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CaUC02G043120 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G043120
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionMannan endo-1,4-beta-mannosidase
Genome locationCiama_Chr02:30629082..30629543
RNA-Seq ExpressionCaUC02G043120
SyntenyCaUC02G043120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646853.1 hypothetical protein Csa_020628 [Cucumis sativus]5.8e-3469.23Show/hide
Query:  KSSQKEGRRKEPS-LRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTA--VAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAE
        K+SQKE R KEPS   PK WPL LLLLGCT G ILF  V QN    S+ SVVVVGGL+V  A  VAVAVAVIG A LVTWITV+V L L+GRSRRRLVAE
Subjt:  KSSQKEGRRKEPS-LRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTA--VAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAE

Query:  GRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLL
        GRKISK++MVGF+V+VLLKE NVLGAISAA  GYL    G ++
Subjt:  GRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLL

XP_022947668.1 uncharacterized protein LOC111451463 [Cucurbita moschata]2.3e-2257.34Show/hide
Query:  EGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDI
        EG RK P  RP+LW  A   LGC  GV+ F LV          ++VVVGGLLV  A+A       AAA+VTWITV+V L L+GRSRRR+VAEGRKISK+I
Subjt:  EGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDI

Query:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF
        MVG VVKVLLKE  VLG +  A L  LA AWGP   LPI +Y+
Subjt:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF

XP_022970724.1 uncharacterized protein LOC111469624 [Cucurbita maxima]1.1e-2458.22Show/hide
Query:  SQKEGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKIS
        +Q EG RK P  RP+LW  A   LGC  GV+ F LV          S+VVVGGLLV  A+A       AAA+VTWITV+VLL L+GRSRRR+VAEGRKIS
Subjt:  SQKEGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKIS

Query:  KDIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF
        K+IMVG VVKVLLKE  VLG +  A LG LA AWGP   LP+ +Y+
Subjt:  KDIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF

XP_023534045.1 uncharacterized protein LOC111795714 [Cucurbita pepo subsp. pepo]6.1e-2357.34Show/hide
Query:  EGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDI
        EG RK P   P+LW  A   LGC  GV+ F LV          ++VVVGGLLVS A+A       AAA+VTWITV+V L L+GRSR+R+VAEGRKISK+I
Subjt:  EGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDI

Query:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF
        MVG VVKVLLKE  VLG +  A LG LA AWGP   LPI +Y+
Subjt:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF

XP_038902352.1 uncharacterized protein LOC120088986 [Benincasa hispida]4.6e-4782.01Show/hide
Query:  EPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFV
        EPSLRPKLWPLALLLLG TSG ILF LV QNG SS+TT+VV++GGLL+S AVAVAV    A ALVTWITVMVLLSL+GR+RRRLVAEG+KISK+IMVGFV
Subjt:  EPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFV

Query:  VKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYFG
        VKVLLKE NV+GAISAA LGYLAFAWGPLLF P PNYFG
Subjt:  VKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYFG

TrEMBL top hitse value%identityAlignment
A0A0A0KE95 Uncharacterized protein2.8e-3469.23Show/hide
Query:  KSSQKEGRRKEPS-LRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTA--VAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAE
        K+SQKE R KEPS   PK WPL LLLLGCT G ILF  V QN    S+ SVVVVGGL+V  A  VAVAVAVIG A LVTWITV+V L L+GRSRRRLVAE
Subjt:  KSSQKEGRRKEPS-LRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTA--VAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAE

Query:  GRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLL
        GRKISK++MVGF+V+VLLKE NVLGAISAA  GYL    G ++
Subjt:  GRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLL

A0A6J1G791 uncharacterized protein LOC1114514631.1e-2257.34Show/hide
Query:  EGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDI
        EG RK P  RP+LW  A   LGC  GV+ F LV          ++VVVGGLLV  A+A       AAA+VTWITV+V L L+GRSRRR+VAEGRKISK+I
Subjt:  EGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDI

Query:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF
        MVG VVKVLLKE  VLG +  A L  LA AWGP   LPI +Y+
Subjt:  MVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF

A0A6J1I6G7 uncharacterized protein LOC1114696245.3e-2558.22Show/hide
Query:  SQKEGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKIS
        +Q EG RK P  RP+LW  A   LGC  GV+ F LV          S+VVVGGLLV  A+A       AAA+VTWITV+VLL L+GRSRRR+VAEGRKIS
Subjt:  SQKEGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKIS

Query:  KDIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF
        K+IMVG VVKVLLKE  VLG +  A LG LA AWGP   LP+ +Y+
Subjt:  KDIMVGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYF

