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CaUC02G045300 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G045300
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionMajor viral transcription factor
Genome locationCiama_Chr02:33146287..33146709
RNA-Seq ExpressionCaUC02G045300
SyntenyCaUC02G045300
Gene Ontology termsNA
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061869.1 uncharacterized protein E6C27_scaffold89G001110 [Cucumis melo var. makuwa]3.1e-5085.6Show/hide
Query:  MENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQRGRGFAAPGGWQHPAV
        MENE + RLPKPPTRLQKQAPASLHLDQLSS SMSS S D+ SKAILPLLSPLPLSPQPLPEIDGNRIS  GNA + GGGN DQRG GF APGGWQHPAV
Subjt:  MENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQRGRGFAAPGGWQHPAV

Query:  AATFADPSTLFTFFQSQCIVTSNTP
        AATF DPSTLFTFFQSQCIV+SNTP
Subjt:  AATFADPSTLFTFFQSQCIVTSNTP

KAG6605440.1 hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4876.43Show/hide
Query:  MNANQTVVVDFLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQR
        MNANQ  VVDF   +ME EH++RLPKPPTRLQKQAPASLHLDQL+S SMSSGS D  SKAILPLLSPLP SPQP PE +GNR + NGN  D G G  DQR
Subjt:  MNANQTVVVDFLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQR

Query:  GRGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP
        G  FA PGGWQHPAVA TFADPSTLFTFFQSQCIV S TP
Subjt:  GRGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP

XP_011657141.1 uncharacterized protein LOC105435808 [Cucumis sativus]2.8e-5987.14Show/hide
Query:  MNANQTVVVDFLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQR
        M+ANQTVVVDFLRGSMENE++ RLPKPPTRLQKQAPASLHLDQLSS SMSS S D  SKAILPLLSPLPLSPQPLPEIDGNRIS NGNA D GGGN DQR
Subjt:  MNANQTVVVDFLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQR

Query:  GRGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP
        G GF APGGWQHPAVAATF DPSTLFTFFQSQC+V+SNTP
Subjt:  GRGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP

XP_023512816.1 uncharacterized protein LOC111777440 [Cucurbita pepo subsp. pepo]5.0e-4873.57Show/hide
Query:  MNANQTVVVDFLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQR
        MNANQ+ VVDFLR +M+NE   R+PKPPTRLQKQAPA L+LDQLSS SMSS  T+  SK +LPLLSPLP SPQP  E +GNR+  NGN A D GGN DQR
Subjt:  MNANQTVVVDFLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQR

Query:  GRGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP
        G  FA+PGGWQHPAVAAT+ADPSTLFTFFQS+CI+TSNTP
Subjt:  GRGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP

XP_038902307.1 uncharacterized protein LOC120088941 [Benincasa hispida]1.4e-6392.14Show/hide
Query:  MNANQTVVVDFLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQR
        MNANQTVV+DFLRGSMENEH+ARLPKPPTRLQKQAPASLHLDQLSS SMSSGS D+ SKAILPLLSPLPLSPQPLPEIDGNRIS NGNAAD GGGN DQR
Subjt:  MNANQTVVVDFLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQR

Query:  GRGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP
        G GFAAPGGWQHPAVAATF DPSTLFTFFQSQCIVTSNTP
Subjt:  GRGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP

TrEMBL top hitse value%identityAlignment
A0A0A0KBQ7 Uncharacterized protein1.4e-5987.14Show/hide
Query:  MNANQTVVVDFLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQR
        M+ANQTVVVDFLRGSMENE++ RLPKPPTRLQKQAPASLHLDQLSS SMSS S D  SKAILPLLSPLPLSPQPLPEIDGNRIS NGNA D GGGN DQR
Subjt:  MNANQTVVVDFLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQR

Query:  GRGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP
        G GF APGGWQHPAVAATF DPSTLFTFFQSQC+V+SNTP
Subjt:  GRGFAAPGGWQHPAVAATFADPSTLFTFFQSQCIVTSNTP

A0A5A7V856 Uncharacterized protein1.5e-5085.6Show/hide
Query:  MENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQRGRGFAAPGGWQHPAV
        MENE + RLPKPPTRLQKQAPASLHLDQLSS SMSS S D+ SKAILPLLSPLPLSPQPLPEIDGNRIS  GNA + GGGN DQRG GF APGGWQHPAV
Subjt:  MENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQRGRGFAAPGGWQHPAV

Query:  AATFADPSTLFTFFQSQCIVTSNTP
        AATF DPSTLFTFFQSQCIV+SNTP
Subjt:  AATFADPSTLFTFFQSQCIVTSNTP

A0A6J1D5B7 uncharacterized protein LOC1110170714.4e-2667.92Show/hide
Query:  MNANQTVVVDFLRGSMENEHRA--RLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEID---GNRISVNGNAADDGGG
        MNANQ+ V+DFLR SME EH+A  R+PKPPTRLQKQAPASLHLDQ+SS SM+ G  ++ SKAILPLLSPLPLSPQP PE +    NR+S     A DGGG
Subjt:  MNANQTVVVDFLRGSMENEHRA--RLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEID---GNRISVNGNAADDGGG

Query:  NVDQRG
          DQRG
Subjt:  NVDQRG

A0A6P3ZH11 uncharacterized protein LOC1074110181.4e-1654.87Show/hide
Query:  KPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQRGRGFAAPG-GWQHPAVAATFADPST
        KPPTRLQK+APASL LDQ+ + S ++ S +  SKAI PLLSPL LSPQPLPE+   R       A D     D+R      P  GWQHPAV  TF DPS+
Subjt:  KPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQRGRGFAAPG-GWQHPAVAATFADPST

Query:  LFTFFQSQCIVTS
        LF FFQSQC++ +
Subjt:  LFTFFQSQCIVTS

A0A7J7DE91 Uncharacterized protein3.5e-1544Show/hide
Query:  FLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQRGRGFAAPGGW
        F R  +E++++AR+ KPPTRLQK+APASL LDQ+++   S       +   +PLLSPL +SP PL E +      N    D G    +  G      GGW
Subjt:  FLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQRGRGFAAPGGW

Query:  QHPAVAATFADPSTLFTFFQSQCIV
        QHPAV A + +PS +F FFQSQC++
Subjt:  QHPAVAATFADPSTLFTFFQSQCIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07473.1 unknown protein1.6e-0444.44Show/hide
Query:  RARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQP
        ++  P+ PTRLQKQAP +LHL  +        S+D      +PLLSPL +SP P
Subjt:  RARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCAAATCAGACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAGAACGAACACAGAGCCAGATTACCTAAACCTCCGACCAGGTTACAGAAGCAGGCGCCGGC
AAGTCTTCATCTCGATCAACTTTCAAGCGCCTCAATGTCTTCTGGCAGTACCGACAGTCGTTCGAAGGCGATCCTTCCTCTCCTATCGCCACTCCCTTTATCGCCACAGC
CGTTGCCTGAAATTGACGGAAATAGAATATCCGTGAACGGAAATGCCGCAGACGACGGCGGCGGTAATGTCGATCAAAGAGGTAGAGGTTTTGCAGCTCCTGGTGGCTGG
CAACACCCAGCAGTGGCGGCGACATTCGCCGATCCTTCCACACTGTTTACTTTCTTTCAATCGCAATGCATCGTGACCAGTAACACACCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCAAATCAGACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAGAACGAACACAGAGCCAGATTACCTAAACCTCCGACCAGGTTACAGAAGCAGGCGCCGGC
AAGTCTTCATCTCGATCAACTTTCAAGCGCCTCAATGTCTTCTGGCAGTACCGACAGTCGTTCGAAGGCGATCCTTCCTCTCCTATCGCCACTCCCTTTATCGCCACAGC
CGTTGCCTGAAATTGACGGAAATAGAATATCCGTGAACGGAAATGCCGCAGACGACGGCGGCGGTAATGTCGATCAAAGAGGTAGAGGTTTTGCAGCTCCTGGTGGCTGG
CAACACCCAGCAGTGGCGGCGACATTCGCCGATCCTTCCACACTGTTTACTTTCTTTCAATCGCAATGCATCGTGACCAGTAACACACCGTAA
Protein sequenceShow/hide protein sequence
MNANQTVVVDFLRGSMENEHRARLPKPPTRLQKQAPASLHLDQLSSASMSSGSTDSRSKAILPLLSPLPLSPQPLPEIDGNRISVNGNAADDGGGNVDQRGRGFAAPGGW
QHPAVAATFADPSTLFTFFQSQCIVTSNTP