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CaUC02G048210 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G048210
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRING-type domain-containing protein
Genome locationCiama_Chr02:36042552..36044180
RNA-Seq ExpressionCaUC02G048210
SyntenyCaUC02G048210
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140197.1 uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus]7.8e-1695.56Show/hide
Query:  DSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        D LEMGKKVEIQGTG+GSHDGACAICLNKIALQETALVRGCEHAY
Subjt:  DSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
XP_011657615.1 E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus]7.8e-1695.56Show/hide
Query:  DSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        D LEMGKKVEIQGTG+GSHDGACAICLNKIALQETALVRGCEHAY
Subjt:  DSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
XP_022153003.1 uncharacterized protein LOC111020607 [Momordica charantia]5.9e-1686Show/hide
Query:  ELHIYDSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        EL I D +++GKKVEIQGTG+GSHDGACAICLNKIALQETALVRGCEHAY
Subjt:  ELHIYDSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
XP_038901112.1 uncharacterized protein LOC120088112 isoform X1 [Benincasa hispida]3.0e-1578.18Show/hide
Query:  SIRKLELHIYDSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        SI+ +   + + LEMGKKVEIQ TG+GSHDGACAICLNKIALQETALVRGCEHAY
Subjt:  SIRKLELHIYDSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
XP_038901113.1 E3 ubiquitin-protein ligase RNF13 isoform X2 [Benincasa hispida]3.0e-1578.18Show/hide
Query:  SIRKLELHIYDSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        SI+ +   + + LEMGKKVEIQ TG+GSHDGACAICLNKIALQETALVRGCEHAY
Subjt:  SIRKLELHIYDSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
TrEMBL top hitse value%identityAlignment
A0A0A0KK15 RING-type domain-containing protein3.8e-1695.56Show/hide
Query:  DSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        D LEMGKKVEIQGTG+GSHDGACAICLNKIALQETALVRGCEHAY
Subjt:  DSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
A0A5A7V3C1 E3 ubiquitin-protein ligase RNF13 isoform X21.9e-1597.67Show/hide
Query:  LEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        LEMGKKVEIQGTG+GSHDGACAICLNKIALQETALVRGCEHAY
Subjt:  LEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
A0A5D3B8D7 E3 ubiquitin-protein ligase RNF13 isoform X21.9e-1597.67Show/hide
Query:  LEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        LEMGKKVEIQGTG+GSHDGACAICLNKIALQETALVRGCEHAY
Subjt:  LEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
A0A6J1DGD3 uncharacterized protein LOC1110206072.9e-1686Show/hide
Query:  ELHIYDSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        EL I D +++GKKVEIQGTG+GSHDGACAICLNKIALQETALVRGCEHAY
Subjt:  ELHIYDSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
A0A6J1H396 uncharacterized protein LOC1114596091.9e-1583.67Show/hide
