; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G048120 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G048120
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationCiama_Chr02:35973119..35976747
RNA-Seq ExpressionCaUC02G048120
SyntenyCaUC02G048120
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647369.1 hypothetical protein Csa_004264 [Cucumis sativus]1.4e-3474.56Show/hide
Query:  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKH--------HHHRHHHRHEHQHQHRPRHHQ
        R +NNRWRSVPEFGGWDHNAPGASNYSVVF+QARA+RKQQKTDLTEFK+TSLGNE+ELM + DKHHR QKH        HHH HHH H+H H+H+  HHQ
Subjt:  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKH--------HHHRHHHRHEHQHQHRPRHHQ

Query:  HHHQ-PPADDSVVP
        HHHQ PP DDSV P
Subjt:  HHHQ-PPADDSVVP

KAG6605945.1 hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sororia]7.8e-3068.91Show/hide
Query:  QNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEH--QHQHRPRHHQHHHQPPAD
        +NNRW+SVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKR SLGNERE+MA ADKH RQQ HHHHRHH  + H  +++H P+ +QH  +P   
Subjt:  QNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEH--QHQHRPRHHQHHHQPPAD

Query:  DSVVPKLKKICIERSTCWI
        D VVP+ KK  +    C I
Subjt:  DSVVPKLKKICIERSTCWI

XP_022985820.1 dendritic arbor reduction protein 1 isoform X2 [Cucurbita maxima]1.5e-2871.05Show/hide
Query:  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQ-HRPRHHQHHHQPPADDSV
        NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+ELMA ADKH R     HH+HHHR EH+HQ H  RHH HH Q PAD +V
Subjt:  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQ-HRPRHHQHHHQPPADDSV

Query:  VPKLKKICIERSTC
        V K KKI    S C
Subjt:  VPKLKKICIERSTC

XP_038901151.1 lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida]2.1e-3877.05Show/hide
Query:  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHE--HQHQHRPRHHQHH-HQP
        R++ NRWRSVPEFGGWDHNAPGASNYSVVF+QARA+RKQ+KTDLTEFKRTSLGNERELMA+  K HR QKHHHHRHHH HE  HQHQH+ RHH HH HQP
Subjt:  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHE--HQHQHRPRHHQHH-HQP

Query:  PADDSVVPKLKKICIERSTCWI
        PADDSVVP+ KK  +    C I
Subjt:  PADDSVVPKLKKICIERSTCWI

XP_038901152.1 lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida]5.4e-3979.17Show/hide
Query:  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHE--HQHQHRPRHHQHH-HQP
        R++ NRWRSVPEFGGWDHNAPGASNYSVVF+QARA+RKQ+KTDLTEFKRTSLGNERELMA+  K HR QKHHHHRHHH HE  HQHQH+ RHH HH HQP
Subjt:  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHE--HQHQHRPRHHQHH-HQP

Query:  PADDSVVPKLKKICIERSTC
        PADDSVVPK KKI    + C
Subjt:  PADDSVVPKLKKICIERSTC

TrEMBL top hitse value%identityAlignment
A0A0A0KK09 AvrRpt-cleavage domain-containing protein1.6e-3669.53Show/hide
Query:  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKH--------HHHRHHHRHEHQHQHRPRHHQ
        R +NNRWRSVPEFGGWDHNAPGASNYSVVF+QARA+RKQQKTDLTEFK+TSLGNE+ELM + DKHHR QKH        HHH HHH H+H H+H+  HHQ
Subjt:  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKH--------HHHRHHHRHEHQHQHRPRHHQ

Query:  HHHQ-PPADDSVVPKLKKICIERSTCWI
        HHHQ PP DDSV P+ KK  +    C I
Subjt:  HHHQ-PPADDSVVPKLKKICIERSTCWI

A0A6J1DJD7 lateral signaling target protein 2 homolog1.2e-2876.47Show/hide
Query:  QNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQH-RPRHHQHHHQPPADD
        + N WRSVPEFGGWDHNAPGASNYSVVF+QARANRKQQKTDLTEFKR+SLGNERELMA+A      Q+ H H+H HRHEHQ+QH R  HHQHHHQ  ADD
Subjt:  QNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQH-RPRHHQHHHQPPADD

Query:  SV
        S+
Subjt:  SV

A0A6J1FX29 dendritic arbor reduction protein 1 isoform X21.1e-2669.03Show/hide
Query:  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQHRPRHHQHHHQPPADDSVV
        NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+ELMA ADKH R   HH HRH H H  QH H+ RHH HH Q P   +VV
Subjt:  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQHRPRHHQHHHQPPADDSVV

Query:  PKLKKICIERSTC
         K KKI    S C
Subjt:  PKLKKICIERSTC

A0A6J1JCC4 dendritic arbor reduction protein 1 isoform X27.1e-2971.05Show/hide
Query:  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQ-HRPRHHQHHHQPPADDSV
        NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+ELMA ADKH R     HH+HHHR EH+HQ H  RHH HH Q PAD +V
Subjt:  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQ-HRPRHHQHHHQPPADDSV

