C   VD  +A + V+RHA A EA+++LP+ V+
Subjt:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK

GER53893.1 trigger factor [Striga asiatica]3.1e-0546.99Show/hide
Query:  YTVKKFLHAIIMCHFPVSARALAVARPSPEEAPVIITFPFLNVLFPSSGAWLISETVA-----VWALTAPTENGTPERPVSFR
        + ++K   A++ CH P+SARALAVARP P+EAPVIIT PF  V  P     +I   VA       ALT  +E+  P+R  SFR
Subjt:  YTVKKFLHAIIMCHFPVSARALAVARPSPEEAPVIITFPFLNVLFPSSGAWLISETVA-----VWALTAPTENGTPERPVSFR

KAF1896447.1 hypothetical protein Lal_00034145 [Lupinus albus]1.4e-2140.5Show/hide
Query:  GNVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILAFAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGTFPANQPCEEEVTKVISSNT
        GNVL +Q CCGNATRV+  K    FLM               ++ A APS  PPSIM E+F PFKP A PL+SP+                     SS+ 
Subjt:  GNVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILAFAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGTFPANQPCEEEVTKVISSNT

Query:  KFKPFSSESWFLCS-RQVDSSIAYKHVKRHARAAEAINKLPYTVKKFLHAIIMCHFPVSARALAVARPSPEEAPVIITFPFLNVLFPSSGAWLISETVAV
        + +      WF+ +     S++ +        AA A+      ++K L AII CHFPVSARALA ARP+PEEAPV  T PFL V  P SGA  +   V V
Subjt:  KFKPFSSESWFLCS-RQVDSSIAYKHVKRHARAAEAINKLPYTVKKFLHAIIMCHFPVSARALAVARPSPEEAPVIITFPFLNVLFPSSGAWLISETVAV

TrEMBL top hitse value%identityAlignment
A0A0A9IE60 Protochlorophyllide reductase B2.3e-0667.44Show/hide
Query:  AILAFAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGTFPAN
        ++ AFAPSNSPPSI+ +   PF P A P RSP+FAFGGTFPAN
Subjt:  AILAFAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGTFPAN

A0A6A5PF86 Uncharacterized protein6.7e-2240.5Show/hide
Query:  GNVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILAFAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGTFPANQPCEEEVTKVISSNT
        GNVL +Q CCGNATRV+  K    FLM               ++ A APS  PPSIM E+F PFKP A PL+SP+                     SS+ 
Subjt:  GNVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILAFAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGTFPANQPCEEEVTKVISSNT

Query:  KFKPFSSESWFLCS-RQVDSSIAYKHVKRHARAAEAINKLPYTVKKFLHAIIMCHFPVSARALAVARPSPEEAPVIITFPFLNVLFPSSGAWLISETVAV
        + +      WF+ +     S++ +        AA A+      ++K L AII CHFPVSARALA ARP+PEEAPV  T PFL V  P SGA  +   V V
Subjt:  KFKPFSSESWFLCS-RQVDSSIAYKHVKRHARAAEAINKLPYTVKKFLHAIIMCHFPVSARALAVARPSPEEAPVIITFPFLNVLFPSSGAWLISETVAV

C0PKV5 Uncharacterized protein1.4e-0628.74Show/hide
Query:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----
        +VL++QP  G+A RVER +  +R L++ PV+LLHGEHVA  A+L                   +  P     E+ +P   L R +   +    G      
Subjt:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----

Query:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK
                       Q  +EEV +V+ ++        E    C   VD  +A + V+RHA A EA+++LP+ V+
Subjt:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK

C4J6L1 Uncharacterized protein1.4e-0628.74Show/hide
Query:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----
        +VL++QP  G+A RVER +  +R L++ PV+LLHGEHVA  A+L                   +  P     E+ +P   L R +   +    G      
Subjt:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----

Query:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK
                       Q  +EEV +V+ ++        E    C   VD  +A + V+RHA A EA+++LP+ V+
Subjt:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK

C4JBC6 Uncharacterized protein1.4e-0628.74Show/hide
Query:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----
        +VL++QP  G+A RVER +  +R L++ PV+LLHGEHVA  A+L                   +  P     E+ +P   L R +   +    G      
Subjt:  NVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAILA---------------FAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGT-----

