; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G044590 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G044590
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 1
Genome locationCiama_Chr02:32452817..32458357
RNA-Seq ExpressionCaUC02G044590
SyntenyCaUC02G044590
Gene Ontology termsGO:0051641 - cellular localization (biological process)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR009395 - Biogenesis of lysosome-related organelles complex 1 subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008463815.1 PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucumis melo]9.3e-7292.26Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNRGKFQS+TERLS+DVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDL+VD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTK TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_011657181.1 biogenesis of lysosome-related organelles complex 1 subunit 1 isoform X1 [Cucumis sativus]9.3e-7292.26Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL
        M SSSG SRPDLPV PNR KFQSETERL++DVGGLE SLLQMV DH YASLKLRENSEKAKKDAIQKAVRVSDL+VDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
         TTIARFTK TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_022948128.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata]1.6e-6889.03Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL
        MNS SG SR  LP   NRGKFQSE ERLS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKAVRVSDL+VDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF K TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_023534753.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo]2.2e-6889.03Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL
        MNS SG SR  LP   NRGKFQSE ERLS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKAVRVSDL+VDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF K TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

XP_038900751.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Benincasa hispida]9.0e-7594.19Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL
        MNSSSGPSRPDLPVAPNRGKFQSETE L+++VGGLE SLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDL+ DAVNGGVQ+SFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTK TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

TrEMBL top hitse value%identityAlignment
A0A1S3CKJ9 Biogenesis of lysosome-related organelles complex 1 subunit 14.5e-7292.26Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNRGKFQS+TERLS+DVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDL+VD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        ATTIARFTK TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A5A7V238 Biogenesis of lysosome-related organelles complex 1 subunit 13.3e-5478.67Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL
        M SS G SRPDLPV PNRGKFQS+TERLS+DVGGLE SLLQMV+DH YASLKLRENSEKAKKDAIQKAVRVSDL+VD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIH
        ATTIARFTK TDQWLAATHALNTAVK  G  +  +  +  +  SI   +H
Subjt:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIH

A0A6J1D9F5 Biogenesis of lysosome-related organelles complex 1 subunit 11.1e-6584.52Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL
        M+S SGPSRP LPVA NRG  QSETERLSS+ GGLE SLLQMV+DH +ASLKLR++SEKAKKDAIQKAVRVSDL+V AVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        A TI+RF K TDQWL  THALNTA+KEIGDFENWIKTIDFDCKSIT AIHNIYQD
Subjt:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1G8I4 Biogenesis of lysosome-related organelles complex 1 subunit 18.0e-6989.03Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL
        MNS SG SR  LP   NRGKFQSE ERLS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKAVRVSDL+VDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF K TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

A0A6J1L4G4 Biogenesis of lysosome-related organelles complex 1 subunit 12.0e-6787.74Show/hide
Query:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL
        MNS SG SR   P A NRGKFQSE ERLS+DVGGLE SL QMVNDH YASLKLRENSEKAKKDAIQKA+RVSDL+VDAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRAL

Query:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        +TTI RF K TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
Subjt:  ATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

SwissProt top hitse value%identityAlignment
O22929 Biogenesis of lysosome-related organelles complex 1 subunit 13.4e-4059.85Show/hide
Query:  ETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNT
        E E+   +   LE SLLQ+++D+  +SL+LRE +E+++K+AI+ A R +DL+V AVNGGV+E FVN+K IE EIR LA T+A+F K TDQWLA THA+N+
Subjt:  ETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNT

Query:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        AVKEIGDFENW+KT++FDCK IT AI NI++D
Subjt:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD

P78537 Biogenesis of lysosome-related organelles complex 1 subunit 14.0e-1733.62Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H     + +E  EK +++AI  A  +++ +VD +N GV ++++NQ+ ++ E++ L    A+F K T QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q0VFD8 Biogenesis of lysosome-related organelles complex 1 subunit 19.5e-1937.07Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H     + +E  EK +KDAI  A  +++ +VD +N GV +++VNQ+ ++ E++ L T  A+F K T QW++     N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D + I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q2NKW0 Biogenesis of lysosome-related organelles complex 1 subunit 14.0e-1733.62Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +H     + +E  EK +++AI  A  +++ +VD +N GV ++++NQ+ ++ E++ L    A+F K T QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIYQ
        + D ++I TA+  +Y+
Subjt:  DFDCKSITTAIHNIYQ

Q54VX7 Biogenesis of lysosome-related organelles complex 1 subunit 14.0e-1740.87Show/hide
Query:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTI
        L ++V DH     KL+E +E  KK+AI     V++ ++D+VN GV   F NQK +E E R L    A+F+K T+QW+      N ++KEIGD ENW K I
Subjt:  LLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFDCKSITTAIHNIY
        + D  +I+  I  +Y
Subjt:  DFDCKSITTAIHNIY

Arabidopsis top hitse value%identityAlignment
AT2G30330.1 GCN5L1 family protein2.4e-4159.85Show/hide
Query:  ETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNT
        E E+   +   LE SLLQ+++D+  +SL+LRE +E+++K+AI+ A R +DL+V AVNGGV+E FVN+K IE EIR LA T+A+F K TDQWLA THA+N+
Subjt:  ETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKHTDQWLAATHALNT

Query:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD
        AVKEIGDFENW+KT++FDCK IT AI NI++D
Subjt:  AVKEIGDFENWIKTIDFDCKSITTAIHNIYQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTTCGTCGGGGCCATCACGGCCGGACCTCCCCGTAGCACCTAATCGCGGGAAGTTTCAATCGGAGACGGAGAGATTGAGCTCCGACGTTGGTGGATTGGAAGG
TTCATTGCTTCAGATGGTTAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAAAGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATC
TTGTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCGAAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCAC
ACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTAC
AGCCATCCATAACATTTATCAAGACTGA
mRNA sequenceShow/hide mRNA sequence
AACTCAGCGTGAAATGTGAAGACAGAATATTTCGCGGGGCGAACATGAATTCTTCGTCGGGGCCATCACGGCCGGACCTCCCCGTAGCACCTAATCGCGGGAAGTTTCAA
TCGGAGACGGAGAGATTGAGCTCCGACGTTGGTGGATTGGAAGGTTCATTGCTTCAGATGGTTAATGATCACCACTACGCCTCTCTCAAGCTCAGGGAAAACTCCGAGAA
AGCGAAGAAAGATGCTATACAGAAGGCGGTGCGCGTTTCGGATCTTGTAGTCGATGCCGTGAATGGTGGAGTTCAGGAATCTTTTGTCAATCAGAAGTTGATTGAGCTCG
AAATTAGGGCTTTAGCGACTACGATTGCCCGATTTACGAAGCACACCGATCAATGGCTTGCCGCCACTCACGCTTTGAACACTGCCGTTAAGGAAATTGGAGATTTTGAG
AACTGGATAAAGACCATCGATTTCGATTGTAAAAGCATCACTACAGCCATCCATAACATTTATCAAGACTGAAATGCTTGTAGTTAAAGAGTCAACCAGAGTGTTTTCTG
TGGAGTCGAGAAAAACATAGAACCTCATCCTCTGCTTTAAGCTGAATCTGTGCCCCCATATATGGCTTGATAAGTTCTTGCGGTATAAGGATATGAAGGGTCCAGCATGT
CTAGATGGAAACTCTTACAGAAACTTAGAACACCCCTGTCACTTGACATGTCTGCTACTTCGCTAACTCTGAAATAATTTGTGGACTCTGGTTTTTTAGTTCACTGATTT
ATTCCACGTTAGCACAGTGCATGTTACCATTTTCTCTATTTAGTGCTCATGTAAACTGCAGTTTTTTTTGTACAATTATTAGCAGCTGCCATGTAATAATAATTTCTACA
TTCTTTCAATTTTCTGAATCCATATTGTACTCTCACCATTAATATTCTGCTTCATAATTATCAGATATATCATCGTATTAGGTGGGTTCACATTCACAATGTTTAAGTTC
TCTCTCCTGACCAAGAACAATGTTGCCACTTGGCGGTTGCATTTACCTTTTACATGGTTTTTTCCCCCAACTGATGACTTTATCTTTGTTGACATACTCAACCACTATCA
TTTCCTAGCGTCTGGAGGTCCCGTTTTGTTATACTTCAACCAAAAAGAGGCCCAGGATTGAGCTGAACCCGCTGACAATTCCGATGTGATTGCTTTCTACGTTAATTCTG
GATTCATCTTGGCCTGGACATCAACAGCTCTCAGTTTTGGATTTGTAGAATACTCATTTCGACTTCTGAGGGAAAAAAAAGTGTGGATAACGATAGTTGGATGGAGGAAT
GGGGCAAATGTAGTAGGTAAAGCAAATCCAAAGCTTTAAAACAAGTTTGTCAAAGACCAACCTAATCTGCGCTCATCAGGAACAGTTGACTTAGCCGTGAAGGATGGAGT
GTTTCACAAGTTGATCAATTGTCAACGTTTTAATATAAATTTGGTCAAAACCAAGCTTGAGTTTTGTGTCTCTTTGTAAGGCATTGACCCTCTCTCTTAAATGACACTTT
ATTATTCCTCTTTCAGGCCAAGTCATAGGTTCCAAGCTTTAAATATTCAGGAGGTGTTGCTAAAATGAGCATAGCTCAATTGACATGAACTAATATTATCAATCTTGAAG
TTTGAGGAAAATTTGATTACAAACGCTTCAAGTGGCAGAATTCTAGTCGTTAGGCAGTGTGTTTCCATGAGCCAATTGCGTAGGCAAATTTAGAGTTGAAGGTTGGCATT
GGCAATTGGCAAAATTATAGAGTGATGTTGAGGATCGCAAATGTAAACGATGGAAAAGTTCAGAGTAGCTCCCACAAATAAAGAGTTCCTACTTAGTTTGGTTTATAAGT
TTATTAGGGTTCATTTCTAGTAATTTGATTAGAAAAATACTAACATGTATCTCGAGTTACCTATCTTTGTGCATCCTATTAAGTTGTCTAATCATAATTAGTTACCTATC
TTTGTGCATCCTATTAAATTGTCTAATCATAATT
Protein sequenceShow/hide protein sequence
MNSSSGPSRPDLPVAPNRGKFQSETERLSSDVGGLEGSLLQMVNDHHYASLKLRENSEKAKKDAIQKAVRVSDLVVDAVNGGVQESFVNQKLIELEIRALATTIARFTKH
TDQWLAATHALNTAVKEIGDFENWIKTIDFDCKSITTAIHNIYQD