; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G046490 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G046490
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionResponse regulator
Genome locationCiama_Chr02:34236968..34243929
RNA-Seq ExpressionCaUC02G046490
SyntenyCaUC02G046490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV66388.1 hypothetical protein CFOL_v3_09898 [Cephalotus follicularis]6.0e-2772.04Show/hide
Query:  TKTPTCSFTPTIFQSKTPLLTPDFGHQELSTIDSPSGPLCPPTTTSFSPQALKASPHPFEESALTGSLPNTFQVFPTFSYFITMFVKCSTAYS
        T TPTCSFTP  FQSK P L PDFGHQE STI SPSGP CPPTT S SP ALKA P PF+ES LTGSLP T QVF + SYF+TM V+ S+AYS
Subjt:  TKTPTCSFTPTIFQSKTPLLTPDFGHQELSTIDSPSGPLCPPTTTSFSPQALKASPHPFEESALTGSLPNTFQVFPTFSYFITMFVKCSTAYS
GER57711.1 response regulator [Striga asiatica]1.6e-1640.46Show/hide
Query:  MREKIYSHCFYRPKRLGHRHGLDPVTSKTSTAHIPPSSTMAYTALWHLPSNFQGCMKCNCAKVHGSLQDLVLCHPSAKTINKSGKSQSEYLQMNCMGNGF
        MR+KI SH FYR K LG RHGL P +S+TS  ++ PS  +       +P  F G     CA++        +CH   +T+  +G +   +++ N     +
Subjt:  MREKIYSHCFYRPKRLGHRHGLDPVTSKTSTAHIPPSSTMAYTALWHLPSNFQGCMKCNCAKVHGSLQDLVLCHPSAKTINKSGKSQSEYLQMNCMGNGF

Query:  LN----------------------------ITIPTRCAKVSPIVPVPQQISNSKVSGPNPAQSPASEYSFSAA
         N                            ITIPTR AKV PIVPVPQQ S SKV GPNPAQSPASEY+FSAA
Subjt:  LN----------------------------ITIPTRCAKVSPIVPVPQQISNSKVSGPNPAQSPASEYSFSAA
TrEMBL top hitse value%identityAlignment
A0A1Q3BEL6 Uncharacterized protein2.9e-2772.04Show/hide
Query:  TKTPTCSFTPTIFQSKTPLLTPDFGHQELSTIDSPSGPLCPPTTTSFSPQALKASPHPFEESALTGSLPNTFQVFPTFSYFITMFVKCSTAYS
        T TPTCSFTP  FQSK P L PDFGHQE STI SPSGP CPPTT S SP ALKA P PF+ES LTGSLP T QVF + SYF+TM V+ S+AYS
Subjt:  TKTPTCSFTPTIFQSKTPLLTPDFGHQELSTIDSPSGPLCPPTTTSFSPQALKASPHPFEESALTGSLPNTFQVFPTFSYFITMFVKCSTAYS
A0A5A7RKI8 Response regulator7.9e-1740.46Show/hide
Query:  MREKIYSHCFYRPKRLGHRHGLDPVTSKTSTAHIPPSSTMAYTALWHLPSNFQGCMKCNCAKVHGSLQDLVLCHPSAKTINKSGKSQSEYLQMNCMGNGF
        MR+KI SH FYR K LG RHGL P +S+TS  ++ PS  +       +P  F G     CA++        +CH   +T+  +G +   +++ N     +
