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CaUC02G048390 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G048390
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionABC transporter-like
Genome locationCiama_Chr02:36241221..36241532
RNA-Seq ExpressionCaUC02G048390
SyntenyCaUC02G048390
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR003439 - ABC transporter-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33920.1 white-brown-complex ABC transporter family protein [Cucumis melo subsp. melo]3.9e-3492.77Show/hide
Query:  MEIEAAGGSHSRGGG--DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        MEIE AGGSH+ G G  DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
Subjt:  MEIEAAGGSHSRGGG--DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

XP_008449695.1 PREDICTED: ABC transporter G family member 15-like [Cucumis melo]3.9e-3492.77Show/hide
Query:  MEIEAAGGSHSRGGG--DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        MEIE AGGSH+ G G  DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
Subjt:  MEIEAAGGSHSRGGG--DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

XP_011657633.1 ABC transporter G family member 15 [Cucumis sativus]6.7e-3493.9Show/hide
Query:  MEIEAAGGSHSRG-GGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        MEIE AGGSHS G  GDGLRRGEERGTYLVWEDLTVVLPNF+DGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
Subjt:  MEIEAAGGSHSRG-GGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

XP_023532835.1 ABC transporter G family member 15-like [Cucurbita pepo subsp. pepo]2.2e-3287.65Show/hide
Query:  MEIEAAGGSHSRGGGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        MEIE AGG+HS    +GLRRGE+RGTYLVWEDLTVVLPNF DGPTKR+LNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
Subjt:  MEIEAAGGSHSRGGGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

XP_038900977.1 ABC transporter G family member 15-like [Benincasa hispida]2.8e-3279.59Show/hide
Query:  MEIEAAGGSHSRGGGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAGPSSLSLSINLYACTFFS
        MEIEA GGSHS  GGD LRRG+ERGTYLVWEDLTVVLPNF+D PTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG   LS ++ +    FF+
Subjt:  MEIEAAGGSHSRGGGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAGPSSLSLSINLYACTFFS

TrEMBL top hitse value%identityAlignment
A0A0A0KK34 ABC transporter domain-containing protein3.2e-3493.9Show/hide
Query:  MEIEAAGGSHSRG-GGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        MEIE AGGSHS G  GDGLRRGEERGTYLVWEDLTVVLPNF+DGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
Subjt:  MEIEAAGGSHSRG-GGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

A0A1S3BMM2 ABC transporter G family member 15-like1.9e-3492.77Show/hide
Query:  MEIEAAGGSHSRGGG--DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        MEIE AGGSH+ G G  DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
Subjt:  MEIEAAGGSHSRGGG--DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

A0A5A7V2I4 ABC transporter G family member 15-like1.9e-3492.77Show/hide
Query:  MEIEAAGGSHSRGGG--DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        MEIE AGGSH+ G G  DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
Subjt:  MEIEAAGGSHSRGGG--DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

A0A6J1FWY8 ABC transporter G family member 15-like3.4e-3190.79Show/hide
Query:  AGGSHSRGGGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        AGG+HS    D LRRGEERGTYLVWEDLTV+LPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
Subjt:  AGGSHSRGGGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

E5GBS8 White-brown-complex ABC transporter family protein1.9e-3492.77Show/hide
Query:  MEIEAAGGSHSRGGG--DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        MEIE AGGSH+ G G  DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
Subjt:  MEIEAAGGSHSRGGG--DGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

SwissProt top hitse value%identityAlignment
H9BZ66 ABC transporter G family member 14.0e-1363.16Show/hide
Query:  GTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        G +L WEDL V   +  DG +K +L GL GYA PG ++AIMGPSGSGKSTLLDT+AG
Subjt:  GTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

Q8RWI9 ABC transporter G family member 151.2e-2284.48Show/hide
Query:  RGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        RG YL WEDLTVV+PNF+DGPT+RLL  L GYAEPGRIMAIMGPSGSGKSTLLD+LAG
Subjt:  RGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