Query:  LHIYDSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        L + + +EMGKKVEIQGTG+GSHDG CAICLNKIALQETALVRGCEHAY
Subjt:  LHIYDSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G12310.1 RING/U-box superfamily protein3.2e-0772.41Show/hide
Query:  GSHDGACAICLNKIALQETALVRGCEHAY
        G+H G CAICL+ I LQETA+V+GCEHAY
Subjt:  GSHDGACAICLNKIALQETALVRGCEHAY
AT5G19430.1 RING/U-box superfamily protein1.8e-0761.11Show/hide
Query:  EIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        EI     G+H G CAICL++I LQETA+V+GCEH Y
Subjt:  EIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
AT5G19430.2 RING/U-box superfamily protein1.8e-0761.11Show/hide
Query:  EIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY
        EI     G+H G CAICL++I LQETA+V+GCEH Y
Subjt:  EIQGTGNGSHDGACAICLNKIALQETALVRGCEHAY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGACTTCAAATACACAACTTTTGATTTTCTCGTCAAGAACTCCTGGATCGCGAGTAGAGAATATTCTCGAGCATCCTTTCTTTTCTTCCGGTTCAGAATAATTCT
TCAGCATCTTCTTTCTTTTCAAGTTTTGATTTTTGCTGAACGACTATTTGGGTTCTGTGTAATTTGGAGCGAGAAAGATCGGAGGAGAAACCCTCGTGTACTCGCTATGT
CTTCTTCCGGAATCTCTACCCAAAGCTCCGAATTGTCAGATGCCGTTCAAGAACTAGTAATTTGCGAGCAGGTTTCTTTCTATCTATTCATTTTCGAAGTTGATCTACTT
TCACGTACTTTCTTTCTCCAAGAGAATCAGGGGCGTAAAACTTTGCGTAAGAAATGGTTGTCTTCAATTTGTGTTGATAGTTCTTATCGGAAGTATTGTATTCTCAAATC
TGATTTAGTACTGTTTTCATCTGTTTTTCAAGATTTGCGTTTATTGGGGACCGTGGGTTGTGTGCTTGGTTGTATGGCTATGAGGAATCATAACAAGCAGAAGGTATTGT
TTGTGTTGATCCGTTTGCCAGTAATTGGATTGCTGTTGTTTTTCTTTTGCGAATATGGCTGGTCGCCTGTGCATGCTTTTCTTTATTCTATAAGGAAGTTAGAGTTGCAT
ATCTATGATTCTTTGGAAATGGGAAAGAAGGTAGAGATTCAAGGAACGGGGAATGGGAGTCATGATGGGGCTTGTGCAATTTGCTTAAATAAGATAGCACTTCAAGAAAC
TGCTTTAGTGAGAGGCTGCGAGCACGCTTATTGGTTTGTTCCAATTGATTCATCTTTCATATACTTATTAATATTTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGACTTCAAATACACAACTTTTGATTTTCTCGTCAAGAACTCCTGGATCGCGAGTAGAGAATATTCTCGAGCATCCTTTCTTTTCTTCCGGTTCAGAATAATTCT
TCAGCATCTTCTTTCTTTTCAAGTTTTGATTTTTGCTGAACGACTATTTGGGTTCTGTGTAATTTGGAGCGAGAAAGATCGGAGGAGAAACCCTCGTGTACTCGCTATGT
CTTCTTCCGGAATCTCTACCCAAAGCTCCGAATTGTCAGATGCCGTTCAAGAACTAGTAATTTGCGAGCAGGTTTCTTTCTATCTATTCATTTTCGAAGTTGATCTACTT
TCACGTACTTTCTTTCTCCAAGAGAATCAGGGGCGTAAAACTTTGCGTAAGAAATGGTTGTCTTCAATTTGTGTTGATAGTTCTTATCGGAAGTATTGTATTCTCAAATC
TGATTTAGTACTGTTTTCATCTGTTTTTCAAGATTTGCGTTTATTGGGGACCGTGGGTTGTGTGCTTGGTTGTATGGCTATGAGGAATCATAACAAGCAGAAGGTATTGT
TTGTGTTGATCCGTTTGCCAGTAATTGGATTGCTGTTGTTTTTCTTTTGCGAATATGGCTGGTCGCCTGTGCATGCTTTTCTTTATTCTATAAGGAAGTTAGAGTTGCAT
ATCTATGATTCTTTGGAAATGGGAAAGAAGGTAGAGATTCAAGGAACGGGGAATGGGAGTCATGATGGGGCTTGTGCAATTTGCTTAAATAAGATAGCACTTCAAGAAAC
TGCTTTAGTGAGAGGCTGCGAGCACGCTTATTGGTTTGTTCCAATTGATTCATCTTTCATATACTTATTAATATTTTTATAG
Protein sequenceShow/hide protein sequence
MMDFKYTTFDFLVKNSWIASREYSRASFLFFRFRIILQHLLSFQVLIFAERLFGFCVIWSEKDRRRNPRVLAMSSSGISTQSSELSDAVQELVICEQVSFYLFIFEVDLL
SRTFFLQENQGRKTLRKKWLSSICVDSSYRKYCILKSDLVLFSSVFQDLRLLGTVGCVLGCMAMRNHNKQKVLFVLIRLPVIGLLLFFFCEYGWSPVHAFLYSIRKLELH
IYDSLEMGKKVEIQGTGNGSHDGACAICLNKIALQETALVRGCEHAYWFVPIDSSFIYLLIFL