; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G048200 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G048200
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRING-type domain-containing protein
Genome locationCiama_Chr02:36039895..36041601
RNA-Seq ExpressionCaUC02G048200
SyntenyCaUC02G048200
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96112.1 E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa]8.6e-8391.53Show/hide
Query:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI
        ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI EEREETYD+PEDDQYY    YEDD+EE EDAYLG SPSLRI
Subjt:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI

Query:  GNRRWGDNGYVRAGRQEARPVLRSEF-AGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
        GNRRWG NGYVRAGRQEARPVLR EF  GPSSSR+PVTK ASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Subjt:  GNRRWGDNGYVRAGRQEARPVLRSEF-AGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

XP_004140197.1 uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus]7.8e-8492.09Show/hide
Query:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI
        ATCILRWASYT+KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I+EEREETYDDPEDDQYY   PYEDD+EE EDAYLG SPSLRI
Subjt:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI

Query:  GNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
        GNRRWG NGYVRAGRQEARPVLR EF GPSSSREPVTK A SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Subjt:  GNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

XP_011657615.1 E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus]7.8e-8492.09Show/hide
Query:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI
        ATCILRWASYT+KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I+EEREETYDDPEDDQYY   PYEDD+EE EDAYLG SPSLRI
Subjt:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI

Query:  GNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
        GNRRWG NGYVRAGRQEARPVLR EF GPSSSREPVTK A SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Subjt:  GNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

XP_038901112.1 uncharacterized protein LOC120088112 isoform X1 [Benincasa hispida]2.3e-8089.77Show/hide
Query:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI
        ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP IVEEREETYDDPEDD+YY   PYEDD+EE EDAYLGVSP+LRI
Subjt:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI

Query:  GNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
        GNRRWG NGYVRAGRQEARPVLR + A PSSSREP     SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Subjt:  GNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

XP_038901113.1 E3 ubiquitin-protein ligase RNF13 isoform X2 [Benincasa hispida]2.3e-8089.77Show/hide
Query:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI
        ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP IVEEREETYDDPEDD+YY   PYEDD+EE EDAYLGVSP+LRI
Subjt:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI

Query:  GNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
        GNRRWG NGYVRAGRQEARPVLR + A PSSSREP     SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Subjt:  GNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

TrEMBL top hitse value%identityAlignment
A0A0A0KK15 RING-type domain-containing protein3.8e-8492.09Show/hide
Query:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI
        ATCILRWASYT+KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I+EEREETYDDPEDDQYY   PYEDD+EE EDAYLG SPSLRI
Subjt:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI

Query:  GNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
        GNRRWG NGYVRAGRQEARPVLR EF GPSSSREPVTK A SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Subjt:  GNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

A0A1S4DXR5 uncharacterized protein LOC1034914763.3e-8091.28Show/hide
Query:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI
        ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI EEREETYD+PEDDQYY    YEDD+EE EDAYLG SPSLRI
Subjt:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI

Query:  GNRRWGDNGYVRAGRQEARPVLRSEF-AGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLA
        GNRRWG NGYVRAGRQEARPVLR EF  GPSSSR+PVTK ASKDKTGRRAKRALKREAADKAAAAKHQEHLA
Subjt:  GNRRWGDNGYVRAGRQEARPVLRSEF-AGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLA

A0A5D3B8D7 E3 ubiquitin-protein ligase RNF13 isoform X24.2e-8391.53Show/hide
Query:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI
        ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLI EEREETYD+PEDDQYY    YEDD+EE EDAYLG SPSLRI
Subjt:  ATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRI

Query:  GNRRWGDNGYVRAGRQEARPVLRSEF-AGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
        GNRRWG NGYVRAGRQEARPVLR EF  GPSSSR+PVTK ASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Subjt:  GNRRWGDNGYVRAGRQEARPVLRSEF-AGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

A0A6J1FXD4 uncharacterized protein LOC1114484319.6e-8088.44Show/hide
Query:  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIG
        TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWY+PLIV++REETYDDPE+     Y PYED +EE E+AYLG SPSLRIG
Subjt:  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIG

Query:  NRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG
        NRRWGDNGYVRAGRQEARPVLR EF+G SSSREP TK ASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG
Subjt:  NRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG

A0A6J1JFP2 uncharacterized protein LOC1114845972.1e-7988.44Show/hide
Query:  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIG
        TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWY+PLIV++REETYDDPE+     Y PYED +EE E+AYLG SPSLRIG
Subjt:  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIG

Query:  NRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG
        NRRWGDNGYVRAGRQEARPVLR EF+G SSSREP TK ASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG
Subjt:  NRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G12310.1 RING/U-box superfamily protein1.9e-4856.91Show/hide
Query:  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYP--YDPYEDDNEEFEDAYLGVSPSLR
        TCILRWASY +KPTCPQCK PF+FL VHR+LDGS+ D+MFEESVCLLLRASW++PL   ER    D+   D   P  Y+  ++D+++ ++ Y+  S SLR
Subjt:  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYP--YDPYEDDNEEFEDAYLGVSPSLR

Query:  IGNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDK-------TGRRAKRALKREAADKA----AAAKHQEHLARFGRK
        +GNRRWGDNG+VRAGRQEARPV      G +S  EP +  + + K       TGRRAKRA+KREAA+KA    AAAKH+  L R GRK
Subjt:  IGNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDK-------TGRRAKRALKREAADKA----AAAKHQEHLARFGRK