Subjt:  MREKIYSHCFYRPKRLGHRHGLDPVTSKTSTAHIPPSSTMAYTALWHLPSNFQGCMKCNCAKVHGSLQDLVLCHPSAKTINKSGKSQSEYLQMNCMGNGF

Query:  LN----------------------------ITIPTRCAKVSPIVPVPQQISNSKVSGPNPAQSPASEYSFSAA
         N                            ITIPTR AKV PIVPVPQQ S SKV GPNPAQSPASEY+FSAA
Subjt:  LN----------------------------ITIPTRCAKVSPIVPVPQQISNSKVSGPNPAQSPASEYSFSAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCATCACCATCTCACAGTGGGGTGTATGAGGGAAAAGATCTACAGCCATTGCTTTTACAGGCCGAAAAGGCTCGGACATCGGCATGGACTTGACCCGGTGACGAG
CAAGACCAGCACTGCCCATATTCCTCCATCCTCGACGATGGCGTACACAGCTCTATGGCATTTGCCATCAAACTTTCAGGGTTGCATGAAATGTAACTGCGCCAAGGTAC
ATGGTTCACTACAGGATCTTGTTCTTTGTCATCCAAGTGCAAAAACAATTAATAAATCAGGGAAGTCACAATCAGAGTACCTACAAATGAATTGCATGGGAAATGGCTTT
TTGAATATTACCATACCAACACGATGTGCTAAAGTCAGTCCAATTGTTCCAGTTCCACAGCAAATATCAAATAGCAAAGTGTCAGGGCCCAACCCAGCCCAATCCCCAGC
AAGTGAATACAGCTTCTCAGCAGCAAGTTTAGTGGCAATGGCGGTGAATTTGCAACAGATCCTTCAGCAAAAGCTTGAGCAAACATTAACCTGGACAATGAGCATAACCT
CACTGATGCTTGCATCAGAATTATCAGAATCAATCAACTTCCCTGGAGTCCGTCCTTCTCGAACCTTCCATGGTTCACAGAACAGAATTGTCAACAGGAATACACTGGAT
GGAGTAGAACTCCCATCATTTGTGTTAGCAGCATCTTCATCATCATTTGATGTTAAGGAGACAGCCGCCGAAGATACAGAGCTATTATCACAATCCATTGACGATTTAAT
TCATTTACTAAGCCCATTATCCCTTCCGTCATTGCCATCCTCATCGTCGTCGTCAACGACGACCTCCGTCATCATGACCTCCTCTTCCTTAACTTCCTCCCCCACTTTCA
TCACCTTTTTAGCCCGCTCCGATGTTGGATCCCACGAAGACGGATCCGGCTTGGGATTTTCAGTATTAGAATCAGGGTCGGTTCTCTTCCGCTTTTCCCCCGCAACACCA
GCACCATTGGATTGGCAATCAGATTGGTCCGGTAAAGATTCCGGCGGCAGCGCAGTAGTGAGTTGGAAGGCAGTTTCTAATGAGATGAATTCGGGTTTTTCCGACGTGAC
GTTCCCATTTTTACCGACTCGTCGGAATTTTCGCACACACATCAAATTTTATTTGAGCTTTGTCAAATGGTCAATCAGAACAATTAAATTTGTTTTCCTCACAAAAACTC
CAACATGTTCCTTCACTCCTACTATCTTCCAATCCAAAACGCCATTATTAACTCCTGACTTTGGACACCAAGAACTTAGCACAATAGATTCACCTTCTGGGCCTCTTTGT
CCTCCTACAACCACAAGCTTTTCCCCACAAGCCTTGAAAGCAAGTCCCCATCCATTTGAAGAATCTGCTCTCACTGGAAGTCTCCCCAACACATTCCAAGTGTTCCCCAC
TTTCTCATACTTCATAACCATGTTTGTTAAATGCTCCACTGCATATAGTTCATTCTCCACAACTGCAACTAGAGGAGGAGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCATCACCATCTCACAGTGGGGTGTATGAGGGAAAAGATCTACAGCCATTGCTTTTACAGGCCGAAAAGGCTCGGACATCGGCATGGACTTGACCCGGTGACGAG
