; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G045690 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G045690
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionhistone H4
Genome locationCiama_Chr02:33469068..33471207
RNA-Seq ExpressionCaUC02G045690
SyntenyCaUC02G045690
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006335 - DNA replication-dependent nucleosome assembly (biological process)
GO:0006336 - DNA replication-independent nucleosome assembly (biological process)
GO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0045653 - negative regulation of megakaryocyte differentiation (biological process)
GO:0000228 - nuclear chromosome (cellular component)
GO:0005654 - nucleoplasm (cellular component)
GO:0043505 - CENP-A containing nucleosome (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR001951 - Histone H4
IPR009072 - Histone-fold
IPR019809 - Histone H4, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EMS67926.1 Histone H4 [Triticum urartu]1.3e-3877.42Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVK-----------L
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV            L
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVK-----------L

Query:  QRDSMSTGAE----CVGIQCRGAC
          DS  + A+    CV I C+ +C
Subjt:  QRDSMSTGAE----CVGIQCRGAC

KAE8646972.1 hypothetical protein Csa_021021 [Cucumis sativus]3.6e-4168.42Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV-------------
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV             
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV-------------

Query:  ----------------------------KLQRDSMSTGAECVGIQCRGACSF
                                    K Q DSMS+  E VGI CRGACSF
Subjt:  ----------------------------KLQRDSMSTGAECVGIQCRGACSF

RZC64679.1 hypothetical protein C5167_008360 [Papaver somniferum]1.7e-3885.19Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQRDSMSTGAEC
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV             
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQRDSMSTGAEC

Query:  VGIQCRGA
         G Q RGA
Subjt:  VGIQCRGA

VAH65703.1 unnamed protein product [Triticum turgidum subsp. durum]1.3e-3877.42Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVK-----------L
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV            L
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVK-----------L

Query:  QRDSMSTGAE----CVGIQCRGAC
          DS  + A+    CV I C+ +C
Subjt:  QRDSMSTGAE----CVGIQCRGAC

XP_004317749.2 LOW QUALITY PROTEIN: histone H4 [Tursiops truncatus]7.5e-3987.62Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQ---RDSMST-
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDV  +   RD++ST 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQ---RDSMST-

Query:  -GAEC
          AEC
Subjt:  -GAEC

TrEMBL top hitse value%identityAlignment
A0A0E0F0E6 Histone H41.2e-3998.9Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQR
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKL R
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQR

A0A0E0F0E7 Histone H41.2e-3998.9Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQR
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKL R
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQR

A0A0E0F0E8 Histone H41.2e-3998.9Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQR
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKL R
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQR

A0A0E0F0E9 Histone H41.2e-3998.9Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQR
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKL R
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQR

A0A2U3V3D2 Histone H43.6e-3987.62Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQ---RDSMST-
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDV  +   RD++ST 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQ---RDSMST-

Query:  -GAEC
          AEC
Subjt:  -GAEC

SwissProt top hitse value%identityAlignment
P59259 Histone H41.1e-40100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV

P62785 Histone H4 variant TH0111.1e-40100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV

Q6LAF3 Histone H41.1e-40100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV

Q6PMI5 Histone H41.1e-40100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV

Q6WZ83 Histone H41.1e-40100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV

Arabidopsis top hitse value%identityAlignment
AT1G07660.1 Histone superfamily protein7.7e-42100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV

AT1G07820.1 Histone superfamily protein7.7e-42100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV

AT1G07820.2 Histone superfamily protein7.7e-42100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV

AT2G28740.1 histone H47.7e-42100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV

AT3G45930.1 Histone superfamily protein7.7e-42100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGACGAGGAAAGGGAGGCAAGGGATTGGGTAAAGGAGGAGCAAAGCGTCATAGAAAGGTTTTGAGAGATAACATTCAAGGCATTACCAAGCCTGCAATTCGCCG
TTTGGCTCGTAGGGGTGGTGTGAAGCGTATCAGTGGATTAATCTATGAAGAAACCAGAGGGGTTTTGAAGATTTTCCTCGAGAATGTGATTCGCGATGCTGTGACCTATA
CCGAGCACGCTAGGAGGAAGACGGTGACTGCTATGGACGTGAAGCTGCAGAGGGATTCAATGTCTACCGGTGCGGAATGTGTCGGGATTCAGTGTCGAGGCGCTTGCAGC
TTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGACGAGGAAAGGGAGGCAAGGGATTGGGTAAAGGAGGAGCAAAGCGTCATAGAAAGGTTTTGAGAGATAACATTCAAGGCATTACCAAGCCTGCAATTCGCCG
TTTGGCTCGTAGGGGTGGTGTGAAGCGTATCAGTGGATTAATCTATGAAGAAACCAGAGGGGTTTTGAAGATTTTCCTCGAGAATGTGATTCGCGATGCTGTGACCTATA
CCGAGCACGCTAGGAGGAAGACGGTGACTGCTATGGACGTGAAGCTGCAGAGGGATTCAATGTCTACCGGTGCGGAATGTGTCGGGATTCAGTGTCGAGGCGCTTGCAGC
TTTTGA
Protein sequenceShow/hide protein sequence
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVKLQRDSMSTGAECVGIQCRGACS
F