| GenBank top hits | e value | %identity | Alignment |
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| TYJ98274.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa] | 2.2e-109 | 89.54 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
YEAKM+DIEKNESKAADRIKQSY KENARKQSRQIQICSKVPPSSNKRSFGG+GYGYNVANTKNKILKKAKIEVLQS QEMKNIKAWR
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
Query: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
RNAVQKSSDI STKK MF GRESASTSKN TS+HMA+RW
Subjt: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
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| XP_004143189.1 transcription elongation factor B polypeptide 3 isoform X1 [Cucumis sativus] | 3.1e-111 | 91.21 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
YEAKM+DIEKNESKAADRIKQSY KENARKQSRQIQICSKVPPSSNKRSFGG+GYGYNVANTKNKILKKAKIEVLQS QEMKNIKAWR
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
Query: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
RNAVQKSSDISSTKK MFSGRESASTSKN TS+HMA+RW
Subjt: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
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| XP_008456387.2 PREDICTED: transcription elongation factor B polypeptide 3 isoform X1 [Cucumis melo] | 4.2e-108 | 89.5 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
YEAKM+DIEKNESKAADRIKQSY KENARKQSRQIQICSKVPPSSNKRSFGG+GYGYNVANTKNKILKKAKIEVLQS QEMKNIKAWR
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
Query: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARR
RNAVQKSSDI STKK MF GRESASTSKN TS+HMA+R
Subjt: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARR
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| XP_016901950.1 PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo] | 4.2e-108 | 89.5 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
YEAKM+DIEKNESKAADRIKQSY KENARKQSRQIQICSKVPPSSNKRSFGG+GYGYNVANTKNKILKKAKIEVLQS QEMKNIKAWR
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
Query: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARR
RNAVQKSSDI STKK MF GRESASTSKN TS+HMA+R
Subjt: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARR
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| XP_038900478.1 transcription elongation factor B polypeptide 3-like isoform X1 [Benincasa hispida] | 4.5e-110 | 91.21 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGG+ YGYNVANTKNKILKKAKIEVLQS QEMKNIKAWR
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
Query: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
RNAVQKSSDI STKK MFSGRESASTSKN TS+ MA+RW
Subjt: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C4D6 transcription elongation factor B polypeptide 3 isoform X1 | 2.0e-108 | 89.5 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
YEAKM+DIEKNESKAADRIKQSY KENARKQSRQIQICSKVPPSSNKRSFGG+GYGYNVANTKNKILKKAKIEVLQS QEMKNIKAWR
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
Query: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARR
RNAVQKSSDI STKK MF GRESASTSKN TS+HMA+R
Subjt: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARR
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| A0A1S4E1U0 transcription elongation factor B polypeptide 3 isoform X2 | 2.0e-108 | 89.5 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
YEAKM+DIEKNESKAADRIKQSY KENARKQSRQIQICSKVPPSSNKRSFGG+GYGYNVANTKNKILKKAKIEVLQS QEMKNIKAWR
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
Query: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARR
RNAVQKSSDI STKK MF GRESASTSKN TS+HMA+R
Subjt: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARR
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| A0A5D3BGR1 Transcription elongation factor B polypeptide 3 isoform X2 | 1.1e-109 | 89.54 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
YEAKM+DIEKNESKAADRIKQSY KENARKQSRQIQICSKVPPSSNKRSFGG+GYGYNVANTKNKILKKAKIEVLQS QEMKNIKAWR
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
Query: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
RNAVQKSSDI STKK MF GRESASTSKN TS+HMA+RW
Subjt: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
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| A0A6J1G8W9 transcription elongation factor B polypeptide 3 isoform X1 | 1.3e-99 | 81.17 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MY VRK+PSLVDLCV KAIDNLRFLGDVGETD+HLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFG+E+T V ERM++K+VAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
YEAKMKDIEKNES+AADRIKQSY KENARKQSRQIQICSKVPP+SNKRSFG GYG NV NTKNK+LKK+KIEVLQS QEMKNIKAWR
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
Query: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
RNAVQK+ DI STKK MFSGR+SASTSK+TT +HMAR+W
Subjt: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
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| A0A6J1I1I3 transcription elongation factor B polypeptide 3 isoform X1 | 6.0e-100 | 81.59 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
MY VRK+PSLVDLCV KAIDNLRFLGDVGETD+HLL+RILPHCTVDQLMHVEKSSEGRDLTP+TDKLWKKFYERQFG+EST V ERM++K+VAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
YEAKMKDIEKNES+AADRIKQSY KENARKQSRQIQICSKVPP+SNKRSFG GYG NV NTKNK+LKK+KIEVLQS QEMKNIKAWR
Subjt: YEAKMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSFGGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWR
Query: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
RNAVQK+ DI STKK MFSGR+SASTSK+TT +HMAR+W
Subjt: RNAVQKSSDISSTKKSMFSGRESASTSKNTTSSHMARRW
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G42780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | 2.6e-47 | 45.81 | Show/hide |
Query: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LL++IL HCT++QL H+E +++ DL+PITDK WK FY++ +G+E +IE + +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
Query: KMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWRRN
K+ +++ E + R+K+ Y+ EN RKQSRQ ++CSK PPS KR F G + GYN+ + K+ I+KKAKI++L+S QE+KN+ A +RN
Subjt: KMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWRRN
Query: AVQKSSDISSTKKSMFSGRESASTSKN
+QKS IS+ KK+ S S STS++
Subjt: AVQKSSDISSTKKSMFSGRESASTSKN
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| AT2G42780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). | 9.9e-47 | 44.78 | Show/hide |
Query: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LL++IL HCT++QL H+E +++ DL+PITDK WK FY++ +G+E +IE + +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLDRILPHCTVDQLMHVEKSSEGRDLTPITDKLWKKFYERQFGKESTTTVIERMRQKRV-AFRWIQLYEA
Query: KMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWRRN
K+ +++ E + R+K+ Y+ EN RKQSRQ ++CSK PPS KR F G + GYN+ + K+ I+KKAKI++L+S QE+KN+ A +RN
Subjt: KMKDIEKNESKAADRIKQSYQKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGYNVANTKNKILKKAKIEVLQSLLPLAYLEALPKIQEMKNIKAWRRN
Query: AVQKSSDISSTKKSMFSGRESASTSKNTTS
+QKS IS+ K++ S + STS++ S
Subjt: AVQKSSDISSTKKSMFSGRESASTSKNTTS
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