Query:  VPKLKKICIERSTC
        V K KKI    S C
Subjt:  VPKLKKICIERSTC

A0A6J1JEB9 dendritic arbor reduction protein 1 isoform X13.5e-2868.1Show/hide
Query:  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQ-HRPRHHQHHHQPPADDSV
        NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+ELMA ADKH R     HH+HHHR EH+HQ H  RHH HH Q PAD +V
Subjt:  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQ-HRPRHHQHHHQPPADDSV

Query:  VPKLKKICIERSTCWI
        V + KK  +   +C I
Subjt:  VPKLKKICIERSTCWI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein6.0e-1242.37Show/hide
Query:  RSQNNRWRSVPEFGGWDHNAPG-ASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQHRPRHHQHHHQPPA
        R +N  W  VP+FGGWD   P  A+NYSVVFS+ARANRKQ K  +   + +SLG+E+ELM S  ++H+Q        HHRHE Q                
Subjt:  RSQNNRWRSVPEFGGWDHNAPG-ASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQHRPRHHQHHHQPPA

Query:  DDSVVPKLKKICIERSTC
        DD  V K K+I    + C
Subjt:  DDSVVPKLKKICIERSTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCCATGGAGGAAGGTTTCTTTGGAGCTTGTTTGGGAGATGAGAAACTGCGAGAAAATTCGAAATGCGGGAAATCTCGGAGACGGGGTGATTTGTGCCATTTTAAT
TTGGCAACCAGCTACAGCTAGTTACCTTCTTCATCGAAAATTATCGAAAAATACTAACAATGCATCAGCTCGTTTTAAGCTCGTTTTTGTGACAAGTATTCGATCACAGA
ACAATAGGTGGAGATCTGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCCGGAGCAAGCAATTATTCTGTTGTGTTTTCTCAAGCTCGTGCCAATAGGAAACAGCAA
AAAACTGACTTAACTGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTAATGGCAAGCGCGGATAAGCATCATCGTCAACAAAAACATCACCACCATCGCCATCA
TCACCGCCATGAACACCAACACCAACATCGCCCCCGTCACCACCAACATCATCATCAACCACCTGCAGATGACTCTGTTGTCCCAAAACTGAAGAAAATTTGTATAGAAC
GTAGTACCTGTTGGATACTGAGGCTGAGGAACAGATGCTGTATCTATCCCTTGATGGAGGCATACAAGGAACATAAGGATATTTTACAGTATAAGAAACCAGAAGCAAAA
GAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCCATGGAGGAAGGTTTCTTTGGAGCTTGTTTGGGAGATGAGAAACTGCGAGAAAATTCGAAATGCGGGAAATCTCGGAGACGGGGTGATTTGTGCCATTTTAAT
TTGGCAACCAGCTACAGCTAGTTACCTTCTTCATCGAAAATTATCGAAAAATACTAACAATGCATCAGCTCGTTTTAAGCTCGTTTTTGTGACAAGTATTCGATCACAGA
ACAATAGGTGGAGATCTGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCCGGAGCAAGCAATTATTCTGTTGTGTTTTCTCAAGCTCGTGCCAATAGGAAACAGCAA
AAAACTGACTTAACTGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTAATGGCAAGCGCGGATAAGCATCATCGTCAACAAAAACATCACCACCATCGCCATCA
TCACCGCCATGAACACCAACACCAACATCGCCCCCGTCACCACCAACATCATCATCAACCACCTGCAGATGACTCTGTTGTCCCAAAACTGAAGAAAATTTGTATAGAAC
GTAGTACCTGTTGGATACTGAGGCTGAGGAACAGATGCTGTATCTATCCCTTGATGGAGGCATACAAGGAACATAAGGATATTTTACAGTATAAGAAACCAGAAGCAAAA
GAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGATATGAGACAGAAGCCAATCCACTCCTCTATGTTCTAGTCATATCATGCTGTTTTTCTGAATCTTTTTTTT
ATTATTTTTTACTGGCATGTAAATGTAGATGGGACACGTTCATCATATGGACAATTGCATCAATTTCCCCTTCCCTGCATCTTGTTTAGGTTCTTTAGCTTATAAAACAT
GGAACCTTGCAATTTATTTCTTACTTCATGGAGCAAAACAAGATAAATAAACT
Protein sequenceShow/hide protein sequence
MWPWRKVSLELVWEMRNCEKIRNAGNLGDGVICAILIWQPATASYLLHRKLSKNTNNASARFKLVFVTSIRSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQ
KTDLTEFKRTSLGNERELMASADKHHRQQKHHHHRHHHRHEHQHQHRPRHHQHHHQPPADDSVVPKLKKICIERSTCWILRLRNRCCIYPLMEAYKEHKDILQYKKPEAK
EDSDLHQLLYQALI