Q8RXN0 ABC transporter G family member 119.8e-1262.26Show/hide
Query:  LVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLA
        L W+DLTV++    DG T+ +L GL GYAEPG + A+MGPSGSGKST+LD LA
Subjt:  LVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLA

Q9C8J8 ABC transporter G family member 131.8e-1872.88Show/hide
Query:  ERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        E   Y+ WEDLTVV+PNF +G TKRLLNG+ G  EP RI+AIMGPSGSGKSTLLD LAG
Subjt:  ERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

Q9C8K2 ABC transporter G family member 122.7e-2282.76Show/hide
Query:  RGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        RG YL WEDLTVV+PNF+ GPT+RLL+GL G+AEPGRIMAIMGPSGSGKSTLLD+LAG
Subjt:  RGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

Arabidopsis top hitse value%identityAlignment
AT1G17840.1 white-brown complex homolog protein 116.9e-1362.26Show/hide
Query:  LVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLA
        L W+DLTV++    DG T+ +L GL GYAEPG + A+MGPSGSGKST+LD LA
Subjt:  LVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLA

AT1G51460.1 ABC-2 type transporter family protein1.3e-1972.88Show/hide
Query:  ERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        E   Y+ WEDLTVV+PNF +G TKRLLNG+ G  EP RI+AIMGPSGSGKSTLLD LAG
Subjt:  ERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

AT1G51500.1 ABC-2 type transporter family protein1.9e-2382.76Show/hide
Query:  RGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        RG YL WEDLTVV+PNF+ GPT+RLL+GL G+AEPGRIMAIMGPSGSGKSTLLD+LAG
Subjt:  RGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG

AT2G01320.2 ABC-2 type transporter family protein1.1e-1045.57Show/hide
Query:  GGGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAGPSSLSLSINL
        GGGD +R    R     W ++T  L + +    + LL  + G A+PGR++AIMGPSGSGK+TLL+ LAG  SLS  ++L
Subjt:  GGGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAGPSSLSLSINL

AT3G21090.1 ABC-2 type transporter family protein8.8e-2484.48Show/hide
Query:  RGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG
        RG YL WEDLTVV+PNF+DGPT+RLL  L GYAEPGRIMAIMGPSGSGKSTLLD+LAG
Subjt:  RGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTGAGGCCGCCGGAGGAAGCCATAGCCGCGGCGGCGGCGATGGGTTGCGACGCGGCGAAGAGCGAGGGACTTACCTTGTGTGGGAGGATCTCACGGTGGTGCT
TCCTAATTTCACCGATGGCCCCACCAAAAGGCTCCTAAATGGCCTCCGTGGCTACGCCGAGCCCGGCCGGATTATGGCCATCATGGGCCCTTCCGGCTCCGGCAAATCCA
CCCTTCTTGATACTCTTGCAGGTCCTTCTTCTCTCTCTCTCTCTATAAATTTATATGCATGCACTTTCTTTTCCCTCTTTTGTACTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTGAGGCCGCCGGAGGAAGCCATAGCCGCGGCGGCGGCGATGGGTTGCGACGCGGCGAAGAGCGAGGGACTTACCTTGTGTGGGAGGATCTCACGGTGGTGCT
TCCTAATTTCACCGATGGCCCCACCAAAAGGCTCCTAAATGGCCTCCGTGGCTACGCCGAGCCCGGCCGGATTATGGCCATCATGGGCCCTTCCGGCTCCGGCAAATCCA
CCCTTCTTGATACTCTTGCAGGTCCTTCTTCTCTCTCTCTCTCTATAAATTTATATGCATGCACTTTCTTTTCCCTCTTTTGTACTTACTAG
Protein sequenceShow/hide protein sequence
MEIEAAGGSHSRGGGDGLRRGEERGTYLVWEDLTVVLPNFTDGPTKRLLNGLRGYAEPGRIMAIMGPSGSGKSTLLDTLAGPSSLSLSINLYACTFFSLFCTY