CAAGACCAGCACTGCCCATATTCCTCCATCCTCGACGATGGCGTACACAGCTCTATGGCATTTGCCATCAAACTTTCAGGGTTGCATGAAATGTAACTGCGCCAAGGTAC
ATGGTTCACTACAGGATCTTGTTCTTTGTCATCCAAGTGCAAAAACAATTAATAAATCAGGGAAGTCACAATCAGAGTACCTACAAATGAATTGCATGGGAAATGGCTTT
TTGAATATTACCATACCAACACGATGTGCTAAAGTCAGTCCAATTGTTCCAGTTCCACAGCAAATATCAAATAGCAAAGTGTCAGGGCCCAACCCAGCCCAATCCCCAGC
AAGTGAATACAGCTTCTCAGCAGCAAGTTTAGTGGCAATGGCGGTGAATTTGCAACAGATCCTTCAGCAAAAGCTTGAGCAAACATTAACCTGGACAATGAGCATAACCT
CACTGATGCTTGCATCAGAATTATCAGAATCAATCAACTTCCCTGGAGTCCGTCCTTCTCGAACCTTCCATGGTTCACAGAACAGAATTGTCAACAGGAATACACTGGAT
GGAGTAGAACTCCCATCATTTGTGTTAGCAGCATCTTCATCATCATTTGATGTTAAGGAGACAGCCGCCGAAGATACAGAGCTATTATCACAATCCATTGACGATTTAAT
TCATTTACTAAGCCCATTATCCCTTCCGTCATTGCCATCCTCATCGTCGTCGTCAACGACGACCTCCGTCATCATGACCTCCTCTTCCTTAACTTCCTCCCCCACTTTCA
TCACCTTTTTAGCCCGCTCCGATGTTGGATCCCACGAAGACGGATCCGGCTTGGGATTTTCAGTATTAGAATCAGGGTCGGTTCTCTTCCGCTTTTCCCCCGCAACACCA
GCACCATTGGATTGGCAATCAGATTGGTCCGGTAAAGATTCCGGCGGCAGCGCAGTAGTGAGTTGGAAGGCAGTTTCTAATGAGATGAATTCGGGTTTTTCCGACGTGAC
GTTCCCATTTTTACCGACTCGTCGGAATTTTCGCACACACATCAAATTTTATTTGAGCTTTGTCAAATGGTCAATCAGAACAATTAAATTTGTTTTCCTCACAAAAACTC
CAACATGTTCCTTCACTCCTACTATCTTCCAATCCAAAACGCCATTATTAACTCCTGACTTTGGACACCAAGAACTTAGCACAATAGATTCACCTTCTGGGCCTCTTTGT
CCTCCTACAACCACAAGCTTTTCCCCACAAGCCTTGAAAGCAAGTCCCCATCCATTTGAAGAATCTGCTCTCACTGGAAGTCTCCCCAACACATTCCAAGTGTTCCCCAC
TTTCTCATACTTCATAACCATGTTTGTTAAATGCTCCACTGCATATAGTTCATTCTCCACAACTGCAACTAGAGGAGGAGCCTGA
Protein sequenceShow/hide protein sequence
MFHHHLTVGCMREKIYSHCFYRPKRLGHRHGLDPVTSKTSTAHIPPSSTMAYTALWHLPSNFQGCMKCNCAKVHGSLQDLVLCHPSAKTINKSGKSQSEYLQMNCMGNGF
LNITIPTRCAKVSPIVPVPQQISNSKVSGPNPAQSPASEYSFSAASLVAMAVNLQQILQQKLEQTLTWTMSITSLMLASELSESINFPGVRPSRTFHGSQNRIVNRNTLD
GVELPSFVLAASSSSFDVKETAAEDTELLSQSIDDLIHLLSPLSLPSLPSSSSSSTTTSVIMTSSSLTSSPTFITFLARSDVGSHEDGSGLGFSVLESGSVLFRFSPATP
APLDWQSDWSGKDSGGSAVVSWKAVSNEMNSGFSDVTFPFLPTRRNFRTHIKFYLSFVKWSIRTIKFVFLTKTPTCSFTPTIFQSKTPLLTPDFGHQELSTIDSPSGPLC
PPTTTSFSPQALKASPHPFEESALTGSLPNTFQVFPTFSYFITMFVKCSTAYSSFSTTATRGGA