; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G044040 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G044040
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptioncyclin-T1-3-like
Genome locationCiama_Chr02:31776718..31782175
RNA-Seq ExpressionCaUC02G044040
SyntenyCaUC02G044040
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0007049 - cell cycle (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0051301 - cell division (biological process)
GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
InterPro domainsIPR006671 - Cyclin, N-terminal
IPR013763 - Cyclin-like
IPR036915 - Cyclin-like superfamily
IPR043198 - Cyclin/Cyclin-like subunit Ssn8


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456310.1 PREDICTED: LOW QUALITY PROTEIN: cyclin-T1-3-like [Cucumis melo]1.9e-5195.41Show/hide
Query:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
        MHMENLSSSDPSH AMYENSD+KHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
Subjt:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA

Query:  KNDRRKPTT
        KNDRR   T
Subjt:  KNDRRKPTT

XP_011656978.1 cyclin-T1-3 [Cucumis sativus]1.9e-5195.41Show/hide
Query:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
        MHMENLSSSDPSH AMYENSD+KHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
Subjt:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA

Query:  KNDRRKPTT
        KNDRR   T
Subjt:  KNDRRKPTT

XP_022149673.1 cyclin-T1-3-like isoform X2 [Momordica charantia]3.0e-4991.74Show/hide
Query:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
        MHMENLSSSDP H A YENSD+KHSQDGLEDGSRWYFSRKELEE+SPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSH 
Subjt:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA

Query:  KNDRRKPTT
        KNDRR   T
Subjt:  KNDRRKPTT

XP_038901559.1 cyclin-T1-3-like isoform X1 [Benincasa hispida]1.4e-5195.41Show/hide
Query:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
        MHMENLSSSDPSHQ MYENSD+KHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
Subjt:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA

Query:  KNDRRKPTT
        KNDRR   T
Subjt:  KNDRRKPTT

XP_038901562.1 cyclin-T1-3-like isoform X3 [Benincasa hispida]1.4e-5195.41Show/hide
Query:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
        MHMENLSSSDPSHQ MYENSD+KHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
Subjt:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA

Query:  KNDRRKPTT
        KNDRR   T
Subjt:  KNDRRKPTT

TrEMBL top hitse value%identityAlignment
A0A0A0KD81 Uncharacterized protein9.0e-5295.41Show/hide
Query:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
        MHMENLSSSDPSH AMYENSD+KHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
Subjt:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA

Query:  KNDRRKPTT
        KNDRR   T
Subjt:  KNDRRKPTT

A0A1S3C474 LOW QUALITY PROTEIN: cyclin-T1-3-like9.0e-5295.41Show/hide
Query:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
        MHMENLSSSDPSH AMYENSD+KHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
Subjt:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA

Query:  KNDRRKPTT
        KNDRR   T
Subjt:  KNDRRKPTT

A0A6J1D7E6 cyclin-T1-3-like isoform X21.4e-4991.74Show/hide
Query:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
        MHMENLSSSDP H A YENSD+KHSQDGLEDGSRWYFSRKELEE+SPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSH 
Subjt:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA

Query:  KNDRRKPTT
        KNDRR   T
Subjt:  KNDRRKPTT

A0A6J1D8M6 cyclin-T1-3-like isoform X11.4e-4991.74Show/hide
Query:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
        MHMENLSSSDP H A YENSD+KHSQDGLEDGSRWYFSRKELEE+SPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSH 
Subjt:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA

Query:  KNDRRKPTT
        KNDRR   T
Subjt:  KNDRRKPTT

A0A6J1G7W8 cyclin-T1-3-like isoform X11.9e-4990.83Show/hide
Query:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
        MHMENLSS++PSHQA+YENSD+K SQDGLEDGSRWYFSRKELEE+SPS+QDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA
Subjt:  MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHA

Query:  KNDRRKPTT
        KNDRR   T
Subjt:  KNDRRKPTT

SwissProt top hitse value%identityAlignment
Q2QQS5 Cyclin-T1-42.5e-3571.43Show/hide
Query:  SDPSHQAMYENSDAKHSQDGLED----GSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDR
        SD SH  + ENS  + +Q   E+    G+ WYFSRKE+EE SPS++DGIDLKKE+YLRKSYCTFLQDLGMRLKVPQVTIATAI+FCHRF+LRQSHAKNDR
Subjt:  SDPSHQAMYENSDAKHSQDGLED----GSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDR

Query:  RKPTT
        R   T
Subjt:  RKPTT

Q2RAC5 Cyclin-T1-34.3e-3568.47Show/hide
Query:  MENLSSSDPSHQAMYENSDAKHSQD----GLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQS
        M+ + +SD SH  + ENS  +   D    G + G+ WYFSRKE+EE S S++DGIDLKKE+YLRKSYCTFLQDLGMRLKVPQVTIATAI+FCHRFFLRQS
Subjt:  MENLSSSDPSHQAMYENSDAKHSQD----GLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQS

Query:  HAKNDRRKPTT
        HAKNDRR   T
Subjt:  HAKNDRRKPTT

Q56YF8 Cyclin-T1-22.8e-2663Show/hide
Query:  SHQAMYENSDAKHSQDGLEDGS--RWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRKPTT
        +  A    SDA      L D     W+FSR+E+E  SPS++DGIDLK ET LR SYCTFL+ LG RLKVPQVTIATAI FCHRFFLRQSHAKNDR+   T
Subjt:  SHQAMYENSDAKHSQDGLEDGS--RWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRKPTT

Q8GYM6 Cyclin-T1-43.4e-3265.42Show/hide
Query:  MENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKN
        M  + + D S      +S +++S +  ++ +RWYF RKE+EE SPS+ D IDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF+RQSHA+N
Subjt:  MENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKN

Query:  DRRKPTT
        DRR   T
Subjt:  DRRKPTT

Q9FKE6 Cyclin-T1-54.8e-3468.22Show/hide
Query:  MENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKN
        M  + + + S+     +S +++S +  E+ SRWYF RKE+EE SPS+ DGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF RQSHAKN
Subjt:  MENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKN

Query:  DRRKPTT
        DRR   T
Subjt:  DRRKPTT

Arabidopsis top hitse value%identityAlignment
AT1G27630.1 cyclin T 1;34.9e-2670.42Show/hide
Query:  SRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKND
        S+WYFSR+E+E FSPS++DGIDL KE++LR SYCTFLQ LGM+L V QVTI+ A++ CHRF++RQSHAKND
Subjt:  SRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKND

AT4G19560.1 Cyclin family protein2.0e-2763Show/hide
Query:  SHQAMYENSDAKHSQDGLEDGS--RWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRKPTT
        +  A    SDA      L D     W+FSR+E+E  SPS++DGIDLK ET LR SYCTFL+ LG RLKVPQVTIATAI FCHRFFLRQSHAKNDR+   T
Subjt:  SHQAMYENSDAKHSQDGLEDGS--RWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRKPTT

AT4G19600.1 Cyclin family protein2.4e-3365.42Show/hide
Query:  MENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKN
        M  + + D S      +S +++S +  ++ +RWYF RKE+EE SPS+ D IDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF+RQSHA+N
Subjt:  MENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKN

Query:  DRRKPTT
        DRR   T
Subjt:  DRRKPTT

AT5G45190.1 Cyclin family protein3.4e-3568.22Show/hide
Query:  MENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKN
        M  + + + S+     +S +++S +  E+ SRWYF RKE+EE SPS+ DGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF RQSHAKN
Subjt:  MENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKN

Query:  DRRKPTT
        DRR   T
Subjt:  DRRKPTT

AT5G45190.2 Cyclin family protein8.7e-3159.32Show/hide
Query:  MENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKV-----------PQVTIATAIIFCH
        M  + + + S+     +S +++S +  E+ SRWYF RKE+EE SPS+ DGIDLKKETYLRKSYCTFLQDLGMRLK+             VTIATAIIFCH
Subjt:  MENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKV-----------PQVTIATAIIFCH

Query:  RFFLRQSHAKNDRRKPTT
        RFF RQSHAKNDRR   T
Subjt:  RFFLRQSHAKNDRRKPTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATATGGAGAATTTATCATCTAGTGATCCATCACATCAAGCGATGTATGAAAATAGTGATGCAAAGCACTCACAGGATGGGTTGGAGGATGGCTCTCGATGGTATTT
TTCTAGGAAGGAATTAGAAGAATTCTCACCTTCTAAACAAGATGGGATTGACTTGAAGAAGGAGACATATTTACGCAAATCATACTGTACATTTCTCCAAGATTTGGGAA
TGAGACTTAAAGTTCCCCAGGTAACCATTGCTACAGCTATAATTTTTTGCCATAGGTTCTTTCTACGGCAGTCTCATGCAAAGAATGACCGAAGGAAACCGACGACGGCA
CCTCAAACATTTGGCGAATTGTTGCTGATGAGCGGTGGTGCAAAGTGCGCACGACGAGCGACAACCCAACTCGCGAGACGGCTATTGGCGAGATCCGGCGGCGGCGTGGC
TGGTCGTAGTGATGGGAGCGCAACGTCGAGCAGTTGA
mRNA sequenceShow/hide mRNA sequence
GTCATCATTAATTATTTTTGTTTTTGGAGGGTTCGTCCCATCGTACGAAAGAAAGGAAAAGCAGCGTGAAGATGGCGAGCCTCGAACTCGAACTCGAAGCACCAACAAAA
TTCATCAGCTTACCTCACTCTCCACTGCTTTTCATTCTTTCTTCCTCATAAACCCTAACCCTCCATTGCCAAATTTTTCTTCTTTTTCTTCTTTTTCTTCTGGGCATTTT
CATCAGCCCTCATTTTCCCTCCCTTAATTTATCTCCGTCCAGTCCAGCAATTGCTCGACTCTTCGCAATTTTCCCACAATTCTTTCTCTGCTCTTTAGCCGCTTTATAAA
AGGATATGCATATGGAGAATTTATCATCTAGTGATCCATCACATCAAGCGATGTATGAAAATAGTGATGCAAAGCACTCACAGGATGGGTTGGAGGATGGCTCTCGATGG
TATTTTTCTAGGAAGGAATTAGAAGAATTCTCACCTTCTAAACAAGATGGGATTGACTTGAAGAAGGAGACATATTTACGCAAATCATACTGTACATTTCTCCAAGATTT
GGGAATGAGACTTAAAGTTCCCCAGGTAACCATTGCTACAGCTATAATTTTTTGCCATAGGTTCTTTCTACGGCAGTCTCATGCAAAGAATGACCGAAGGAAACCGACGA
CGGCACCTCAAACATTTGGCGAATTGTTGCTGATGAGCGGTGGTGCAAAGTGCGCACGACGAGCGACAACCCAACTCGCGAGACGGCTATTGGCGAGATCCGGCGGCGGC
GTGGCTGGTCGTAGTGATGGGAGCGCAACGTCGAGCAGTTGA
Protein sequenceShow/hide protein sequence
MHMENLSSSDPSHQAMYENSDAKHSQDGLEDGSRWYFSRKELEEFSPSKQDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRKPTTA
PQTFGELLLMSGGAKCARRATTQLARRLLARSGGGVAGRSDGSATSSS