Query:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK
                       Q  +EEV +V+ ++        E    C   VD  +A + V+RHA A EA+++LP+ V+
Subjt:  -----------FPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTGATTTTTGGGGATACTACAAATTTGAACATGCAGCATGGTACTGACGAGAATCAGAAGGAGACTGTGGACGACTCCCATCAGGACACTGAAGCAATCTTGAA
AAGAGTAGTTAAGGCATTTTCTCAGGACATGACTGACCTGTGCAAGTCTTTTCCCAGCTTCTTCTTCAGATACATAGCCCTTGGTAATGGGAACGTGCTCTCTAAACAAC
CCTGTTGTGGCAATGCAACCAGGGTAGAGAGAAGCAAAAGCTATTCCCGTTTCCTCATGATATCTCCTGTGGAGCTCTTGCATGGTGAGCATGTTGCATACTTTGCTATC
CTTGCCTTTGCTCCATCAAATTCTCCTCCATCTATCATGGTTGAGCTGTTCAGACCATTCAAACCACTTGCTAGGCCTCTCAGATCACCCAAGTTTGCTTTTGGGGGCAC
ATTCCCAGCCAACCAGCCGTGTGAGGAGGAAGTGACCAAGGTGATTAGTTCCAACACTAAGTTCAAACCCTTCAGCAGTGAAAGTTGGTTCCTTTGCAGTCGGCAAGTAG
ACAGCAGCATTGCATACAAGCACGTCAAGAGGCATGCCCGAGCGGCGGAAGCTATCAACAAATTGCCTTACACTGTCAAGAAGTTCCTGCATGCCATAATTATGTGCCAT
TTTCCTGTTTCAGCTAGAGCTTTGGCCGTGGCTAGACCCAGTCCTGAAGAAGCTCCTGTGATTATAACATTTCCTTTCCTCAACGTTTTGTTTCCTTCCAGTGGCGCCTG
GTTGATTTCTGAAACTGTTGCAGTCTGGGCTCTAACAGCTCCAACAGAAAATGGAACTCCTGAGAGGCCAGTGTCCTTCAGAACGACAACGGAAGTCGTGGGAGAAAAAG
AGGCTGCTTGTAGAGCCATGAGATCACTTGAAATGCTCGCAAGAGCAATTATGGAATGGAAGGAGCTGAAATACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGTGATTTTTGGGGATACTACAAATTTGAACATGCAGCATGGTACTGACGAGAATCAGAAGGAGACTGTGGACGACTCCCATCAGGACACTGAAGCAATCTTGAA
AAGAGTAGTTAAGGCATTTTCTCAGGACATGACTGACCTGTGCAAGTCTTTTCCCAGCTTCTTCTTCAGATACATAGCCCTTGGTAATGGGAACGTGCTCTCTAAACAAC
CCTGTTGTGGCAATGCAACCAGGGTAGAGAGAAGCAAAAGCTATTCCCGTTTCCTCATGATATCTCCTGTGGAGCTCTTGCATGGTGAGCATGTTGCATACTTTGCTATC
CTTGCCTTTGCTCCATCAAATTCTCCTCCATCTATCATGGTTGAGCTGTTCAGACCATTCAAACCACTTGCTAGGCCTCTCAGATCACCCAAGTTTGCTTTTGGGGGCAC
ATTCCCAGCCAACCAGCCGTGTGAGGAGGAAGTGACCAAGGTGATTAGTTCCAACACTAAGTTCAAACCCTTCAGCAGTGAAAGTTGGTTCCTTTGCAGTCGGCAAGTAG
ACAGCAGCATTGCATACAAGCACGTCAAGAGGCATGCCCGAGCGGCGGAAGCTATCAACAAATTGCCTTACACTGTCAAGAAGTTCCTGCATGCCATAATTATGTGCCAT
TTTCCTGTTTCAGCTAGAGCTTTGGCCGTGGCTAGACCCAGTCCTGAAGAAGCTCCTGTGATTATAACATTTCCTTTCCTCAACGTTTTGTTTCCTTCCAGTGGCGCCTG
GTTGATTTCTGAAACTGTTGCAGTCTGGGCTCTAACAGCTCCAACAGAAAATGGAACTCCTGAGAGGCCAGTGTCCTTCAGAACGACAACGGAAGTCGTGGGAGAAAAAG
AGGCTGCTTGTAGAGCCATGAGATCACTTGAAATGCTCGCAAGAGCAATTATGGAATGGAAGGAGCTGAAATACTAG
Protein sequenceShow/hide protein sequence
MLVIFGDTTNLNMQHGTDENQKETVDDSHQDTEAILKRVVKAFSQDMTDLCKSFPSFFFRYIALGNGNVLSKQPCCGNATRVERSKSYSRFLMISPVELLHGEHVAYFAI
LAFAPSNSPPSIMVELFRPFKPLARPLRSPKFAFGGTFPANQPCEEEVTKVISSNTKFKPFSSESWFLCSRQVDSSIAYKHVKRHARAAEAINKLPYTVKKFLHAIIMCH
FPVSARALAVARPSPEEAPVIITFPFLNVLFPSSGAWLISETVAVWALTAPTENGTPERPVSFRTTTEVVGEKEAACRAMRSLEMLARAIMEWKELKY