CuGenDBv2

Gene ID	CaUC02G044950
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	30S ribosomal protein S18
Genome location	Ciama_Chr02:32781219..32783563
RNA-Seq Expression	CaUC02G044950
Synteny	CaUC02G044950
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005763 - mitochondrial small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domains	IPR001648 - Ribosomal protein S18 IPR036870 - Ribosomal protein S18 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6570652.1 hypothetical protein SDJN03_29567, partial [Cucurbita argyrosperma subsp. sororia]

4.5e-130

90.77

Show/hide

Query:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY
        MRTVQVALRTLGGGLSRR KQP VLRNLSTNAARDSGF DDKGKPDSFESADDFERRIFGGVS+GD GN+AFFEKLDR+GKPRE IGSRLSGGNNF S Y
Subjt:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY

Query:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII
        GL+DNLNTLSDGMDGKLKKASTYFEFD EEIAKDDYTFRADMSFKPGSTYE KDLDL KPGVRKPPKRVEFQV TEEVLRKADFRNVRFLANFITDAGII
Subjt:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII

Query:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS
        IKRSKT ISAKAQRKVAREIKTARAFGLMPFTTMGTKSF+FG+TME+LDKD+EYEVFD+N   DG RPLGS
Subjt:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS

KAG7010502.1 rpsR [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-128

90.41

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Query:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY
        MRTVQVALRTLGGGLSRR KQP VLRNLSTNAARDSGF DDKGKPDSFESADDFERRIFGGVS+GDSGN+AFFEKLDR+GKPRE IGSRLSGGNNF S Y
Subjt:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY

Query:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII
        GL+DNLNTLSDGMDGKLKKASTYFEFD EEIAKDDYTFRADMSFKPGSTYE  DLDL KPGVRKPPKRVEFQV TEEVLRKADFRNVRFLANFITDAGII
Subjt:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII

Query:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS
        IKRSKT ISAKAQRKVAREIKTARAFGLMPFTTMGTKSF+FG+TME+LDKD+EYE+FD+N   DG RPLGS
Subjt:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS

XP_022943865.1 uncharacterized protein LOC111448465 [Cucurbita moschata]

3.5e-130

90.77

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Query:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY
        MRTVQVALRTLGGGLSRR KQP VLRNLSTNAARDSGF DDKGKPDSFESADDFERRIFGGVS+GDSGN+AFFEKLDR+GKPRE IGSRLSGGNNF S Y
Subjt:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY

Query:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII
        GL+DNLNTLSDGMDGKLKKASTYFEFD EEIAKDDYTFRADMSFKPGSTYE KDLDL KPGVRKPPKRVEFQV TEEVLRKADFRNVRFLANFITDAGII
Subjt:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII

Query:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS
        IKRSKT ISAKAQRKVAREIKTARAFGLMPFTTMGTKSF+FG+TME+LDKD+EYEVFD+N   DG  PLGS
Subjt:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS

XP_022986919.1 uncharacterized protein LOC111484513 [Cucurbita maxima]

3.5e-130

90.77

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Query:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY
        M TVQVALRTLGGGLSRR KQP VLRNLSTNAARDSGF DDKGKPDSFESADDFERRIFGGVS+GDSGN+AFFEKLDRLGKPRE IGSRLSGGNNF + Y
Subjt:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY

Query:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII
        GL+DNLNTLSDGMDGKLKKASTYFEFD EEIAKDDYTFRADMSFKPGSTYE KDLDL KPGVRKPPKRVEFQV TEEVLRKADFRNVRFLANFITDAGII
Subjt:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII

Query:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS
        IKRSKT ISAKAQRKVAREIKTARAFGLMPFTTMGTKSF+FG+TME+LDKD+EYEVFD+N   DGG PLGS
Subjt:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS

XP_023512473.1 uncharacterized protein LOC111777218 [Cucurbita pepo subsp. pepo]

3.5e-130

91.14

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Query:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY
        MRTVQVALRTLG GLSRR KQP VLRNLSTNAARDSGF DDKGKPDSFESADDFERRIFGGVS+GDSGN+AFFEKLDRLGKPRE IGSRLSGGNNF S Y
Subjt:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY

Query:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII
        GL+DNLNTLSDGMDGKLKKASTYFEFD EEIAKDDYTFRADMSFKPGSTYE KDLDL KPGVRKPPKRVEFQV TEEVLRKADFRNVRFLANFITDAGII
Subjt:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII

Query:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS
        IKRSKT ISAKAQRKVAREIKTARAFGLMPFTTMGTKSF+FG+TME+LDKD+EYEVFD+N   DGG PLGS
Subjt:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D4R9 uncharacterized protein LOC111017003

7.8e-128

86.72

Show/hide

Query:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY
        MRTVQ ALR+LGGGLS+R KQ  +LR+LSTNAAR++GFDD+K KPDSFESADDFERRIFGGVS  DSGNEAFFEKLDRLGKPRE +GSRLSGGNNF + Y
Subjt:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY

Query:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII
        GL+D LNTLSDGMDGKLKKA+TYFEFDPEEI+KDDYTFRADMSFKPGSTYE KDLDLRKPGVRKPPKRVEFQV TEEVL+KADFRNVRFLANFITDAGII
Subjt:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII

Query:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS
         KRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTK+F+FG+TME+LDKD+EYEVFD+ ADAD G PLGS
Subjt:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS

A0A6J1FYC1 uncharacterized protein LOC111448465

1.7e-130

90.77

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Query:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY
        MRTVQVALRTLGGGLSRR KQP VLRNLSTNAARDSGF DDKGKPDSFESADDFERRIFGGVS+GDSGN+AFFEKLDR+GKPRE IGSRLSGGNNF S Y
Subjt:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY

Query:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII
        GL+DNLNTLSDGMDGKLKKASTYFEFD EEIAKDDYTFRADMSFKPGSTYE KDLDL KPGVRKPPKRVEFQV TEEVLRKADFRNVRFLANFITDAGII
Subjt:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII

Query:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS
        IKRSKT ISAKAQRKVAREIKTARAFGLMPFTTMGTKSF+FG+TME+LDKD+EYEVFD+N   DG  PLGS
Subjt:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS

A0A6J1G586 uncharacterized protein LOC111451027 isoform X1

6.6e-127

87.08

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Query:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY
        MR VQVA RT+GGG++R+ KQP  LRNLSTNAARD  FDD+ GK +SFESADDFERRIFGGVS GDSGN+AFFEKLDRLGKPRE IGSRLSGGNNF + Y
Subjt:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY

Query:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII
        G+EDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYE KDLDL KPGVRKPPKRVEFQV TEEVLRKADFRNVRFLANFITDAGII
Subjt:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII

Query:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS
         KRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSF+FG+TME LDKD+EYEVF++N DAD GRP GS
Subjt:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS

A0A6J1JHF0 uncharacterized protein LOC111484513

1.7e-130

90.77

Show/hide

Query:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY
        M TVQVALRTLGGGLSRR KQP VLRNLSTNAARDSGF DDKGKPDSFESADDFERRIFGGVS+GDSGN+AFFEKLDRLGKPRE IGSRLSGGNNF + Y
Subjt:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFY

Query:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII
        GL+DNLNTLSDGMDGKLKKASTYFEFD EEIAKDDYTFRADMSFKPGSTYE KDLDL KPGVRKPPKRVEFQV TEEVLRKADFRNVRFLANFITDAGII
Subjt:  GLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGII

Query:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS
        IKRSKT ISAKAQRKVAREIKTARAFGLMPFTTMGTKSF+FG+TME+LDKD+EYEVFD+N   DGG PLGS
Subjt:  IKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS

A0A6J1KYL3 LOW QUALITY PROTEIN: uncharacterized protein LOC111499912

1.2e-120

85.93

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Query:  RTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFYGLEDNLNT
        RT+GGG++R+ KQP  LRNLSTNAARD  FDD+ GK +SFESADDFERRIFGGVS GDSGN+AFFEKLDRLGKPRE IGSRLSGGNNF + YG+EDNLNT
Subjt:  RTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFYGLEDNLNT

Query:  LSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGI
        LSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYE KDLDL KPGVRK PKRVEF V TEEVLR ADFRNVRFLANFITDAGII KRSKTGI
Subjt:  LSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGI

Query:  SAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS
        SAKAQRKVAREIKTARAFGLMP TTMGTKSF+FG+TME LDKD+EYEVF++N DAD GRP GS
Subjt:  SAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS

SwissProt top hits

e value

%identity

Alignment

C1CXK0 30S ribosomal protein S18

1.1e-06

Show/hide

Query:  RKP---GVRKP--PKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFT
        RKP   G ++P  PK   F +   E+    D+++V+ L  F++D G I+ R +TG+SAK QR++A+ IK AR   L+P+T
Subjt:  RKP---GVRKP--PKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFT

P62659 30S ribosomal protein S18

1.3e-07

39.51

Show/hide

Query:  TKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFT
        TK+   +K   R+P ++ + +    E     D+RNV  L  F+++ G I+ R +TG+SAK QR +A+ IK AR  GL+PFT
Subjt:  TKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFT

P80382 30S ribosomal protein S18

3.8e-07

38.27

Show/hide

Query:  TKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFT
        TK+   +K   R+P ++ + +    E     D+RNV  L  F+++ G I+ R +TG+S K QR +A+ IK AR  GL+PFT
Subjt:  TKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFT

Q5SLQ0 30S ribosomal protein S18

1.3e-07

39.51

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Query:  TKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFT
        TK+   +K   R+P ++ + +    E     D+RNV  L  F+++ G I+ R +TG+SAK QR +A+ IK AR  GL+PFT
Subjt:  TKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFT

Q9RY50 30S ribosomal protein S18

1.1e-06

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Query:  RKP---GVRKP--PKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFT
        RKP   G ++P  PK   F +   E+    D+++V+ L  F++D G I+ R +TG+SAK QR++A+ IK AR   L+P+T
Subjt:  RKP---GVRKP--PKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFT

Arabidopsis top hits

e value

%identity

Alignment

AT1G07210.1 Ribosomal protein S18

7.1e-49

45.05

Show/hide

Query:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGI-------GSRLSGG
        M   + A R+L      R  +P V R+L+TNA      +D      SF+S+D+ +  +FG  +  D  +  FF+ L +  K +          GSR SGG
Subjt:  MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGI-------GSRLSGG

Query:  NNFHSFYGLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANF
         +       ++  +  SDG+DGKLK+A+  +  D  +  K +Y+FR D +   G     +   ++K          + +V TEEVL+ ADFRNVRFLANF
Subjt:  NNFHSFYGLEDNLNTLSDGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANF

Query:  ITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGG
        IT+AGIIIKR +TGISAKAQRK+AREIKTARAFGLMPFTTMGTK+F FG+TMEN D+DFEYEV DD+ + D G
Subjt:  ITDAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGAACCGTTCAGGTTGCTTTGCGAACCCTTGGCGGTGGCCTATCGCGGAGATTAAAGCAACCTTATGTGCTCAGAAACCTTTCCACAAACGCCGCTCGTGATAGTGG
ATTTGATGATGATAAGGGAAAACCTGATTCGTTTGAGTCTGCTGATGACTTCGAACGTCGGATATTTGGGGGTGTTTCTTCGGGCGATTCTGGAAATGAGGCTTTCTTTG
AGAAGCTTGATAGACTTGGCAAACCTCGTGAAGGAATAGGTTCGAGATTGAGTGGAGGAAACAATTTTCATTCGTTCTATGGTCTTGAAGATAATCTTAACACGCTATCA
GATGGGATGGATGGCAAGTTGAAGAAAGCTTCCACTTATTTTGAGTTTGATCCCGAGGAAATAGCAAAAGATGATTATACTTTCAGAGCAGATATGTCTTTTAAGCCTGG
ATCAACATACGAAACCAAGGATCTGGATCTAAGAAAGCCAGGTGTACGTAAGCCCCCCAAAAGGGTTGAGTTTCAGGTGAAAACGGAGGAGGTCTTAAGAAAAGCTGATT
TCAGGAATGTTAGGTTTCTGGCAAACTTTATAACTGATGCCGGGATCATTATCAAGAGGAGCAAGACAGGTATTAGTGCCAAGGCACAGAGGAAAGTTGCGCGCGAGATC
AAAACTGCACGAGCATTTGGCTTAATGCCCTTCACAACAATGGGAACAAAATCATTTATTTTTGGCAGAACCATGGAAAATCTTGATAAGGACTTCGAGTATGAAGTTTT
CGACGATAATGCTGATGCAGATGGGGGTCGCCCGCTTGGATCCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRTVQVALRTLGGGLSRRLKQPYVLRNLSTNAARDSGFDDDKGKPDSFESADDFERRIFGGVSSGDSGNEAFFEKLDRLGKPREGIGSRLSGGNNFHSFYGLEDNLNTLS
DGMDGKLKKASTYFEFDPEEIAKDDYTFRADMSFKPGSTYETKDLDLRKPGVRKPPKRVEFQVKTEEVLRKADFRNVRFLANFITDAGIIIKRSKTGISAKAQRKVAREI
KTARAFGLMPFTTMGTKSFIFGRTMENLDKDFEYEVFDDNADADGGRPLGS

CaUC02G044950 (gene) of Watermelon (USVL246-FR2) v1 genome