A0A7J7CEJ2 Uncharacterized protein2.0e-0844.54Show/hide
Query:  LLLGCTSGVILFSLVW---QNGSSSSTT------SVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVL
        ++L C+   I F L W   Q+  SSS++      + V++GG+    ++  A+AV   A LV WITV+VLL+  G+ RR LV EGRKI+++I VGFV+K+L
Subjt:  LLLGCTSGVILFSLVW---QNGSSSSTT------SVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVL

Query:  LKEANVLGAISAAFLGYLA
        LKE N++ A+  A LGY A
Subjt:  LKEANVLGAISAAFLGYLA

A0A7J7DCH0 Uncharacterized protein2.7e-0844.54Show/hide
Query:  LLLGCTSGVILFSLVW---QNGSSSSTT------SVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVL
        ++L C+   + F L W   Q+ +SSS++      + V++GG+    ++  A+AV   A LV WITV+VLL+ +G+ R  LV EGRKI+K+I VGFV+K+L
Subjt:  LLLGCTSGVILFSLVW---QNGSSSSTT------SVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVL

Query:  LKEANVLGAISAAFLGYLA
        LKE NV+ A+  A LGY+A
Subjt:  LKEANVLGAISAAFLGYLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G03730.1 unknown protein2.0e-0848.15Show/hide
Query:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGY
        VV+G +  + ++  A AV   A +V WI+V+VLL+  G+SRR LV E RKI++++  GFV KVLLKE N + A+  A LGY
Subjt:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGY

AT4G03600.1 unknown protein4.1e-0947.56Show/hide
Query:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYL
        VV+G +  + ++  A+ V   A +V WI+V+VLL+  G+SRR LV EGRKI++++ VGFV KVLLKE NV+ A  A    +L
Subjt:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYL

AT4G28330.1 unknown protein8.5e-0741.67Show/hide
Query:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLAF
        V++G +    ++A A+ +   A +V WI+V+V ++  G+SR+R+V EGRK++K+I  GFV +VLLKE N + A+  A L Y  F
Subjt:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLAF

AT4G28340.1 unknown protein7.9e-0538.1Show/hide
Query:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLAF
        V++G +    ++A A+ +   A +V WI+V+V ++   +SR+++V EGRK++K+I  G+V KVLLKE N + A+  A + Y  F
Subjt:  VVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIMVGFVVKVLLKEANVLGAISAAFLGYLAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTAGACAAATCAAGCCAGAAGGAAGGAAGAAGAAAGGAGCCATCTTTGAGACCAAAACTATGGCCTCTAGCTCTACTACTCTTGGGCTGTACTTCTGGTGTCAT
TCTATTTAGTTTGGTGTGGCAAAATGGCAGTAGTAGTAGTACTACTAGCGTGGTTGTGGTTGGTGGTTTGTTGGTTTCGACAGCGGTGGCAGTAGCGGTGGCGGTTATTG
GTGCGGCGGCTTTGGTGACGTGGATCACAGTTATGGTGTTGTTATCCTTGGTTGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGATATAATG
GTGGGGTTTGTGGTGAAGGTTTTGTTGAAGGAAGCCAATGTTTTGGGTGCTATTTCGGCTGCTTTTTTGGGCTACTTGGCCTTTGCTTGGGGTCCATTATTGTTCCTTCC
TATTCCAAATTATTTTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTAGACAAATCAAGCCAGAAGGAAGGAAGAAGAAAGGAGCCATCTTTGAGACCAAAACTATGGCCTCTAGCTCTACTACTCTTGGGCTGTACTTCTGGTGTCAT
TCTATTTAGTTTGGTGTGGCAAAATGGCAGTAGTAGTAGTACTACTAGCGTGGTTGTGGTTGGTGGTTTGTTGGTTTCGACAGCGGTGGCAGTAGCGGTGGCGGTTATTG
GTGCGGCGGCTTTGGTGACGTGGATCACAGTTATGGTGTTGTTATCCTTGGTTGGGAGGTCGAGAAGGAGGTTGGTGGCGGAGGGGAGGAAGATTAGTAAAGATATAATG
GTGGGGTTTGTGGTGAAGGTTTTGTTGAAGGAAGCCAATGTTTTGGGTGCTATTTCGGCTGCTTTTTTGGGCTACTTGGCCTTTGCTTGGGGTCCATTATTGTTCCTTCC
TATTCCAAATTATTTTGGTTGA
Protein sequenceShow/hide protein sequence
MAVDKSSQKEGRRKEPSLRPKLWPLALLLLGCTSGVILFSLVWQNGSSSSTTSVVVVGGLLVSTAVAVAVAVIGAAALVTWITVMVLLSLVGRSRRRLVAEGRKISKDIM
VGFVVKVLLKEANVLGAISAAFLGYLAFAWGPLLFLPIPNYFG