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CaUC02G048490 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G048490
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR13
Genome locationCiama_Chr02:36336878..36338864
RNA-Seq ExpressionCaUC02G048490
SyntenyCaUC02G048490
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010272.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4484.17Show/hide
Query:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQNQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFF
        MAPS   MA RTR NLPNLKL KKIKKTKKQQQQK  QIPAA  ND V FTDD +DIDGGCSTPKAER RIPEILTCPPAPKKPRP SDCS RRSPIAFF
Subjt:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQNQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFF

Query:  APPELELFFFVALPVPDISV
        APPELEL FF ALPVPDISV
Subjt:  APPELELFFFVALPVPDISV

XP_022944116.1 cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita moschata]1.0e-4281.3Show/hide
Query:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQ---NQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPI
        MAPS   MA RTR NLPNLKL KKIKKTKKQQQQ+Q    QIPAA  ND V FTDD +DIDGGCSTPKAER RIP+ILTCPPAPKKPRP SDCS RRSPI
Subjt:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQ---NQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPI

Query:  AFFAPPELELFFFVALPVPDISV
        AFFAPPELEL FF ALPVPDISV
Subjt:  AFFAPPELELFFFVALPVPDISV

XP_022986710.1 cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima]2.5e-4482.93Show/hide
Query:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQ---NQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPI
        MAPS   MA RTR NLPNLKL KKIKKTKKQQQQ+Q    QIPA   ND V FTDDCSDIDGGCSTPKAER RIPEILTCPPAPKKPRP SDCS RRSPI
Subjt:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQ---NQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPI

Query:  AFFAPPELELFFFVALPVPDISV
        AFFAPPELEL FF ALPVPDISV
Subjt:  AFFAPPELELFFFVALPVPDISV

XP_023522908.1 cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo]1.0e-4282.64Show/hide
Query:  MAPSVATMAARTRRNLPNLKLTKKIKKTKK-QQQQKQNQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAF
        MAPS   MA RTR NLPNLKL KKIKKTKK QQQQK  QIPA   ND V FTDD +DIDGGCSTPKAER RIPEILTCPPAPKKPRP SDCS RRSPIAF
Subjt:  MAPSVATMAARTRRNLPNLKLTKKIKKTKK-QQQQKQNQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAF

Query:  FAPPELELFFFVALPVPDISV
        FAPPELEL FF ALPVPDISV
Subjt:  FAPPELELFFFVALPVPDISV

XP_038902266.1 cyclin-dependent protein kinase inhibitor SMR13 [Benincasa hispida]2.8e-4891.15Show/hide
Query:  MAARTRRNLPNLKLTKKIKKTKKQQQQKQNQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELEL
        MA RTRRNLPNLKLTKKIKKTKKQQQ  QNQIPA  +NDIVQFTD+CSD DGGCSTPKAERHRIPEILTCPPAPKKPR VSDCSFRRSPIAFFAPPELEL
Subjt:  MAARTRRNLPNLKLTKKIKKTKKQQQQKQNQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELEL

Query:  FFFVALPVPDISV
        FFFV+LPVPDISV
Subjt:  FFFVALPVPDISV

TrEMBL top hitse value%identityAlignment
A0A0A0L0Q1 Uncharacterized protein1.5e-3979.67Show/hide
Query:  MAPSVATMAAR-TRRNLPNLKLTKKIKKT--KKQQQQKQNQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPI
        MAPS A MA R TRR LPNLKLTKKIKKT  KKQ  QK        +NDIV+F D+CS  DGGCSTPKAERHRIPEILTCPPAPKKPR VSDCS RRSPI
Subjt:  MAPSVATMAAR-TRRNLPNLKLTKKIKKT--KKQQQQKQNQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPI

Query:  AFFAPPELELFFFVALPVPDISV
        AFFAPPELELFFFVALPVPDISV
Subjt:  AFFAPPELELFFFVALPVPDISV

A0A6J1D3Z6 cyclin-dependent protein kinase inhibitor SMR15-like4.3e-3476.52Show/hide
Query:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQNQIPA-AARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAF
        MAPS   MAARTR N  +LKL KK+KKTKKQQQQK   +PA A  ND+VQ ++D  DIDGGCSTP+AER RIPEI+TCPPAPKK RPVSDCSFRRSPIAF
Subjt:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQNQIPA-AARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAF

Query:  FAPPELELFFFVALP
        FAPPELELFFF ALP
Subjt:  FAPPELELFFFVALP

A0A6J1FTJ6 cyclin-dependent protein kinase inhibitor SMR135.0e-4381.3Show/hide
Query:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQ---NQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPI
        MAPS   MA RTR NLPNLKL KKIKKTKKQQQQ+Q    QIPAA  ND V FTDD +DIDGGCSTPKAER RIP+ILTCPPAPKKPRP SDCS RRSPI
Subjt:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQ---NQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPI

Query:  AFFAPPELELFFFVALPVPDISV
        AFFAPPELEL FF ALPVPDISV
Subjt:  AFFAPPELELFFFVALPVPDISV

A0A6J1JET4 cyclin-dependent protein kinase inhibitor SMR131.2e-4482.93Show/hide
Query:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQ---NQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPI
        MAPS   MA RTR NLPNLKL KKIKKTKKQQQQ+Q    QIPA   ND V FTDDCSDIDGGCSTPKAER RIPEILTCPPAPKKPRP SDCS RRSPI
Subjt:  MAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQ---NQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPI

Query:  AFFAPPELELFFFVALPVPDISV
        AFFAPPELEL FF ALPVPDISV
Subjt:  AFFAPPELELFFFVALPVPDISV

A0A6J1K7R4 cyclin-dependent protein kinase inhibitor SMR9-like5.2e-3271.79Show/hide
Query:  MAARTRRNLPNLKLTKKIKK-TKKQQQQKQNQIPAAARNDIVQFTD---DCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPP
        MA R RRN+PN KL KK+KK T K+ QQ QNQIP   +ND+VQF D   D  D+ GG STPKAER RIPEILTCPP PKK RPVSDCSFRRSPIAFFAPP
Subjt:  MAARTRRNLPNLKLTKKIKK-TKKQQQQKQNQIPAAARNDIVQFTD---DCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPP

Query:  ELELFFFVALPVPDISV
        ELELFFF++   PDISV
Subjt:  ELELFFFVALPVPDISV

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR131.1e-1368.63Show/hide
Query:  GGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF
        GGC TPKA++ RIPE+LTCPPAPKK R   +C  RR  I FFAPPE+ELFF
Subjt:  GGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF

Q29Q81 Cyclin-dependent protein kinase inhibitor SMR66.9e-0543.28Show/hide
Query:  IVQFTDDCSDIDGGCS-TPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIA--FFAPP-ELELFF
        + +  +DC + +  CS TP A+  +IPE+L CPPAP+K RP   C   RS +   FF PP +LE  F
Subjt:  IVQFTDDCSDIDGGCS-TPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIA--FFAPP-ELELFF

Q3ECS5 Cyclin-dependent protein kinase inhibitor SMR91.4e-1039.62Show/hide
Query:  KKIKKTKKQQQQK---QNQIPAAARNDIVQFTDDCS------------DIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELEL
        K +++T  +++++   +N  P  + N  V  T   S              + GC TP  E+ RIPE+LTCPPAPKK +   +C+ RR  IAFFAPP++EL
Subjt:  KKIKKTKKQQQQK---QNQIPAAARNDIVQFTDDCS------------DIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELEL

Query:  FFFVAL
        FF  AL
Subjt:  FFFVAL

Arabidopsis top hitse value%identityAlignment
AT1G10690.1 unknown protein2.0e-0443.75Show/hide
Query:  STPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF
        +TP A   RIP +  CP APKK +P   CS+      +F+PP+LE  F
Subjt:  STPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF

AT1G51355.1 unknown protein1.0e-1139.62Show/hide
Query:  KKIKKTKKQQQQK---QNQIPAAARNDIVQFTDDCS------------DIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELEL
        K +++T  +++++   +N  P  + N  V  T   S              + GC TP  E+ RIPE+LTCPPAPKK +   +C+ RR  IAFFAPP++EL
Subjt:  KKIKKTKKQQQQK---QNQIPAAARNDIVQFTDDCS------------DIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELEL

Query:  FFFVAL
        FF  AL
Subjt:  FFFVAL

AT1G60783.1 unknown protein1.2e-0445.83Show/hide
Query:  STPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF
        +TP A+  RIP ++ CPPAPKK +     S+   P  FF+PP+LE  F
Subjt:  STPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF

AT3G20898.1 unknown protein7.5e-1568.63Show/hide
Query:  GGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF
        GGC TPKA++ RIPE+LTCPPAPKK R   +C  RR  I FFAPPE+ELFF
Subjt:  GGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELFF

AT5G40460.1 unknown protein4.9e-0643.28Show/hide
Query:  IVQFTDDCSDIDGGCS-TPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIA--FFAPP-ELELFF
        + +  +DC + +  CS TP A+  +IPE+L CPPAP+K RP   C   RS +   FF PP +LE  F
Subjt:  IVQFTDDCSDIDGGCS-TPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIA--FFAPP-ELELFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTAGAAGTGAATAGGAGAGCTAAGTTTGTTTTGTGTGCTTATGGTAACCATACATTCTCTGTACTTTCCAGGACCATTGTTTGCCAGTCGAGCATGTCGTTTCG
CTCTCGACTGCATGAATTTGTGAAAAGAATTTGGTTAATTGAAGGATTTTCTTATGATAAAGTTGAAAAGATGAAATTGCGGGTAGCTCCCTGCCCTGATTTTAACTCAT
CAAAATTAGCAGGTTTTGTGGAACAAATCCCTTCTAAAGCTTCAGTCTTTCGCAGAACCCCTCTGTTTTTCTCTTTCAGTAAAAAATCCCTCTGTTTCAAACAGAGTTTA
TTGAAAATGGCCCCTTCCGTAGCAACAATGGCCGCAAGAACCAGAAGAAATTTACCCAACTTGAAGCTGACTAAGAAAATCAAAAAGACGAAGAAACAACAGCAGCAGAA
GCAGAACCAGATTCCGGCTGCCGCACGAAACGACATCGTTCAATTCACCGACGACTGTTCTGACATCGACGGCGGTTGCAGCACTCCAAAAGCAGAGAGACACAGAATAC
CGGAGATTCTGACGTGTCCGCCGGCGCCGAAGAAACCAAGACCCGTTTCCGATTGCTCATTCCGACGATCACCTATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTC
TTCTTCGTCGCGTTGCCGGTGCCGGACATTTCAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTAGAAGTGAATAGGAGAGCTAAGTTTGTTTTGTGTGCTTATGGTAACCATACATTCTCTGTACTTTCCAGGACCATTGTTTGCCAGTCGAGCATGTCGTTTCG
CTCTCGACTGCATGAATTTGTGAAAAGAATTTGGTTAATTGAAGGATTTTCTTATGATAAAGTTGAAAAGATGAAATTGCGGGTAGCTCCCTGCCCTGATTTTAACTCAT
CAAAATTAGCAGGTTTTGTGGAACAAATCCCTTCTAAAGCTTCAGTCTTTCGCAGAACCCCTCTGTTTTTCTCTTTCAGTAAAAAATCCCTCTGTTTCAAACAGAGTTTA
TTGAAAATGGCCCCTTCCGTAGCAACAATGGCCGCAAGAACCAGAAGAAATTTACCCAACTTGAAGCTGACTAAGAAAATCAAAAAGACGAAGAAACAACAGCAGCAGAA
GCAGAACCAGATTCCGGCTGCCGCACGAAACGACATCGTTCAATTCACCGACGACTGTTCTGACATCGACGGCGGTTGCAGCACTCCAAAAGCAGAGAGACACAGAATAC
CGGAGATTCTGACGTGTCCGCCGGCGCCGAAGAAACCAAGACCCGTTTCCGATTGCTCATTCCGACGATCACCTATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTC
TTCTTCGTCGCGTTGCCGGTGCCGGACATTTCAGTCTGA
Protein sequenceShow/hide protein sequence
MELEVNRRAKFVLCAYGNHTFSVLSRTIVCQSSMSFRSRLHEFVKRIWLIEGFSYDKVEKMKLRVAPCPDFNSSKLAGFVEQIPSKASVFRRTPLFFSFSKKSLCFKQSL
LKMAPSVATMAARTRRNLPNLKLTKKIKKTKKQQQQKQNQIPAAARNDIVQFTDDCSDIDGGCSTPKAERHRIPEILTCPPAPKKPRPVSDCSFRRSPIAFFAPPELELF
FFVALPVPDISV