AT5G19430.1 RING/U-box superfamily protein4.6e-5060.43Show/hide
Query:  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIG
        TCILRWAS  + PTCPQCKHPF+FL VHR+LDGSI D++FEESVCLLLRASW+ PL V E+        DD   PYD YED++++ ++ YL  S SLRIG
Subjt:  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIG

Query:  NRRWGDNGYVRAGRQEARPVLR-------SEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKA----AAAKHQEHLARFGRK
        NRRWG NG+VR+GRQEARPV R       S  +  SSS EP  K   + + TGRRAKRA+KREAA+KA    AAAKH+ HL R GRK
Subjt:  NRRWGDNGYVRAGRQEARPVLR-------SEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKA----AAAKHQEHLARFGRK

AT5G19430.2 RING/U-box superfamily protein4.6e-5060.43Show/hide
Query:  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIG
        TCILRWAS  + PTCPQCKHPF+FL VHR+LDGSI D++FEESVCLLLRASW+ PL V E+        DD   PYD YED++++ ++ YL  S SLRIG
Subjt:  TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYLGVSPSLRIG

Query:  NRRWGDNGYVRAGRQEARPVLR-------SEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKA----AAAKHQEHLARFGRK
        NRRWG NG+VR+GRQEARPV R       S  +  SSS EP  K   + + TGRRAKRA+KREAA+KA    AAAKH+ HL R GRK
Subjt:  NRRWGDNGYVRAGRQEARPVLR-------SEFAGPSSSREPVTKHA-SKDKTGRRAKRALKREAADKA----AAAKHQEHLARFGRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTACCTATTGTTTTTCCAGCCACTGAAGTATTGGAAATATTTTCCTTTGCGACTTGCATCCTTCGATGGGCCTCATACACTCAAAAACCGACTTGTCCACAATG
TAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCATGACTATATGTTCGAGGAGAGTGTATGCCTGCTTTTGAGAGCTTCGTGGTACAAAC
CACTGATCGTTGAAGAGCGGGAGGAAACCTATGATGATCCTGAGGACGATCAATACTATCCTTATGATCCTTATGAGGATGACAATGAAGAGTTTGAGGATGCTTACCTG
GGTGTATCACCAAGTCTCCGTATCGGAAATCGAAGGTGGGGAGACAATGGATACGTGAGGGCAGGTCGACAAGAAGCCCGACCAGTTCTTAGGTCTGAGTTTGCTGGACC
TAGTTCATCGAGGGAGCCTGTAACGAAACATGCTTCCAAAGATAAAACAGGTCGACGAGCTAAAAGGGCCCTGAAACGGGAAGCTGCTGATAAAGCAGCAGCAGCTAAGC
ATCAAGAACATCTGGCTAGGTTTGGCCGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTACCTATTGTTTTTCCAGCCACTGAAGTATTGGAAATATTTTCCTTTGCGACTTGCATCCTTCGATGGGCCTCATACACTCAAAAACCGACTTGTCCACAATG
TAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCATGACTATATGTTCGAGGAGAGTGTATGCCTGCTTTTGAGAGCTTCGTGGTACAAAC
CACTGATCGTTGAAGAGCGGGAGGAAACCTATGATGATCCTGAGGACGATCAATACTATCCTTATGATCCTTATGAGGATGACAATGAAGAGTTTGAGGATGCTTACCTG
GGTGTATCACCAAGTCTCCGTATCGGAAATCGAAGGTGGGGAGACAATGGATACGTGAGGGCAGGTCGACAAGAAGCCCGACCAGTTCTTAGGTCTGAGTTTGCTGGACC
TAGTTCATCGAGGGAGCCTGTAACGAAACATGCTTCCAAAGATAAAACAGGTCGACGAGCTAAAAGGGCCCTGAAACGGGAAGCTGCTGATAAAGCAGCAGCAGCTAAGC
ATCAAGAACATCTGGCTAGGTTTGGCCGGAAATGATTTTATGTTTAAAGCTCCTGTATAGAATAAGCTCTGCTCTTTTCCCTTTGTACAGTTCTAAGATTCAACTTTGTA
TAAACATTGAATCTCAAATTCAATCATAAAAGAATTGTTAGCAGCTAGCATCTAGTTTCATGTAATATAACTTTTCAAAACTCTAGACTCAAACTTAGCTCCACTATATC
CATTGAACTAACTTAACTTGGCTGATGAACATGTTTTATGTGCTGTTATTATAGCAACTTATTGAGCATCTAATAAAATTTATCTTTTCAGGATGAGCCATTGAAGAGGA
CTGGGTCGAGTTGGGGGAGGTTTTTCTGGACCAACTCGAACCCATTCACAATCTTATTCTTGAGGATATGGGAACTGAAAGAAGGCAAAGAAAAGAAGACCAACAGCAAC
GACTTGCTGTAACTGTAAGGGGAAGTCTTTTGCCTTTTGATGTCTATCAATATGGGTTGGTGGCTAAAAGTAAATCCTAAGTTTAAACTATTTATTCAGACTAAAATGGT
TAATACTCGAATTGCTATTATAATCTTTTGAGAACCAATTCAGTGCTTCGAACACTCTTTGAAGTTTAAAAAATTGTTCCAACCGTTTGTAGATATGTTTGTCTCATGTT
ATCA
Protein sequenceShow/hide protein sequence
MGLPIVFPATEVLEIFSFATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIVEEREETYDDPEDDQYYPYDPYEDDNEEFEDAYL
GVSPSLRIGNRRWGDNGYVRAGRQEARPVLRSEFAGPSSSREPVTKHASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK